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The map label for this gene is secY [H]

Identifier: 220917141

GI number: 220917141

Start: 2281401

End: 2282744

Strand: Direct

Name: secY [H]

Synonym: A2cp1_2038

Alternate gene names: 220917141

Gene position: 2281401-2282744 (Clockwise)

Preceding gene: 220917140

Following gene: 220917142

Centisome position: 45.36

GC content: 67.71

Gene sequence:

>1344_bases
ATGGCGGCAGCGAGCGGGCTGTTCAACATCTTCCGGATCGCCGAGCTCCGGAAGCGGCTGGTCTTCACCCTCGGGATGCT
GGCCGTCTACCGGCTCGGCATCTTCGTCACCACCCCCGGCGTGGACCGGCGGGCGATGCAGGACGTGGTCGCCCAGCAGG
GCAGCCTGCTCGGCCTGCTCAACTTCTTCTCCGGCGGCGCCTTCGAGCAGCTCTCGATCTTCGCGCTCGGCATCATGCCG
TACGTGTCGGCGTCCATCATCCTGCAGCTCCTGACGGTGGTGGTCCCGTCGCTCGAGAAGATGCAGAAGGAAGGCGAGCT
GGGGCGGCGCAAGATCACGCAGTACACGCGCTACGGCACGGTGATCCTCTCCGCGATCCAGGGCTACGGCATCGCCACCT
ACCTCGAGTCGCTGCGCGCCGGGAACGGCGTGGCGGTGGTGGGTGATCCGGGCTGGGGCTTCCGCCTGCTCACCATGGTG
TCGCTCGCCGCCGGCACCGCGTTCATCATGTGGATGGGCGAGCAGATCACCGAGCGCGGCGTCGGCAACGGCATCTCGCT
CATCATCTTCGCGGGCATCGTGGCCCGCGTCCCGGCCGCCATCTACACCACGGTCCGGCAGCTCGGCGCCTCCGGCTCGC
AGCTCAGCGGCCTGGGCCTGCTCGTGCTCACCGCGCTGATGGTGGTGGTGATCGGGGCGATCGTCTACGTGGAGCGCGGC
CAGCGCCGCATCCCGATCCAGTACGCGAAGCGCATGGTGGGCCGGAAGCTCTACGGCGGCCAGTCCACGCACCTGCCGCT
GAAGGTGAACACCTCCGGCGTCATCCCGCCCATCTTCGCGTCGTCGCTGCTGCTGCTGCCGGCCACCATGGCGGGCTGGT
TCCCGTTCCTGCAGCGGATGTCGAACGCCATCCAGGCGGGGAGCTGGATCTACAACACCATCTACGTCGCGCTGATCATC
TTCTTCGCGTACTTCTACACCGCGGTGACGTTCAACCCGGTCGACGTGGCCGACAACCTCAAGAAGTACGGCGGCTACAT
CCCCGGCATCCGCCCGGGCAAGAAGACCGCCGACTACATCGACTTCGTGCTGTCCCGCATCACCTTCGGCGGCGCCATCT
ACCTGGCCGCCATCTGCGTGCTGCCGACGATCATCACGAACGAGTTCGGGGTGAACTTCTACTTCGGCGGCACCTCGCTG
CTCATCGTGGTGGGCGTGGCGCTCGACACCGTGCAGCAGATCGAGGGGCACCTCATCACCCGGCACTACGAAGGCTTCAC
CGGCCCGCGGGGCCCGCGCATCCGCGGGCGGCGCATGACGACGGGGCAGGCGGTCGGCGCGTGA

Upstream 100 bases:

>100_bases
GCGAAGTAGGGGTCCCGGCGCGCCCGCCGTCCACGGCGGGCCGCCCGGACGGTGGGCGGGCGGTCGGCCGTCCGGCAGGG
CGAAGGGGAAAGGGAACCGC

Downstream 100 bases:

>100_bases
CACGCCGCAGGGGCCTCGCCGCGGCGGGGCCCCTCGCGCATCCGGAGGCGACGCGATGATCCTCATCCTCCTCGGCCCGC
CCGGCGCGGGCAAGGGCACG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MAAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLLNFFSGGAFEQLSIFALGIMP
YVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGTVILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMV
SLAAGTAFIMWMGEQITERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYVERG
QRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGWFPFLQRMSNAIQAGSWIYNTIYVALII
FFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFYFGGTSL
LIVVGVALDTVQQIEGHLITRHYEGFTGPRGPRIRGRRMTTGQAVGA

Sequences:

>Translated_447_residues
MAAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLLNFFSGGAFEQLSIFALGIMP
YVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGTVILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMV
SLAAGTAFIMWMGEQITERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYVERG
QRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGWFPFLQRMSNAIQAGSWIYNTIYVALII
FFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFYFGGTSL
LIVVGVALDTVQQIEGHLITRHYEGFTGPRGPRIRGRRMTTGQAVGA
>Mature_446_residues
AAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLLNFFSGGAFEQLSIFALGIMPY
VSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGTVILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMVS
LAAGTAFIMWMGEQITERGVGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYVERGQ
RRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGWFPFLQRMSNAIQAGSWIYNTIYVALIIF
FAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTADYIDFVLSRITFGGAIYLAAICVLPTIITNEFGVNFYFGGTSLL
IVVGVALDTVQQIEGHLITRHYEGFTGPRGPRIRGRRMTTGQAVGA

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=419, Percent_Identity=52.0286396181384, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48354; Mature: 48223

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAASGLFNIFRIAELRKRLVFTLGMLAVYRLGIFVTTPGVDRRAMQDVVAQQGSLLGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCHHHHH
NFFSGGAFEQLSIFALGIMPYVSASIILQLLTVVVPSLEKMQKEGELGRRKITQYTRYGT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILSAIQGYGIATYLESLRAGNGVAVVGDPGWGFRLLTMVSLAAGTAFIMWMGEQITERG
HHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGNGISLIIFAGIVARVPAAIYTTVRQLGASGSQLSGLGLLVLTALMVVVIGAIVYVERG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
QRRIPIQYAKRMVGRKLYGGQSTHLPLKVNTSGVIPPIFASSLLLLPATMAGWFPFLQRM
CCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SNAIQAGSWIYNTIYVALIIFFAYFYTAVTFNPVDVADNLKKYGGYIPGIRPGKKTADYI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
DFVLSRITFGGAIYLAAICVLPTIITNEFGVNFYFGGTSLLIVVGVALDTVQQIEGHLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCHHEE
RHYEGFTGPRGPRIRGRRMTTGQAVGA
EECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]