| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is livF [H]
Identifier: 220916925
GI number: 220916925
Start: 2035672
End: 2036403
Strand: Reverse
Name: livF [H]
Synonym: A2cp1_1821
Alternate gene names: 220916925
Gene position: 2036403-2035672 (Counterclockwise)
Preceding gene: 220916926
Following gene: 220916924
Centisome position: 40.49
GC content: 73.63
Gene sequence:
>732_bases GTGACGGCGCCCTTCCCCGCCCCGGCGCCGGCCGGCGAGATGCTGCGCGTCTCCGGCCTGCACGCGTTCTACGGTGAGTC GCACGTGCTCCACGGCGTGGACCTCGCGGTCGCCGCCGGGGAGGTGGTCACGCTGCTCGGCCGGAACGGCTCGGGCCGCA CCACCACGCTGAAGGCCATCCTGGGGCTCACCGGCCGCCGCACCGGGTCGGTGGTGGTGAACGGGCGCGAGACCGTCCGC ATGCCCACGCACCGGATCGTGCACCTGGGCGTCGGCTACTGCCCGGAGGAGCGCGGGATCTTCTCGCGCCTCACCGCCGA GGAGAACCTCACGCTGCTCCCCGAGGTGCGCAGCGGCGGCATGCCGCTCGAGCGCATCTACGAGATGTTCCCGAACCTGT GGGAGCGCCGGAGGAGCCCCGGCTCACGCCTCTCCGGCGGCGAGCAGCAGATGCTGGCGCTCGCCCGGATCCTGCGCACC GGCGCGCGCCTGCTGCTGCTCGACGAGATCACCGAGGGGCTCGCCCCGGTGATCGTCCAGGCGCTGGGGCGGGCCGTCCG CGCCCTGAAGGACCACGGGTTCACGCTGGTGCTGGTGGAGCAGAACTTCCGCTTCGTCGCGCCGCTCGCCGATCGGCACC TGCTCGTCGAGCGCGGCCGGGTGGTCGGCGAGGTGGCGCGCGCCGAGCTGGAGTCACGGATGGAGTCGCTGCAGCGGTTC CTGGGCGTCTGA
Upstream 100 bases:
>100_bases GCGTCACGGTGCTGGCGCGCGGGAGCGTGCTCGCCGAGGGGACCTACGACGAGGTCTCGCGCGACCCCGCGGTGCTCGAG GCGTACATCGGGGCGTCCCC
Downstream 100 bases:
>100_bases CGCCCGCACACACGGATGGGAGGAAGCATGCACCGGTTCGCCCTCGCCCTCGTCACCGCCGGCCTCGCCGCCGGCGCGGC GCCCGCCCCCGCCGCGGAGA
Product: ABC transporter-like protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein F [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTAPFPAPAPAGEMLRVSGLHAFYGESHVLHGVDLAVAAGEVVTLLGRNGSGRTTTLKAILGLTGRRTGSVVVNGRETVR MPTHRIVHLGVGYCPEERGIFSRLTAEENLTLLPEVRSGGMPLERIYEMFPNLWERRRSPGSRLSGGEQQMLALARILRT GARLLLLDEITEGLAPVIVQALGRAVRALKDHGFTLVLVEQNFRFVAPLADRHLLVERGRVVGEVARAELESRMESLQRF LGV
Sequences:
>Translated_243_residues MTAPFPAPAPAGEMLRVSGLHAFYGESHVLHGVDLAVAAGEVVTLLGRNGSGRTTTLKAILGLTGRRTGSVVVNGRETVR MPTHRIVHLGVGYCPEERGIFSRLTAEENLTLLPEVRSGGMPLERIYEMFPNLWERRRSPGSRLSGGEQQMLALARILRT GARLLLLDEITEGLAPVIVQALGRAVRALKDHGFTLVLVEQNFRFVAPLADRHLLVERGRVVGEVARAELESRMESLQRF LGV >Mature_242_residues TAPFPAPAPAGEMLRVSGLHAFYGESHVLHGVDLAVAAGEVVTLLGRNGSGRTTTLKAILGLTGRRTGSVVVNGRETVRM PTHRIVHLGVGYCPEERGIFSRLTAEENLTLLPEVRSGGMPLERIYEMFPNLWERRRSPGSRLSGGEQQMLALARILRTG ARLLLLDEITEGLAPVIVQALGRAVRALKDHGFTLVLVEQNFRFVAPLADRHLLVERGRVVGEVARAELESRMESLQRFL GV
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0410
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=220, Percent_Identity=25.9090909090909, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI30795238, Length=220, Percent_Identity=25.9090909090909, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=193, Percent_Identity=30.5699481865285, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI153792144, Length=245, Percent_Identity=27.7551020408163, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI47078218, Length=198, Percent_Identity=29.7979797979798, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI45446740, Length=198, Percent_Identity=29.7979797979798, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27436953, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27477115, Length=219, Percent_Identity=28.310502283105, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=23.696682464455, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI105990541, Length=186, Percent_Identity=26.3440860215054, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=198, Percent_Identity=24.7474747474747, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI6005701, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI116734710, Length=195, Percent_Identity=27.1794871794872, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082268, Length=218, Percent_Identity=41.2844036697248, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1789672, Length=231, Percent_Identity=31.1688311688312, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1789593, Length=214, Percent_Identity=30.8411214953271, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=31.0185185185185, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=29.7071129707113, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788225, Length=216, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787089, Length=240, Percent_Identity=27.5, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788897, Length=203, Percent_Identity=30.0492610837438, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=28.6919831223629, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=25.2252252252252, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786253, Length=238, Percent_Identity=31.0924369747899, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787792, Length=222, Percent_Identity=26.5765765765766, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=25.9911894273128, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788210, Length=200, Percent_Identity=28, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788644, Length=248, Percent_Identity=31.0483870967742, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081782, Length=229, Percent_Identity=28.3842794759825, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787105, Length=205, Percent_Identity=28.780487804878, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=24, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=29.6943231441048, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87081791, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787164, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=21.7777777777778, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=26.3392857142857, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787712, Length=207, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786398, Length=243, Percent_Identity=23.4567901234568, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786698, Length=168, Percent_Identity=29.7619047619048, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786872, Length=220, Percent_Identity=28.6363636363636, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786654, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=26, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1787758, Length=214, Percent_Identity=25.7009345794392, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=25.8373205741627, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788165, Length=156, Percent_Identity=31.4102564102564, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1786703, Length=232, Percent_Identity=29.7413793103448, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17510237, Length=232, Percent_Identity=28.8793103448276, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71996809, Length=211, Percent_Identity=27.4881516587678, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211015, Length=211, Percent_Identity=27.4881516587678, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211017, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565586, Length=154, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71984940, Length=213, Percent_Identity=24.8826291079812, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541710, Length=173, Percent_Identity=30.0578034682081, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=3e-14, Organism=Drosophila melanogaster, GI24666092, Length=225, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24648314, Length=212, Percent_Identity=27.8301886792453, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512771, Length=213, Percent_Identity=24.8826291079812, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24650853, Length=242, Percent_Identity=27.6859504132231, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24650855, Length=242, Percent_Identity=27.6859504132231, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI281362751, Length=213, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574150, Length=146, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007328, Length=146, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725262, Length=217, Percent_Identity=28.110599078341, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24643674, Length=203, Percent_Identity=26.6009852216749, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI21357907, Length=162, Percent_Identity=28.3950617283951, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26569; Mature: 26438
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00435 PEROXIDASE_1 ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPFPAPAPAGEMLRVSGLHAFYGESHVLHGVDLAVAAGEVVTLLGRNGSGRTTTLKAI CCCCCCCCCCCCCCEEHHCCHHHHCCCCEECCHHHHHHHHHEEEEECCCCCCCHHHHHHH LGLTGRRTGSVVVNGRETVRMPTHRIVHLGVGYCPEERGIFSRLTAEENLTLLPEVRSGG HHCCCCCCCCEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCC MPLERIYEMFPNLWERRRSPGSRLSGGEQQMLALARILRTGARLLLLDEITEGLAPVIVQ CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH ALGRAVRALKDHGFTLVLVEQNFRFVAPLADRHLLVERGRVVGEVARAELESRMESLQRF HHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGV HCC >Mature Secondary Structure TAPFPAPAPAGEMLRVSGLHAFYGESHVLHGVDLAVAAGEVVTLLGRNGSGRTTTLKAI CCCCCCCCCCCCCEEHHCCHHHHCCCCEECCHHHHHHHHHEEEEECCCCCCCHHHHHHH LGLTGRRTGSVVVNGRETVRMPTHRIVHLGVGYCPEERGIFSRLTAEENLTLLPEVRSGG HHCCCCCCCCEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCC MPLERIYEMFPNLWERRRSPGSRLSGGEQQMLALARILRTGARLLLLDEITEGLAPVIVQ CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH ALGRAVRALKDHGFTLVLVEQNFRFVAPLADRHLLVERGRVVGEVARAELESRMESLQRF HHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGV HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2195019; 8041620; 9278503 [H]