| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917164
Identifier: 220917164
GI number: 220917164
Start: 2302134
End: 2303006
Strand: Direct
Name: 220917164
Synonym: A2cp1_2061
Alternate gene names: NA
Gene position: 2302134-2303006 (Clockwise)
Preceding gene: 220917163
Following gene: 220917165
Centisome position: 45.77
GC content: 78.01
Gene sequence:
>873_bases GTGCTGAAGCGGCTCGCAGATCAGACCCTGTACGAGATCCTGGAGGTCCCACCCGACGCGTCGTCGCGCGACATCGCCGA GGCGGTGGAGCGCGCCCGCGCGCTCTACGGCCCCGGCTCGATCGCGACCTACACGCTCATGTCGAGCGAGGAGGCGTCGC TGCTCACGCGGCGGATCGAGGAGGCGCAGTCCACGCTCCTCGACCCGGACGCGCGGCGGCGCTACGACGACCTGCTCGGC GACCGGTCCGGCGCCGCGAACGCGGAGACGTCCGAGGCCGACGCCGGCGACCGCTGGCCCGCGCGCGTGCTCCCGCTCGT GCCGCAGCCGGATCGCGACGAGGCGCTGCGCGAGGCGGAGGCGAGCGCCGAGGAGTCCTGGCCGCTGCGCCCGGGCCACG TCGCCGGCGCGTCCGCGCCCACCCCGCCGCCGCCCGCGGACGGGCCCCCGCCGGTCCACCCGCGGCCGCCGCCCATCCCG CTCCGCCGCGAGGTCAGCGGCCCGGCCATGACGCCGGTGCCGCTGCCCTCCGTCGCGCAGGCGGGCCCCGAGCCCATCCC CCTGGTGAGCCCGGCCGCGCCGGGCGGCGCGCCGGCGCCGGAGGCCACCGCCTGGACGGGCGAGGTGCTGCGGCGCCTCC GCGAGGCCCGCGGGATCACGCTCCAGCAGCTCTCCGAGCGCATCAAGGTCACCCGCCACCACATCGAGAACATCGAGGGC GACCGCTTCGCGCTCTTGCCGGCGCCCGTCTACCTGCGCGGCATCCTCCTCAGCATGGCGCGCGAGCTGCGCCTCGACGG CCAGAAGGTGGCGCGCTCCTACCTCGAGCGCGTCACGGCGGCGACCGCCCCGGGCGCGCCGCGGCCGCGCTGA
Upstream 100 bases:
>100_bases CTGCTCGTCGAGCGGCCCGACGTCCGGGCCGCCAAGGCCTTCGCCGGGATCGCCGACGCGCTGCTGGCGCTCGACATCGC GGCGCGGCACGAGGCATGAG
Downstream 100 bases:
>100_bases GCGTCCCTGCACGCCTCGCGCCCCGAGCGTCCCCCGACCTCGCGCAACGTCCTCGGGCCGCGCTCGCGCTCGGGATGAGC GGCCAGGGTCCCGAGGCGCG
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAj Domain Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLKRLADQTLYEILEVPPDASSRDIAEAVERARALYGPGSIATYTLMSSEEASLLTRRIEEAQSTLLDPDARRRYDDLLG DRSGAANAETSEADAGDRWPARVLPLVPQPDRDEALREAEASAEESWPLRPGHVAGASAPTPPPPADGPPPVHPRPPPIP LRREVSGPAMTPVPLPSVAQAGPEPIPLVSPAAPGGAPAPEATAWTGEVLRRLREARGITLQQLSERIKVTRHHIENIEG DRFALLPAPVYLRGILLSMARELRLDGQKVARSYLERVTAATAPGAPRPR
Sequences:
>Translated_290_residues MLKRLADQTLYEILEVPPDASSRDIAEAVERARALYGPGSIATYTLMSSEEASLLTRRIEEAQSTLLDPDARRRYDDLLG DRSGAANAETSEADAGDRWPARVLPLVPQPDRDEALREAEASAEESWPLRPGHVAGASAPTPPPPADGPPPVHPRPPPIP LRREVSGPAMTPVPLPSVAQAGPEPIPLVSPAAPGGAPAPEATAWTGEVLRRLREARGITLQQLSERIKVTRHHIENIEG DRFALLPAPVYLRGILLSMARELRLDGQKVARSYLERVTAATAPGAPRPR >Mature_290_residues MLKRLADQTLYEILEVPPDASSRDIAEAVERARALYGPGSIATYTLMSSEEASLLTRRIEEAQSTLLDPDARRRYDDLLG DRSGAANAETSEADAGDRWPARVLPLVPQPDRDEALREAEASAEESWPLRPGHVAGASAPTPPPPADGPPPVHPRPPPIP LRREVSGPAMTPVPLPSVAQAGPEPIPLVSPAAPGGAPAPEATAWTGEVLRRLREARGITLQQLSERIKVTRHHIENIEG DRFALLPAPVYLRGILLSMARELRLDGQKVARSYLERVTAATAPGAPRPR
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31261; Mature: 31261
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00716 SIGMA70_2 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLADQTLYEILEVPPDASSRDIAEAVERARALYGPGSIATYTLMSSEEASLLTRRIE CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH EAQSTLLDPDARRRYDDLLGDRSGAANAETSEADAGDRWPARVLPLVPQPDRDEALREAE HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHH ASAEESWPLRPGHVAGASAPTPPPPADGPPPVHPRPPPIPLRREVSGPAMTPVPLPSVAQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AGPEPIPLVSPAAPGGAPAPEATAWTGEVLRRLREARGITLQQLSERIKVTRHHIENIEG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC DRFALLPAPVYLRGILLSMARELRLDGQKVARSYLERVTAATAPGAPRPR CEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLKRLADQTLYEILEVPPDASSRDIAEAVERARALYGPGSIATYTLMSSEEASLLTRRIE CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH EAQSTLLDPDARRRYDDLLGDRSGAANAETSEADAGDRWPARVLPLVPQPDRDEALREAE HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHH ASAEESWPLRPGHVAGASAPTPPPPADGPPPVHPRPPPIPLRREVSGPAMTPVPLPSVAQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AGPEPIPLVSPAAPGGAPAPEATAWTGEVLRRLREARGITLQQLSERIKVTRHHIENIEG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC DRFALLPAPVYLRGILLSMARELRLDGQKVARSYLERVTAATAPGAPRPR CEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA