| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916995
Identifier: 220916995
GI number: 220916995
Start: 2123264
End: 2123878
Strand: Reverse
Name: 220916995
Synonym: A2cp1_1891
Alternate gene names: NA
Gene position: 2123878-2123264 (Counterclockwise)
Preceding gene: 220916996
Following gene: 220916994
Centisome position: 42.23
GC content: 70.57
Gene sequence:
>615_bases ATGCCCCGCGCCAGCTCCCGCGCCCTGCCCCGCACGCTCCCGCTGCTCACCGCCGCCGCGCTCGTCGCCGCCTGCGGCCC GCGAGCCTTCACCCGCGGTGCCTACGAGGACCCGAACACCATCGAGCTGCTCTCCGACCAGTTCAACGAGAACGACCTGC AGCTCATCGCCAAGAAGATGACCGGCTCGCTGCTCGGCGCGCCCGTGGTGCAGGCGCTGCCGGGCCGGCCGGTGCTGGTG GTGGGCCGCGTCCGGAACAAGACCTCCGAGCACATCGACACCGAGTCGCTCGCGGACAAGGTCCGGGTCGAGCTGCAGCG GTCCGGCCGGTTCGCGTTCGCCGACGCGGCGGCCCGCGAGCAGATCGCCGCCGAGTACGACTACCAGCAGTCCGGCATGG TCGCGAAGGAGACCGCCAAGGGCCCGGGCGCGCAGGTCGGCGCCGACTGCGTCCTGACCGGGCAGATCGCGTCGATCGTG CAGGAGGTCGGCGCGGACAAGGTCGTCTACTACAAGATGACCATGCAGCTCACCGACCTCCGGACCGGCCTCATCACCTG GACCGACGAGAAGGAGCTGCGGAAGAAGTTCCGGAAGCAGTCGGTGGGCTGGTAG
Upstream 100 bases:
>100_bases CCTCCACTACGCGCTCGACATCCCGGTGGAGCAGGACACCACCGTCACCCACCGCATCTTCCTCGGCCTCGGCCTGCGCC TGTAGGCCCCGGAGACCGCC
Downstream 100 bases:
>100_bases GGGGGCGGGCCGTGCGCCGCGCCCGCGCGGCCGCGATGGCGCTCGGGGCCGTGCTGCTCTCCGGCTGCGCCGGCGACTAC GTCTCGCGCACGCGCGCGAT
Product: membrane lipoprotein lipid attachment site
Products: NA
Alternate protein names: Membrane Lipoprotein Lipid Attachment Site
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPRASSRALPRTLPLLTAAALVAACGPRAFTRGAYEDPNTIELLSDQFNENDLQLIAKKMTGSLLGAPVVQALPGRPVLV VGRVRNKTSEHIDTESLADKVRVELQRSGRFAFADAAAREQIAAEYDYQQSGMVAKETAKGPGAQVGADCVLTGQIASIV QEVGADKVVYYKMTMQLTDLRTGLITWTDEKELRKKFRKQSVGW
Sequences:
>Translated_204_residues MPRASSRALPRTLPLLTAAALVAACGPRAFTRGAYEDPNTIELLSDQFNENDLQLIAKKMTGSLLGAPVVQALPGRPVLV VGRVRNKTSEHIDTESLADKVRVELQRSGRFAFADAAAREQIAAEYDYQQSGMVAKETAKGPGAQVGADCVLTGQIASIV QEVGADKVVYYKMTMQLTDLRTGLITWTDEKELRKKFRKQSVGW >Mature_203_residues PRASSRALPRTLPLLTAAALVAACGPRAFTRGAYEDPNTIELLSDQFNENDLQLIAKKMTGSLLGAPVVQALPGRPVLVV GRVRNKTSEHIDTESLADKVRVELQRSGRFAFADAAAREQIAAEYDYQQSGMVAKETAKGPGAQVGADCVLTGQIASIVQ EVGADKVVYYKMTMQLTDLRTGLITWTDEKELRKKFRKQSVGW
Specific function: Unknown
COG id: COG3417
COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22237; Mature: 22106
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRASSRALPRTLPLLTAAALVAACGPRAFTRGAYEDPNTIELLSDQFNENDLQLIAKKM CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH TGSLLGAPVVQALPGRPVLVVGRVRNKTSEHIDTESLADKVRVELQRSGRFAFADAAARE HHHHHCCHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEHHHHHHH QIAAEYDYQQSGMVAKETAKGPGAQVGADCVLTGQIASIVQEVGADKVVYYKMTMQLTDL HHHHHCCCCCCCCEEHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEEEHHHHH RTGLITWTDEKELRKKFRKQSVGW HCCEEEECCHHHHHHHHHHHCCCC >Mature Secondary Structure PRASSRALPRTLPLLTAAALVAACGPRAFTRGAYEDPNTIELLSDQFNENDLQLIAKKM CCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH TGSLLGAPVVQALPGRPVLVVGRVRNKTSEHIDTESLADKVRVELQRSGRFAFADAAARE HHHHHCCHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEHHHHHHH QIAAEYDYQQSGMVAKETAKGPGAQVGADCVLTGQIASIVQEVGADKVVYYKMTMQLTDL HHHHHCCCCCCCCEEHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEEEHHHHH RTGLITWTDEKELRKKFRKQSVGW HCCEEEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA