| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917196
Identifier: 220917196
GI number: 220917196
Start: 2333455
End: 2334237
Strand: Direct
Name: 220917196
Synonym: A2cp1_2093
Alternate gene names: NA
Gene position: 2333455-2334237 (Clockwise)
Preceding gene: 220917195
Following gene: 220917199
Centisome position: 46.4
GC content: 78.93
Gene sequence:
>783_bases ATGACCGCCCGCACCCTTCATCCCCTCCGCCTCGCCGTCGCCCTCGCGGCGCTGACCGCCTCGCCCTCCGCGTCGCCGGC TGCCTCCGGCGATCGCGCCGCCGCGTCCGCCCGGGCGCGCGCCGCCGCCGCGCTCGCCGCCCCGGTGTCGCCCGCGGAGG TGGCCGCGCTCGCCGCGCCCGAGCCCGCCTCGACGCCGGCCGACTACCGCGCGCGCAAGGTGACGCTCCACGTCCTCGGC GTCCAGCAGCCCGGCACGCCCGGGGCGTTCGCCACCGTCGCCGACGTCGCCACCTGGGAGACCCGCGACGTCCGCGTGGG CGACGCCATCGGCCGCAACCTGGTCGTCCGCGCCATCGCGGCGGACGGCGTGGTGACCGCGGAGGGCGCGCGCGAGGTCC GGCTCGAGGTCGGGCGGGACGTGGCGGTGCGCGTGGTCGAGCACGCGTTCGACGCCGCGGCGACCCCGCGCGGCGCGCAC GACCTCGACGTGGATCCGGCCGTCCTGGCGCGCCTGCGCGGCGCCCACGGGACCGGCGCCACCGGCGAGGTCGTGGTCAT CGACCAGCCCGCGGTGAAGCTCACCGCCGTCGATCCGCGGGGGGTGCTCGCGCACCTCGGCCTCCGGCAGGGCGATCTCC TCTGGCGCTTCGACGGGCAGCCGGTGGGCCCGGCCGACCTCGATCGGATCGCGACCGCAGTCGCCACGCCGGGGAGCGGC GTGCACGCGCTCGACGTGACCCGCAACGGCGCGGCGTTCACCGTGTCGTACTACCCGCGGTGA
Upstream 100 bases:
>100_bases CGCACGCTCGCCTGCGCCACCTGGGCGTCGTGGGAGTCGGTCGCTCTCGGCGGCTCGGGCGACGAGGCAGGCTGCTTCCT GCAGTGAACCGAGGCCCGCC
Downstream 100 bases:
>100_bases CGCGCGGCGGCGTCCCGCGCTCGCGGCGGGCCGATCCCGGGCGCCGGCGCCGGCCTAGCGCTCCTTCCAGGTGGGCGCAC GCTTCTCCAGGAACGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTARTLHPLRLAVALAALTASPSASPAASGDRAAASARARAAAALAAPVSPAEVAALAAPEPASTPADYRARKVTLHVLG VQQPGTPGAFATVADVATWETRDVRVGDAIGRNLVVRAIAADGVVTAEGAREVRLEVGRDVAVRVVEHAFDAAATPRGAH DLDVDPAVLARLRGAHGTGATGEVVVIDQPAVKLTAVDPRGVLAHLGLRQGDLLWRFDGQPVGPADLDRIATAVATPGSG VHALDVTRNGAAFTVSYYPR
Sequences:
>Translated_260_residues MTARTLHPLRLAVALAALTASPSASPAASGDRAAASARARAAAALAAPVSPAEVAALAAPEPASTPADYRARKVTLHVLG VQQPGTPGAFATVADVATWETRDVRVGDAIGRNLVVRAIAADGVVTAEGAREVRLEVGRDVAVRVVEHAFDAAATPRGAH DLDVDPAVLARLRGAHGTGATGEVVVIDQPAVKLTAVDPRGVLAHLGLRQGDLLWRFDGQPVGPADLDRIATAVATPGSG VHALDVTRNGAAFTVSYYPR >Mature_259_residues TARTLHPLRLAVALAALTASPSASPAASGDRAAASARARAAAALAAPVSPAEVAALAAPEPASTPADYRARKVTLHVLGV QQPGTPGAFATVADVATWETRDVRVGDAIGRNLVVRAIAADGVVTAEGAREVRLEVGRDVAVRVVEHAFDAAATPRGAHD LDVDPAVLARLRGAHGTGATGEVVVIDQPAVKLTAVDPRGVLAHLGLRQGDLLWRFDGQPVGPADLDRIATAVATPGSGV HALDVTRNGAAFTVSYYPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26481; Mature: 26350
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARTLHPLRLAVALAALTASPSASPAASGDRAAASARARAAAALAAPVSPAEVAALAAP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEECC EPASTPADYRARKVTLHVLGVQQPGTPGAFATVADVATWETRDVRVGDAIGRNLVVRAIA CCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECHHHCCCEEEEEEE ADGVVTAEGAREVRLEVGRDVAVRVVEHAFDAAATPRGAHDLDVDPAVLARLRGAHGTGA CCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC TGEVVVIDQPAVKLTAVDPRGVLAHLGLRQGDLLWRFDGQPVGPADLDRIATAVATPGSG CCEEEEEECCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC VHALDVTRNGAAFTVSYYPR EEEEEEECCCCEEEEEECCC >Mature Secondary Structure TARTLHPLRLAVALAALTASPSASPAASGDRAAASARARAAAALAAPVSPAEVAALAAP CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEECC EPASTPADYRARKVTLHVLGVQQPGTPGAFATVADVATWETRDVRVGDAIGRNLVVRAIA CCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECHHHCCCEEEEEEE ADGVVTAEGAREVRLEVGRDVAVRVVEHAFDAAATPRGAHDLDVDPAVLARLRGAHGTGA CCCEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC TGEVVVIDQPAVKLTAVDPRGVLAHLGLRQGDLLWRFDGQPVGPADLDRIATAVATPGSG CCEEEEEECCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC VHALDVTRNGAAFTVSYYPR EEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA