| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yyaM [H]
Identifier: 220916870
GI number: 220916870
Start: 1974446
End: 1975390
Strand: Reverse
Name: yyaM [H]
Synonym: A2cp1_1766
Alternate gene names: 220916870
Gene position: 1975390-1974446 (Counterclockwise)
Preceding gene: 220916871
Following gene: 220916869
Centisome position: 39.28
GC content: 77.99
Gene sequence:
>945_bases GTGAGCGCGCCCCCGGCCGCGGCCGCCGTGGCCCCGCGCGCGCGAGGCGCGGCCGCCGCCTACCTGTTCCTCGCGCTCGC GGCCGCGTCCTGGTCCGGCAACTTCGTGGTGGGCCGGGCGGTGCACGGCCGCGTGCCGCCGGTCGGCCTCGCGTTCTGGC GCTGGGCGGTGGCGCTCGCGCTGCTCCTCCCGCTGGCGCGGCGCCCGCTGACGGCGCAGTGGCCGACGATCCTCCGCGCG TGGCGGATCGTCATCCCGCTCGGCATCCTGGGCGTCGGCAACTTCAACCTGTTCGTCTACCTCGGCCTCACCCGCACCAC CGCCACCAGCGCGCTCCTGCTCCAGTCGGCCTGCCCCGCGTTCATCGCGGCGCTCTCGCCGCTGCTGGGCGGCGGCCGCC CGGGGCGGCGGCAGGTGGCGGGCATCGCGGTCTCGCTCGCCGGCGTGCTGGTCATCCTGGGGCGCGGGACGCTGTCGGCG CTCGCCGGGCTCGCGTTCGGCCCCGGTGACCTGTGGGTGCTCGCCGCGGTGCTGAGCTGGGCCCTCTACACCCTGCTCCT CGCGCGCCGGCCCGCCGGCGTGGACCCGCTGGCGCTGCTCGCGGCGCTGGTGGCGGTGGGCGTCGCCTGGATCGCGCCGT TCTACGCCTGGGAGCTGGCCTCGGGCGCGCGGATGGCGCTCGACGGGGTGACGGTGGCGAGCGTGGCCTACGTGGCGGTG TTCGCCTCGGTGCTGGCCTACCGGCTCTGGAACGAGGGGGTCGCGCGCGTGGGCGCGAACCGGGCCGGCCCGTTCATCCA CCTCATGCCGGCCTTCGGCTCCCTGCTCGCGGTGGCGCTGCTCGGCGAGGCGTTCCGGCCCTTCCACCTGGCCGGCCTGG CGCTGGTGCTCGGCGGCGTGACGCTCGCCGGGACCTCCGGGCGCCGGGGGCGCGCCACCGCCTGA
Upstream 100 bases:
>100_bases TCGCCGACTACGCCTACGTGATGGAGCGCGGCCGCATCGCCATCGAGGGGACGCCCGCCGAGCTCGCCCGCGACGAGCGC GTGCTCGCGGCCTACCTCGG
Downstream 100 bases:
>100_bases CCGCGCCGCCGGTCCGGCCGGTCCGGACCGATCGGCCGGCCCGGGCCAGCGCCGGCCCGCCCGGCCGCCGGGCGCCGCCC GCGGGCCGCTGCGGGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSAPPAAAAVAPRARGAAAAYLFLALAAASWSGNFVVGRAVHGRVPPVGLAFWRWAVALALLLPLARRPLTAQWPTILRA WRIVIPLGILGVGNFNLFVYLGLTRTTATSALLLQSACPAFIAALSPLLGGGRPGRRQVAGIAVSLAGVLVILGRGTLSA LAGLAFGPGDLWVLAAVLSWALYTLLLARRPAGVDPLALLAALVAVGVAWIAPFYAWELASGARMALDGVTVASVAYVAV FASVLAYRLWNEGVARVGANRAGPFIHLMPAFGSLLAVALLGEAFRPFHLAGLALVLGGVTLAGTSGRRGRATA
Sequences:
>Translated_314_residues MSAPPAAAAVAPRARGAAAAYLFLALAAASWSGNFVVGRAVHGRVPPVGLAFWRWAVALALLLPLARRPLTAQWPTILRA WRIVIPLGILGVGNFNLFVYLGLTRTTATSALLLQSACPAFIAALSPLLGGGRPGRRQVAGIAVSLAGVLVILGRGTLSA LAGLAFGPGDLWVLAAVLSWALYTLLLARRPAGVDPLALLAALVAVGVAWIAPFYAWELASGARMALDGVTVASVAYVAV FASVLAYRLWNEGVARVGANRAGPFIHLMPAFGSLLAVALLGEAFRPFHLAGLALVLGGVTLAGTSGRRGRATA >Mature_313_residues SAPPAAAAVAPRARGAAAAYLFLALAAASWSGNFVVGRAVHGRVPPVGLAFWRWAVALALLLPLARRPLTAQWPTILRAW RIVIPLGILGVGNFNLFVYLGLTRTTATSALLLQSACPAFIAALSPLLGGGRPGRRQVAGIAVSLAGVLVILGRGTLSAL AGLAFGPGDLWVLAAVLSWALYTLLLARRPAGVDPLALLAALVAVGVAWIAPFYAWELASGARMALDGVTVASVAYVAVF ASVLAYRLWNEGVARVGANRAGPFIHLMPAFGSLLAVALLGEAFRPFHLAGLALVLGGVTLAGTSGRRGRATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32243; Mature: 32111
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPPAAAAVAPRARGAAAAYLFLALAAASWSGNFVVGRAVHGRVPPVGLAFWRWAVALA CCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH LLLPLARRPLTAQWPTILRAWRIVIPLGILGVGNFNLFVYLGLTRTTATSALLLQSACPA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH FIAALSPLLGGGRPGRRQVAGIAVSLAGVLVILGRGTLSALAGLAFGPGDLWVLAAVLSW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH ALYTLLLARRPAGVDPLALLAALVAVGVAWIAPFYAWELASGARMALDGVTVASVAYVAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHH FASVLAYRLWNEGVARVGANRAGPFIHLMPAFGSLLAVALLGEAFRPFHLAGLALVLGGV HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC TLAGTSGRRGRATA CEECCCCCCCCCCC >Mature Secondary Structure SAPPAAAAVAPRARGAAAAYLFLALAAASWSGNFVVGRAVHGRVPPVGLAFWRWAVALA CCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH LLLPLARRPLTAQWPTILRAWRIVIPLGILGVGNFNLFVYLGLTRTTATSALLLQSACPA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH FIAALSPLLGGGRPGRRQVAGIAVSLAGVLVILGRGTLSALAGLAFGPGDLWVLAAVLSW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH ALYTLLLARRPAGVDPLALLAALVAVGVAWIAPFYAWELASGARMALDGVTVASVAYVAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHH FASVLAYRLWNEGVARVGANRAGPFIHLMPAFGSLLAVALLGEAFRPFHLAGLALVLGGV HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC TLAGTSGRRGRATA CEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]