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The map label for this gene is ybbC [H]

Identifier: 220916653

GI number: 220916653

Start: 1727885

End: 1729126

Strand: Direct

Name: ybbC [H]

Synonym: A2cp1_1547

Alternate gene names: 220916653

Gene position: 1727885-1729126 (Clockwise)

Preceding gene: 220916652

Following gene: 220916654

Centisome position: 34.36

GC content: 76.57

Gene sequence:

>1242_bases
ATGAGCCCACGCCGACCGCCGACCCCACGAACGCGCCCGCGCGCCCCGCGCCGCGGCCCGGTCCGCTCCGGCCTGGACGT
GCTGGCCGCGCGCCGCTTCGCGCCGCTGCGCGGGCGCGCGGTGGGCCTGGTGTGCAACCCGACCGCGGTCACCTCGCGGC
TCGTGCACGCGGCCGACCTGCTGCACGGCGCGCGCGGCGTGCGGCTCGCGGCGCTGTTCGGGCCGGAGCACGGCGTCCGG
GGCGACGCGCAGTACATGGCGGCGGTGGAGGGCGACCGCGATCCCCGCACCGGCGTGCCGGTGCACTCGCTCTACGGGGC
CACGCCGGCGTCGCTGAAGCCGCGGCCGGAGCACCTGGCGGGCCTGGACGCGCTGGTGTTCGACATCCAGGACGTCGGCA
CGCGCTTCTACACGTACCAGGCCACCATGATGCTGTGCATGGAGGCGGCCGCCGCGGCGCGGCTCGCGTTCGTGGTGCTG
GACCGGCCCGACCCCATCGACGGGGTGCGGGTGGAGGGCCCCGCGCTGCGCCCGGGCTTCGAGAGCTTCTGCGGGCTGCA
CGATCTGGCGGTGCGCCACGGCATGACGGTGGGCGAGCTGGCGCTGCTGTTCCGCGCCGAGCGGCGGCTCGACCTCGAGC
TCGAGATCGTGCCGTGCGAGGGGTGGCGGCGCGGGCAGCGCTTCCGCGACACCGGCCTGCCCTGGGTGTTCCCGTCGCCC
AACATGCCCACGCCGGAGACCGCGCTGGTCTATCCGGGCATGTGCCTGCTCGAGGGCACCAACCTGTCGGAGGGGCGCGG
CACCACCCGTCCGTTCGAGCTGTTCGGCGCGCCCTGGCTGGACGGCGCGCGCCTCGCGGCCGACCTCGCGCGCGACCGCC
TCCCGGGCGTGGCCTTCCGCCCGGTGAGCTTCGTGCCGACCTGGGATAAGCACGCCGGAATCCGCTGCCACGGCGTGGAG
CTGCACGTGACCGAGCCCGAGCGCTTCCGCCCGTTCCGCACCGGCCTCGCCTGCGTCATCCGCGCCCGCGCCCAGGAGCC
GGCCCGGTTCGCCTGGCGCACCGAGCCGTACGAGTTCGTGGCGGACGTCCCGGCGTTCGACCTGCTGTGCGGCTCGGCCC
GGGAGCGCGAGGGCATCGAGGCGGGGGCCTCGGCCGCCGAGCTGGCACGGGCGTTCGCGCCGGAGGAGCGGGCCTTCGCC
CGCCGTCGCGCGCCCTTCCTGCGCTATCGCGACCTGCGCTAG

Upstream 100 bases:

>100_bases
CGCGTCGTCGCAGGGCCGCGGAAGGCGCTGCACGCGCGCGCCGCCGCGAGGTACAACGTCGCGAGCCGCCCGGCCCGGGC
GGCCCCGCGAGCCCCCACGC

Downstream 100 bases:

>100_bases
CCTTCCCTGGTCCTCTCCCCCGGAGCCCACGTGCGCATCGGCCTGGCCAGCGACAGCGACGGCGACGTGGGCGCGCTCGT
GCGCGCGCTCGACGTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSPRRPPTPRTRPRAPRRGPVRSGLDVLAARRFAPLRGRAVGLVCNPTAVTSRLVHAADLLHGARGVRLAALFGPEHGVR
GDAQYMAAVEGDRDPRTGVPVHSLYGATPASLKPRPEHLAGLDALVFDIQDVGTRFYTYQATMMLCMEAAAAARLAFVVL
DRPDPIDGVRVEGPALRPGFESFCGLHDLAVRHGMTVGELALLFRAERRLDLELEIVPCEGWRRGQRFRDTGLPWVFPSP
NMPTPETALVYPGMCLLEGTNLSEGRGTTRPFELFGAPWLDGARLAADLARDRLPGVAFRPVSFVPTWDKHAGIRCHGVE
LHVTEPERFRPFRTGLACVIRARAQEPARFAWRTEPYEFVADVPAFDLLCGSAREREGIEAGASAAELARAFAPEERAFA
RRRAPFLRYRDLR

Sequences:

>Translated_413_residues
MSPRRPPTPRTRPRAPRRGPVRSGLDVLAARRFAPLRGRAVGLVCNPTAVTSRLVHAADLLHGARGVRLAALFGPEHGVR
GDAQYMAAVEGDRDPRTGVPVHSLYGATPASLKPRPEHLAGLDALVFDIQDVGTRFYTYQATMMLCMEAAAAARLAFVVL
DRPDPIDGVRVEGPALRPGFESFCGLHDLAVRHGMTVGELALLFRAERRLDLELEIVPCEGWRRGQRFRDTGLPWVFPSP
NMPTPETALVYPGMCLLEGTNLSEGRGTTRPFELFGAPWLDGARLAADLARDRLPGVAFRPVSFVPTWDKHAGIRCHGVE
LHVTEPERFRPFRTGLACVIRARAQEPARFAWRTEPYEFVADVPAFDLLCGSAREREGIEAGASAAELARAFAPEERAFA
RRRAPFLRYRDLR
>Mature_412_residues
SPRRPPTPRTRPRAPRRGPVRSGLDVLAARRFAPLRGRAVGLVCNPTAVTSRLVHAADLLHGARGVRLAALFGPEHGVRG
DAQYMAAVEGDRDPRTGVPVHSLYGATPASLKPRPEHLAGLDALVFDIQDVGTRFYTYQATMMLCMEAAAAARLAFVVLD
RPDPIDGVRVEGPALRPGFESFCGLHDLAVRHGMTVGELALLFRAERRLDLELEIVPCEGWRRGQRFRDTGLPWVFPSPN
MPTPETALVYPGMCLLEGTNLSEGRGTTRPFELFGAPWLDGARLAADLARDRLPGVAFRPVSFVPTWDKHAGIRCHGVEL
HVTEPERFRPFRTGLACVIRARAQEPARFAWRTEPYEFVADVPAFDLLCGSAREREGIEAGASAAELARAFAPEERAFAR
RRAPFLRYRDLR

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45617; Mature: 45486

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRRPPTPRTRPRAPRRGPVRSGLDVLAARRFAPLRGRAVGLVCNPTAVTSRLVHAADL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHH
LHGARGVRLAALFGPEHGVRGDAQYMAAVEGDRDPRTGVPVHSLYGATPASLKPRPEHLA
HHCCCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHH
GLDALVFDIQDVGTRFYTYQATMMLCMEAAAAARLAFVVLDRPDPIDGVRVEGPALRPGF
CHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCCCCH
ESFCGLHDLAVRHGMTVGELALLFRAERRLDLELEIVPCEGWRRGQRFRDTGLPWVFPSP
HHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEECCCC
NMPTPETALVYPGMCLLEGTNLSEGRGTTRPFELFGAPWLDGARLAADLARDRLPGVAFR
CCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEC
PVSFVPTWDKHAGIRCHGVELHVTEPERFRPFRTGLACVIRARAQEPARFAWRTEPYEFV
CEEECCCCCCCCCEEEEEEEEEECCHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCHHHH
ADVPAFDLLCGSAREREGIEAGASAAELARAFAPEERAFARRRAPFLRYRDLR
HCCCHHHHHHCCCHHHCCHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure 
SPRRPPTPRTRPRAPRRGPVRSGLDVLAARRFAPLRGRAVGLVCNPTAVTSRLVHAADL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHH
LHGARGVRLAALFGPEHGVRGDAQYMAAVEGDRDPRTGVPVHSLYGATPASLKPRPEHLA
HHCCCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHH
GLDALVFDIQDVGTRFYTYQATMMLCMEAAAAARLAFVVLDRPDPIDGVRVEGPALRPGF
CHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCCCCH
ESFCGLHDLAVRHGMTVGELALLFRAERRLDLELEIVPCEGWRRGQRFRDTGLPWVFPSP
HHHHCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEECCCC
NMPTPETALVYPGMCLLEGTNLSEGRGTTRPFELFGAPWLDGARLAADLARDRLPGVAFR
CCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEC
PVSFVPTWDKHAGIRCHGVELHVTEPERFRPFRTGLACVIRARAQEPARFAWRTEPYEFV
CEEECCCCCCCCCEEEEEEEEEECCHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCHHHH
ADVPAFDLLCGSAREREGIEAGASAAELARAFAPEERAFARRRAPFLRYRDLR
HCCCHHHHHHCCCHHHCCHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]