| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is pheT [H]
Identifier: 220917095
GI number: 220917095
Start: 2247836
End: 2250238
Strand: Direct
Name: pheT [H]
Synonym: A2cp1_1992
Alternate gene names: 220917095
Gene position: 2247836-2250238 (Clockwise)
Preceding gene: 220917094
Following gene: 220917096
Centisome position: 44.69
GC content: 76.49
Gene sequence:
>2403_bases GTGCGCATCTCGCTCAAGTGGCTATCGGAGTACGTGGACCTGCCCGCGCCCGAGGAGCTGGCGCGGCGCCTCACCGCCGT GGGCTTCGAGATCGAGGCGGTGGAGCGCACCGGCGCGGGGCTGAAGGGCGTGGTGGCGGCGCGCATCGCCGCCTCCGAGC CGCACCCCAACGCCGAGAAGCTCTCGGTGACCCGGGTCGACGCGGGCGGCGGCGAGCCGCTGCAGGTGGTGTGCGGCGCG AAGAACTACCAGGTGGGCGACGTGGTCCCGCTCGCCACGGTGGGCGCCGAGCTGCCCGGCGGCACGAAGATCTCCAAGGC GAAGCTGCGCGGGGTGGAGTCCTTCGGGATGCTCTGCTCGGCGCGCGAGCTCGGGCTCTCCGCCGACGCGACCGGCCTGC TCATCCTCCCGCCCGGCACGGTCCCGGGCACGCCCATCGGCGAGGCGCTCGGCCTCGACGACGTGCTGTTCGAGGTGAAC GTCACCCCGAACCGGCCGGACGCGCTCTCGCACGTGGGCATCGCCCGCGAGGTGGCGGCGCTGCTGGGCCAGAAGGTCCG GCTGCCGAGGCCGGGGCTGGTGGAGGGCGGCGGCGCCGCGGCCGACGCGGTGAAGGTCCGGATCGAGGCGCCGGAGAAGT GCGCCCGCTACGCCGCGCGCGTGGTGGAGGGCGTGAAGATCGGCCCGTCCCCGACCTGGCTCGCGCAGCGGCTGGAGCGC TGCGGCATCCGCTCCATCTCCAACGTGGTGGACGCGACGAACTACGTGCTGCTCGAGCTCGGGCACCCGCTGCACGCGTT CGACCTCGACGAGGTGGCCGGCCACGAGATCGTGGTCCGCACCGCGCGGCCGGGCGAGCGGATCACCACGCTCGACGGGA AGGACCGGGCGCTCGAGCCGGACGACCTGCTCATCGCCGATCGCGACCGCGGCAGCGCGCTCGCGGGCGTGATGGGCGGC GGCGACTCGGAGATCTCCGGCGGCACCACCCGCGTGCTGCTGGAGTCGGCCTGGTTCGCGCCGAGCGGCGTGCGCCGGAC CTCGCGCCGTCACGGCCTGAAGAGCGAGGCGTCCTACCGCTTCGAGCGCGGCGCCGACCCGGGGATGGTGATCCCGGCGC TGGATCGCTGCGCGGCGCTCATCGCCGGGCTGTCCGGCGGGACGGTGCGCGCCGGGGTGGTGGACGCGAAGGCGCGCGAG GTCGCCTCGCCCGAGGTGCGCATGCGCTGGGATCGCCCGGCGCAGGTGCTGGGCATGCCGGTGAGCCGCGAGGACGCCCG CCGCATCCTGCTCTCGCTGGGCTTCGAGGAGCGCGCCAGCGACGGCGACGCGGTGAGCTTCGGCGTGCCGAGCTGGCGCG TGGACGTCTCGATCGAGGAGGACCTGGTCGAGGAGATCGTCCGGACGCTGGGCTACGACGCCATCCCCGAGACGCTCCCC GGCCCCGCCGTGCGCACGCCGGCCGAGTCCGCCGAGGCGCAGGGGGTGGGCCGCGCCCGCGCCGCGCTGGAGGCGGCCGG GTTCAGCGAGGCGGTGAACTTCAGCTTCGTGGCGGCGCGCGACCTCGAGCCGCTCGCCGGCGGGCTCGCCGCCGGCGGCA TCGCGCTCCGGAACCCCATCAGCGCCGACCTGGCGGTGATGCGCACCAGCCTGGTGCCGTCGCTGCTCCGCAACGCCGCG CACAACCGGCGGCAGCGGGTCGAGGACGTGCGCCTGTACGAGATCGCCCGCGCCTACGGCCCGCGCGCGGCCGGGGCCGC CGGGGACTCGCCCGGCCACGAGGCCACCGAGGTCGCCGGCGTCCTGCTGGGGCGGCGCAGCCCGGTGGGCTGGGCGGTGG GCGGCGACGTCGCCGACTTCCACGACGCCAAGGCGGCGGTGCAGGGGCTGCTGGAGGCGCTCGGGGTGGAGGCGTCCTGG TCCGCACCGGGGCCCGGCTGGCTGCACCCGCGCACCTCGGCGGCGCTCCGCGCGCCGGGCGGCGCGGCGCTGGGCGAGCT CGGCGAGCTGCACCCCCGGGTCGCCGAGGCGTTCGAGCTCCCGCGCGGCGTGCTCGCGTTCCGGCTCTCGCTGGACGCGC TGCTCGCGGCCGCGCGGCTGGTGCCGCAGTACCGGCCCATCCCGAGGCTCCCGGCGGTGCTCCGCGACGTGGCGGTGGTG GTGGAGGATGCGGTGACCGCCGCCGCCGTGGAGGTGCTGGTGCGCGAGGAGCCGCTCGTCGAGGCGGTGATCCTGTTCGA CGTGTACAAGGGCGCGCCGCTGCCGGCGGGGCGCAAGAACCTCGCGCTCGCCATCACCTACCGCGCGCCGGACCGCACGC TCACCGACGCCGAGGCGGACGCCGCGCACGCGCGCATCGTGGCGCGGCTGCGCGAGCGCGTCGGGGCGGAGCTCCGGGGA TAG
Upstream 100 bases:
>100_bases ATGGGGGTCGAGCGCATGGCGATGCTCCGCTACGGCATCGACGACCTGCGCCTGTACTTCGAGAACGACCTCCGCTTCCT CGAACAGTTCTGAGAACGCC
Downstream 100 bases:
>100_bases CGTGACGCCCGCGGGCCGGCGCGCCTGGGCAGCGGCGGCGTTCGCGCTCGCGGCGGCGTTCGCGTCGTGGAACCCGCTCG CCGCGCCGTTCGGGCTGGTG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 800; Mature: 800
Protein sequence:
>800_residues MRISLKWLSEYVDLPAPEELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAEKLSVTRVDAGGGEPLQVVCGA KNYQVGDVVPLATVGAELPGGTKISKAKLRGVESFGMLCSARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVN VTPNRPDALSHVGIAREVAALLGQKVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLAQRLER CGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKDRALEPDDLLIADRDRGSALAGVMGG GDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKSEASYRFERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKARE VASPEVRMRWDRPAQVLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAIPETLP GPAVRTPAESAEAQGVGRARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGGIALRNPISADLAVMRTSLVPSLLRNAA HNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGHEATEVAGVLLGRRSPVGWAVGGDVADFHDAKAAVQGLLEALGVEASW SAPGPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQYRPIPRLPAVLRDVAVV VEDAVTAAAVEVLVREEPLVEAVILFDVYKGAPLPAGRKNLALAITYRAPDRTLTDAEADAAHARIVARLRERVGAELRG
Sequences:
>Translated_800_residues MRISLKWLSEYVDLPAPEELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAEKLSVTRVDAGGGEPLQVVCGA KNYQVGDVVPLATVGAELPGGTKISKAKLRGVESFGMLCSARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVN VTPNRPDALSHVGIAREVAALLGQKVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLAQRLER CGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKDRALEPDDLLIADRDRGSALAGVMGG GDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKSEASYRFERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKARE VASPEVRMRWDRPAQVLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAIPETLP GPAVRTPAESAEAQGVGRARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGGIALRNPISADLAVMRTSLVPSLLRNAA HNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGHEATEVAGVLLGRRSPVGWAVGGDVADFHDAKAAVQGLLEALGVEASW SAPGPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQYRPIPRLPAVLRDVAVV VEDAVTAAAVEVLVREEPLVEAVILFDVYKGAPLPAGRKNLALAITYRAPDRTLTDAEADAAHARIVARLRERVGAELRG >Mature_800_residues MRISLKWLSEYVDLPAPEELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAEKLSVTRVDAGGGEPLQVVCGA KNYQVGDVVPLATVGAELPGGTKISKAKLRGVESFGMLCSARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVN VTPNRPDALSHVGIAREVAALLGQKVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLAQRLER CGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKDRALEPDDLLIADRDRGSALAGVMGG GDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKSEASYRFERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKARE VASPEVRMRWDRPAQVLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAIPETLP GPAVRTPAESAEAQGVGRARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGGIALRNPISADLAVMRTSLVPSLLRNAA HNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGHEATEVAGVLLGRRSPVGWAVGGDVADFHDAKAAVQGLLEALGVEASW SAPGPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQYRPIPRLPAVLRDVAVV VEDAVTAAAVEVLVREEPLVEAVILFDVYKGAPLPAGRKNLALAITYRAPDRTLTDAEADAAHARIVARLRERVGAELRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=812, Percent_Identity=39.1625615763547, Blast_Score=490, Evalue=1e-139, Organism=Drosophila melanogaster, GI21355211, Length=398, Percent_Identity=22.8643216080402, Blast_Score=75, Evalue=3e-13,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 84056; Mature: 84056
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISLKWLSEYVDLPAPEELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAEK CEEEHHHHHHHHCCCCHHHHHHHHHHHCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHH LSVTRVDAGGGEPLQVVCGAKNYQVGDVVPLATVGAELPGGTKISKAKLRGVESFGMLCS EEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCHHHHHHHHH ARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVNVTPNRPDALSHVGIAREVAA HHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LLGQKVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLAQRLER HHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH CGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKDRALEP CCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCC DDLLIADRDRGSALAGVMGGGDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKSEASYR CCEEEEECCCCCEEEEEECCCCCCCCCCHHEEEEHHCCCCCCHHHHHHHHCCCCCHHHHH FERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKAREVASPEVRMRWDRPAQVLGMP HHCCCCCCEECHHHHHHHHHHHCCCCCCEEECEECHHHHHHCCCCCEEECCCCHHHHCCC VSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAIPETLP CCHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCC GPAVRTPAESAEAQGVGRARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGGIALRNPI CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHCCEEEEEECCCCHHHCHHHHCCHHHCCCC SADLAVMRTSLVPSLLRNAAHNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGHEATEVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH VLLGRRSPVGWAVGGDVADFHDAKAAVQGLLEALGVEASWSAPGPGWLHPRTSAALRAPG HHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC GAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQYRPIPRLPAVLRDVAVV CHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VEDAVTAAAVEVLVREEPLVEAVILFDVYKGAPLPAGRKNLALAITYRAPDRTLTDAEAD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHH AAHARIVARLRERVGAELRG HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRISLKWLSEYVDLPAPEELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAEK CEEEHHHHHHHHCCCCHHHHHHHHHHHCCEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHH LSVTRVDAGGGEPLQVVCGAKNYQVGDVVPLATVGAELPGGTKISKAKLRGVESFGMLCS EEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCHHHHHHHHH ARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVNVTPNRPDALSHVGIAREVAA HHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LLGQKVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLAQRLER HHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH CGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKDRALEP CCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCC DDLLIADRDRGSALAGVMGGGDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKSEASYR CCEEEEECCCCCEEEEEECCCCCCCCCCHHEEEEHHCCCCCCHHHHHHHHCCCCCHHHHH FERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKAREVASPEVRMRWDRPAQVLGMP HHCCCCCCEECHHHHHHHHHHHCCCCCCEEECEECHHHHHHCCCCCEEECCCCHHHHCCC VSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAIPETLP CCHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCC GPAVRTPAESAEAQGVGRARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGGIALRNPI CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHCCEEEEEECCCCHHHCHHHHCCHHHCCCC SADLAVMRTSLVPSLLRNAAHNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGHEATEVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH VLLGRRSPVGWAVGGDVADFHDAKAAVQGLLEALGVEASWSAPGPGWLHPRTSAALRAPG HHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC GAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQYRPIPRLPAVLRDVAVV CHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VEDAVTAAAVEVLVREEPLVEAVILFDVYKGAPLPAGRKNLALAITYRAPDRTLTDAEAD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHH AAHARIVARLRERVGAELRG HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA