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The map label for this gene is ygfK [H]

Identifier: 220916658

GI number: 220916658

Start: 1733828

End: 1735768

Strand: Direct

Name: ygfK [H]

Synonym: A2cp1_1552

Alternate gene names: 220916658

Gene position: 1733828-1735768 (Clockwise)

Preceding gene: 220916655

Following gene: 220916659

Centisome position: 34.47

GC content: 74.7

Gene sequence:

>1941_bases
ATGCGCATCGCGGTGCGGCTCCCGGGCTTCGAGGACTGGCGGGCCCAGGTGAAGTGCCAGGTCGGCTGCCCCGTCGACAC
CGACGGCGGCCGCTACTGCCAGCTCGTCGCGCAGGAGCGGTACGAGGAGGGGTACCTCGTCGCCCGGGCCCCGAATCCGT
TCGCGTCGGTGTGCGGCCGCGTCTGCGCGGCGCCGTGCGAGGACGCCTGCCGCCGCGGCACCATCGACGCGCCCATCACC
ATCCGCGCCCTGAAGCGGACCCTCACCGAGCGCTACGGCGTCGAGTCGGTCCACCCCGACGCGCAGGACCGCCTCCGCGA
GGCGCTGGTGCCGGAGGGCAACCGCTACCCGGGGCACCTCCCCACCGCGCCGCTCCGCCGTCCGGCGCAGGCCGGCGGCC
GCAAGGTCGCGGTGATCGGGGCCGGGCCGGCCGGGCTCTCGGCCGCGCACGATCTCGCGCTGCTCGGCCACGACGTGACG
GTCCTCGAGGCCGCCGAGGAGCCGGGCGGGATGATGCGCTTCGGCATCCCCGAGTACCGGCTGCCCCGCAGCGTGATCCG
CGGGGAGATCGAGAAGATCCTGGCGCTCGGCGTCACGCTCCGGACCAGCGCGCCGCTCACCGCCGAGCGCGGCCTCGCCG
CGCTGAGGGCCGAGGGCTTCGAGGCGTTCTTCCTCTCGGTGGGCGTGCAGAAGGGGCGCGACCTCGCCATCCCCGGCGTC
GAGCTCGACGGCGTGGTCAAGGCGGCCGACTTCCTGCTCAACGCAAACCGCGGCTACCGGATGGACCTGGGCCAGCGCGT
GGTGGTGATCGGCGGCGGGTTCGTGGCGTTCGACGCCGCGCGCATGGCCCTGCGCGCCGGGCGGGAGGACCGCGAGGACG
ACGTCCGCGCCCTGGGCGCGAGCCTGAAGGCGGAGTCGGACGCGCGCCTGGTCGAGGCGCTCGACTCGGCGCGCGCGGCG
GTGCGCGGCGGCGCCGCCGAGGTGACCATCGTCTCGCTGGAGAGCTTCACCGAGATGCCGGTCCTGCGGACCGCGCAGGG
GCACGAGGAGTTCCAGGAGGCGAAGAAGGAGGGGATCCGCTTCGAGCCGCGGCGCGGGCCGAAGCGGTTCGTGGGGTCCG
GCCGGCTCGAGGCGGTCGAGCTGCGCGCGGTGACGCGGGTCTTCGACGACGCGGGCCGCTTCTCGCCCGCCTACGACGAC
CAGGACGTCGTCGCCGTCCCCGCGGACGGCTGCATCCTCGCCATCGGCCAGCGCGCCGACCTCTCCTTCCTCCGCCCCGA
GGACGGGGTGGAGCTCACGCCGGCGGGGACGATCAAGGTGGACCGGACCACGCTCGCGACCAGCGCGCCGGGCGTCTACG
CCGGCGGCGACGTGGCGTTCGGTCCCCGGAACCTCATCGAGGCGATCGCGAACGGGAAGCGGGCCGCGCGCTCCATCCAC
GAGCACCTGTCGGGCGAGGCCGCCCGGCTCGAGGCGATCATCTCCGTCCAGAAGATCCCCACCCGCGACTACCGGATGAT
CGCCGGCTTCGAGCTGCTCGACCGCGAGGCGCCCCCCACGCTCGACCTGGGGCGGCGGAGCGGCATCGCCGAGGTGGAGA
GCGCGTTCGCGGCCGACGAGGCCATCGCGCAGGGCGCGCGCTGCCTCGTCTGCCACGTCCAGACCATCTACGATCCGGAG
AAGTGCGTGCTCTGCGGGCGCTGCGTGGACGTGTGCCCGGAGTACTGCCTGGCGCTGGTGCCGCTCGAGGACGTGGACCT
GCCGGAGGAGGAGCGGCGGGCGCTCGCCGCGGCGGCCGAGGCCGGCGGCCTGCCGCTCTCCGCCATGATCAAGGACGACG
CGCCCTGCATCCGGTGCGGGCTCTGCGCCATCCGCTGTCCGACCGACGCGATGACGATGGAACGGTTCCAGCTCACGCAG
CGCTACGCCCCCGCGGCCTAG

Upstream 100 bases:

>100_bases
AGGGTCTGCGCGGCGCTGCATGGTTTCCGGGCACGGGGATCCGGCGCGGCGGGGCCGGTGCGGGCGGCGGCGGGTGCGTT
CCATGGCGAGCGAGGTCCCG

Downstream 100 bases:

>100_bases
CGGGGGCGCCGAGGTTCGCCATGGCCGAGCGGAAGGACCGAAGGGACTTCCTCGTGGGCGTCGGGATCGGCGCCGGGGTG
GTGGCGCTGGGCGGCCAGGG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MRIAVRLPGFEDWRAQVKCQVGCPVDTDGGRYCQLVAQERYEEGYLVARAPNPFASVCGRVCAAPCEDACRRGTIDAPIT
IRALKRTLTERYGVESVHPDAQDRLREALVPEGNRYPGHLPTAPLRRPAQAGGRKVAVIGAGPAGLSAAHDLALLGHDVT
VLEAAEEPGGMMRFGIPEYRLPRSVIRGEIEKILALGVTLRTSAPLTAERGLAALRAEGFEAFFLSVGVQKGRDLAIPGV
ELDGVVKAADFLLNANRGYRMDLGQRVVVIGGGFVAFDAARMALRAGREDREDDVRALGASLKAESDARLVEALDSARAA
VRGGAAEVTIVSLESFTEMPVLRTAQGHEEFQEAKKEGIRFEPRRGPKRFVGSGRLEAVELRAVTRVFDDAGRFSPAYDD
QDVVAVPADGCILAIGQRADLSFLRPEDGVELTPAGTIKVDRTTLATSAPGVYAGGDVAFGPRNLIEAIANGKRAARSIH
EHLSGEAARLEAIISVQKIPTRDYRMIAGFELLDREAPPTLDLGRRSGIAEVESAFAADEAIAQGARCLVCHVQTIYDPE
KCVLCGRCVDVCPEYCLALVPLEDVDLPEEERRALAAAAEAGGLPLSAMIKDDAPCIRCGLCAIRCPTDAMTMERFQLTQ
RYAPAA

Sequences:

>Translated_646_residues
MRIAVRLPGFEDWRAQVKCQVGCPVDTDGGRYCQLVAQERYEEGYLVARAPNPFASVCGRVCAAPCEDACRRGTIDAPIT
IRALKRTLTERYGVESVHPDAQDRLREALVPEGNRYPGHLPTAPLRRPAQAGGRKVAVIGAGPAGLSAAHDLALLGHDVT
VLEAAEEPGGMMRFGIPEYRLPRSVIRGEIEKILALGVTLRTSAPLTAERGLAALRAEGFEAFFLSVGVQKGRDLAIPGV
ELDGVVKAADFLLNANRGYRMDLGQRVVVIGGGFVAFDAARMALRAGREDREDDVRALGASLKAESDARLVEALDSARAA
VRGGAAEVTIVSLESFTEMPVLRTAQGHEEFQEAKKEGIRFEPRRGPKRFVGSGRLEAVELRAVTRVFDDAGRFSPAYDD
QDVVAVPADGCILAIGQRADLSFLRPEDGVELTPAGTIKVDRTTLATSAPGVYAGGDVAFGPRNLIEAIANGKRAARSIH
EHLSGEAARLEAIISVQKIPTRDYRMIAGFELLDREAPPTLDLGRRSGIAEVESAFAADEAIAQGARCLVCHVQTIYDPE
KCVLCGRCVDVCPEYCLALVPLEDVDLPEEERRALAAAAEAGGLPLSAMIKDDAPCIRCGLCAIRCPTDAMTMERFQLTQ
RYAPAA
>Mature_646_residues
MRIAVRLPGFEDWRAQVKCQVGCPVDTDGGRYCQLVAQERYEEGYLVARAPNPFASVCGRVCAAPCEDACRRGTIDAPIT
IRALKRTLTERYGVESVHPDAQDRLREALVPEGNRYPGHLPTAPLRRPAQAGGRKVAVIGAGPAGLSAAHDLALLGHDVT
VLEAAEEPGGMMRFGIPEYRLPRSVIRGEIEKILALGVTLRTSAPLTAERGLAALRAEGFEAFFLSVGVQKGRDLAIPGV
ELDGVVKAADFLLNANRGYRMDLGQRVVVIGGGFVAFDAARMALRAGREDREDDVRALGASLKAESDARLVEALDSARAA
VRGGAAEVTIVSLESFTEMPVLRTAQGHEEFQEAKKEGIRFEPRRGPKRFVGSGRLEAVELRAVTRVFDDAGRFSPAYDD
QDVVAVPADGCILAIGQRADLSFLRPEDGVELTPAGTIKVDRTTLATSAPGVYAGGDVAFGPRNLIEAIANGKRAARSIH
EHLSGEAARLEAIISVQKIPTRDYRMIAGFELLDREAPPTLDLGRRSGIAEVESAFAADEAIAQGARCLVCHVQTIYDPE
KCVLCGRCVDVCPEYCLALVPLEDVDLPEEERRALAAAAEAGGLPLSAMIKDDAPCIRCGLCAIRCPTDAMTMERFQLTQ
RYAPAA

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119943098, Length=483, Percent_Identity=27.9503105590062, Blast_Score=148, Evalue=2e-35,
Organism=Escherichia coli, GI1789243, Length=615, Percent_Identity=28.4552845528455, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1788468, Length=474, Percent_Identity=30.379746835443, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1789606, Length=473, Percent_Identity=26.215644820296, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI87082180, Length=484, Percent_Identity=26.6528925619835, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1788811, Length=491, Percent_Identity=25.050916496945, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71984108, Length=494, Percent_Identity=26.1133603238866, Blast_Score=123, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17570289, Length=499, Percent_Identity=25.0501002004008, Blast_Score=120, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320030, Length=521, Percent_Identity=24.9520153550864, Blast_Score=113, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24665547, Length=493, Percent_Identity=26.5720081135903, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24665543, Length=493, Percent_Identity=26.5720081135903, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI28574881, Length=493, Percent_Identity=26.5720081135903, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24665539, Length=493, Percent_Identity=26.5720081135903, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24640763, Length=502, Percent_Identity=27.2908366533865, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI18858217, Length=502, Percent_Identity=27.2908366533865, Blast_Score=108, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013785
- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR016040
- InterPro:   IPR017701 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 69385; Mature: 69385

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVRLPGFEDWRAQVKCQVGCPVDTDGGRYCQLVAQERYEEGYLVARAPNPFASVCGR
CEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHCCCCEEEEECCCHHHHHHHH
VCAAPCEDACRRGTIDAPITIRALKRTLTERYGVESVHPDAQDRLREALVPEGNRYPGHL
HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PTAPLRRPAQAGGRKVAVIGAGPAGLSAAHDLALLGHDVTVLEAAEEPGGMMRFGIPEYR
CCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHH
LPRSVIRGEIEKILALGVTLRTSAPLTAERGLAALRAEGFEAFFLSVGVQKGRDLAIPGV
CCHHHHHHHHHHHHHHCEEEECCCCCCHHHCHHHHHHCCCCEEEEEHHHCCCCEEECCCC
ELDGVVKAADFLLNANRGYRMDLGQRVVVIGGGFVAFDAARMALRAGREDREDDVRALGA
CCCHHHHHHHHHEECCCCCEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLKAESDARLVEALDSARAAVRGGAAEVTIVSLESFTEMPVLRTAQGHEEFQEAKKEGIR
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHCCCCHHHHHHHHHCCCE
FEPRRGPKRFVGSGRLEAVELRAVTRVFDDAGRFSPAYDDQDVVAVPADGCILAIGQRAD
ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCC
LSFLRPEDGVELTPAGTIKVDRTTLATSAPGVYAGGDVAFGPRNLIEAIANGKRAARSIH
CEEECCCCCCEECCCCEEEECCEEEECCCCCCEECCCCCCCHHHHHHHHHCCHHHHHHHH
EHLSGEAARLEAIISVQKIPTRDYRMIAGFELLDREAPPTLDLGRRSGIAEVESAFAADE
HHHCCCHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
AIAQGARCLVCHVQTIYDPEKCVLCGRCVDVCPEYCLALVPLEDVDLPEEERRALAAAAE
HHHCCCEEEEEEEHHHCCCHHHEEHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH
AGGLPLSAMIKDDAPCIRCGLCAIRCPTDAMTMERFQLTQRYAPAA
CCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIAVRLPGFEDWRAQVKCQVGCPVDTDGGRYCQLVAQERYEEGYLVARAPNPFASVCGR
CEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHCCCCEEEEECCCHHHHHHHH
VCAAPCEDACRRGTIDAPITIRALKRTLTERYGVESVHPDAQDRLREALVPEGNRYPGHL
HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PTAPLRRPAQAGGRKVAVIGAGPAGLSAAHDLALLGHDVTVLEAAEEPGGMMRFGIPEYR
CCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHH
LPRSVIRGEIEKILALGVTLRTSAPLTAERGLAALRAEGFEAFFLSVGVQKGRDLAIPGV
CCHHHHHHHHHHHHHHCEEEECCCCCCHHHCHHHHHHCCCCEEEEEHHHCCCCEEECCCC
ELDGVVKAADFLLNANRGYRMDLGQRVVVIGGGFVAFDAARMALRAGREDREDDVRALGA
CCCHHHHHHHHHEECCCCCEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
SLKAESDARLVEALDSARAAVRGGAAEVTIVSLESFTEMPVLRTAQGHEEFQEAKKEGIR
HCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHCCCCHHHHHHHHHCCCE
FEPRRGPKRFVGSGRLEAVELRAVTRVFDDAGRFSPAYDDQDVVAVPADGCILAIGQRAD
ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCC
LSFLRPEDGVELTPAGTIKVDRTTLATSAPGVYAGGDVAFGPRNLIEAIANGKRAARSIH
CEEECCCCCCEECCCCEEEECCEEEECCCCCCEECCCCCCCHHHHHHHHHCCHHHHHHHH
EHLSGEAARLEAIISVQKIPTRDYRMIAGFELLDREAPPTLDLGRRSGIAEVESAFAADE
HHHCCCHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
AIAQGARCLVCHVQTIYDPEKCVLCGRCVDVCPEYCLALVPLEDVDLPEEERRALAAAAE
HHHCCCEEEEEEEHHHCCCHHHEEHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH
AGGLPLSAMIKDDAPCIRCGLCAIRCPTDAMTMERFQLTQRYAPAA
CCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]