| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is fbp [H]
Identifier: 220916986
GI number: 220916986
Start: 2113228
End: 2113551
Strand: Reverse
Name: fbp [H]
Synonym: A2cp1_1882
Alternate gene names: 220916986
Gene position: 2113551-2113228 (Counterclockwise)
Preceding gene: 220916987
Following gene: 220916985
Centisome position: 42.02
GC content: 71.6
Gene sequence:
>324_bases ATGGCCAAGCCGAAGATCGAGGAGCTGGTGAAGGGGAAGGGCCCGGAGGCGGTCCGGGGCAAGACGGTCGAGGTCCACTA CACGGGCTGGCTCCTCGACGGGAAGCAGTTCGACTCGTCGGTGGGCGGCAGCCCGTTCTCCTTCCGGCTCGGCGCCGGCG AGGTGATCGAGGGCTGGGACCGCGGCGTCGCCGGGATGAAGGTCGGCGGGAAGCGGAAGCTGACGCTGCCGCCGGAGCTG GCCTACGGGGCGCGCGGCGCGCCCCCGGAGATCCCGCCCGGCGCCACGCTGGTGTTCGAGGTGGAGCTGCTCTCGGTTTA CTGA
Upstream 100 bases:
>100_bases GCTGACTCGCGACGGCTGCCCGCCGCCCGGCGTCCCCGCGTGGCGCGCCGGGCCGCGCGCGGCTACCCTACGCGCCACAC CCGTCGAGGAGCGCACGCGC
Downstream 100 bases:
>100_bases CGGTCCGCGTCCGGCCGCCGCCCTCCTGCGCTGGCCCCCGAGAGGAGGCCGCGGCGGCCGTCGCAACCCGCCCGGCCCGC CGTTAGGTGCTCCCCGTCCG
Product: FKBP-type peptidylprolyl isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MAKPKIEELVKGKGPEAVRGKTVEVHYTGWLLDGKQFDSSVGGSPFSFRLGAGEVIEGWDRGVAGMKVGGKRKLTLPPEL AYGARGAPPEIPPGATLVFEVELLSVY
Sequences:
>Translated_107_residues MAKPKIEELVKGKGPEAVRGKTVEVHYTGWLLDGKQFDSSVGGSPFSFRLGAGEVIEGWDRGVAGMKVGGKRKLTLPPEL AYGARGAPPEIPPGATLVFEVELLSVY >Mature_106_residues AKPKIEELVKGKGPEAVRGKTVEVHYTGWLLDGKQFDSSVGGSPFSFRLGAGEVIEGWDRGVAGMKVGGKRKLTLPPELA YGARGAPPEIPPGATLVFEVELLSVY
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI206725530, Length=89, Percent_Identity=60.6741573033708, Blast_Score=109, Evalue=5e-25, Organism=Homo sapiens, GI17149844, Length=89, Percent_Identity=60.6741573033708, Blast_Score=109, Evalue=5e-25, Organism=Homo sapiens, GI17149842, Length=89, Percent_Identity=60.6741573033708, Blast_Score=109, Evalue=5e-25, Organism=Homo sapiens, GI4503729, Length=86, Percent_Identity=61.6279069767442, Blast_Score=108, Evalue=6e-25, Organism=Homo sapiens, GI17149836, Length=89, Percent_Identity=60.6741573033708, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI4503725, Length=89, Percent_Identity=60.6741573033708, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI4758380, Length=89, Percent_Identity=53.9325842696629, Blast_Score=99, Evalue=7e-22, Organism=Homo sapiens, GI224809329, Length=87, Percent_Identity=54.0229885057471, Blast_Score=89, Evalue=6e-19, Organism=Homo sapiens, GI224809327, Length=87, Percent_Identity=54.0229885057471, Blast_Score=89, Evalue=6e-19, Organism=Homo sapiens, GI4758384, Length=87, Percent_Identity=54.0229885057471, Blast_Score=89, Evalue=6e-19, Organism=Homo sapiens, GI224809331, Length=87, Percent_Identity=54.0229885057471, Blast_Score=87, Evalue=2e-18, Organism=Homo sapiens, GI7706131, Length=105, Percent_Identity=39.0476190476191, Blast_Score=82, Evalue=8e-17, Organism=Homo sapiens, GI4503727, Length=97, Percent_Identity=43.298969072165, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI192448443, Length=93, Percent_Identity=45.1612903225806, Blast_Score=77, Evalue=2e-15, Organism=Homo sapiens, GI8923659, Length=91, Percent_Identity=46.1538461538462, Blast_Score=75, Evalue=8e-15, Organism=Homo sapiens, GI33469985, Length=109, Percent_Identity=39.4495412844037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI219842220, Length=91, Percent_Identity=40.6593406593407, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI206725547, Length=92, Percent_Identity=44.5652173913043, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI150010552, Length=106, Percent_Identity=40.5660377358491, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI31317231, Length=93, Percent_Identity=45.1612903225806, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082390, Length=97, Percent_Identity=52.5773195876289, Blast_Score=87, Evalue=3e-19, Organism=Escherichia coli, GI1789745, Length=96, Percent_Identity=55.2083333333333, Blast_Score=81, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71993519, Length=89, Percent_Identity=59.5505617977528, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17540882, Length=112, Percent_Identity=47.3214285714286, Blast_Score=102, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17561782, Length=100, Percent_Identity=51, Blast_Score=92, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17561778, Length=99, Percent_Identity=44.4444444444444, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561780, Length=100, Percent_Identity=40, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71993555, Length=86, Percent_Identity=44.1860465116279, Blast_Score=68, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320727, Length=93, Percent_Identity=61.2903225806452, Blast_Score=104, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323482, Length=101, Percent_Identity=51.4851485148515, Blast_Score=100, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6323566, Length=101, Percent_Identity=50.4950495049505, Blast_Score=99, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324194, Length=104, Percent_Identity=50.9615384615385, Blast_Score=97, Evalue=5e-22, Organism=Drosophila melanogaster, GI24647110, Length=104, Percent_Identity=63.4615384615385, Blast_Score=126, Evalue=2e-30, Organism=Drosophila melanogaster, GI281363946, Length=90, Percent_Identity=56.6666666666667, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI17352457, Length=90, Percent_Identity=56.6666666666667, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583150, Length=100, Percent_Identity=54, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI24655568, Length=89, Percent_Identity=56.1797752808989, Blast_Score=99, Evalue=5e-22, Organism=Drosophila melanogaster, GI21356629, Length=111, Percent_Identity=45.945945945946, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 11381; Mature: 11250
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPKIEELVKGKGPEAVRGKTVEVHYTGWLLDGKQFDSSVGGSPFSFRLGAGEVIEGWD CCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCEECCCC RGVAGMKVGGKRKLTLPPELAYGARGAPPEIPPGATLVFEVELLSVY CCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure AKPKIEELVKGKGPEAVRGKTVEVHYTGWLLDGKQFDSSVGGSPFSFRLGAGEVIEGWD CCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCEECCCC RGVAGMKVGGKRKLTLPPELAYGARGAPPEIPPGATLVFEVELLSVY CCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]