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The map label for this gene is rpmD

Identifier: 220917139

GI number: 220917139

Start: 2280547

End: 2280777

Strand: Direct

Name: rpmD

Synonym: A2cp1_2036

Alternate gene names: 220917139

Gene position: 2280547-2280777 (Clockwise)

Preceding gene: 220917138

Following gene: 220917140

Centisome position: 45.34

GC content: 70.13

Gene sequence:

>231_bases
ATGGCTGCCATCAAGGTCAAGCTCGTCCGCGGGCTCGCGGGCTGCCCCTGGCCGCACCGGGTCATCGTCGAGGGCCTGGG
TCTCAAGAAGCGTGAGTCGACGAAGCTCCTCCCCGACACGCCCCAGACGCTGGGGATGATCGCGAAGGTCTCCTACCTCG
TGGAGTGGGAGCGGGTGGACGCTGCGCCGCCGCCTGGCCGGAAGGCCAGGAAGGCCGCGGCCCGTTCGTGA

Upstream 100 bases:

>100_bases
GACCGTCGCCGGCCTGAAGCGGCTGCGTTCGATCGAGGACAGCGCCCGGCTCCGCGGCAAGCAGGCCGCCGAGATCACCG
GGGCGTAGGAAGGAACCACC

Downstream 100 bases:

>100_bases
CAGTCACGCGCCGCGTGCTAAAAGGAGAACCTTCATGTCGCTGAACCAGCTCAAGGCGCCCCGGGGCGCCAACCGCGCCA
AGAAGCGCGTCGGCCGTGGC

Product: 50S ribosomal protein L30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MAAIKVKLVRGLAGCPWPHRVIVEGLGLKKRESTKLLPDTPQTLGMIAKVSYLVEWERVDAAPPPGRKARKAAARS

Sequences:

>Translated_76_residues
MAAIKVKLVRGLAGCPWPHRVIVEGLGLKKRESTKLLPDTPQTLGMIAKVSYLVEWERVDAAPPPGRKARKAAARS
>Mature_75_residues
AAIKVKLVRGLAGCPWPHRVIVEGLGLKKRESTKLLPDTPQTLGMIAKVSYLVEWERVDAAPPPGRKARKAAARS

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_ANAD2 (B8J878)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002492443.1
- ProteinModelPortal:   B8J878
- SMR:   B8J878
- GeneID:   7300163
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_2036
- HOGENOM:   HBG690556
- ProtClustDB:   PRK05611
- GO:   GO:0006412
- HAMAP:   MF_01371_B
- InterPro:   IPR005996
- InterPro:   IPR016082
- Gene3D:   G3DSA:3.30.1390.20
- PIRSF:   PIRSF002211
- TIGRFAMs:   TIGR01308

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 8286; Mature: 8155

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIKVKLVRGLAGCPWPHRVIVEGLGLKKRESTKLLPDTPQTLGMIAKVSYLVEWERVD
CCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
AAPPPGRKARKAAARS
CCCCCCHHHHHHCCCC
>Mature Secondary Structure 
AAIKVKLVRGLAGCPWPHRVIVEGLGLKKRESTKLLPDTPQTLGMIAKVSYLVEWERVD
CCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
AAPPPGRKARKAAARS
CCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA