| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is pimA [H]
Identifier: 220916646
GI number: 220916646
Start: 1720400
End: 1721512
Strand: Direct
Name: pimA [H]
Synonym: A2cp1_1540
Alternate gene names: 220916646
Gene position: 1720400-1721512 (Clockwise)
Preceding gene: 220916645
Following gene: 220916647
Centisome position: 34.21
GC content: 74.75
Gene sequence:
>1113_bases GTGAAGATCGGCGTCGTCACCGAGTACTACTACCCGAGCGTCGGGGGCATCCAGGAGCACGTCCACCACTTCGCCCGCGA GGCGAGGCGGCTCGGGCACACGGTCCGGATCGTCACCTCGGCCATGCCGGACCTGGGCGACGGAGCGGCCACGCCGCAGC CCGACGTGATCCGCCTGGGCCGCAGCCTGCCGGCGTACACCAACGGCGGCTTCGGCCGCGTCACCGGCGGGCTCGGCATC CGCGGCGCCGTGCGGGAGGTGCTCGCCCGCGAGCGCTTCGACGTGGTCCACGTGCACGCGCCGCTCACCCCGGTGCTGCC CCTGCTCGCGATCCACCAGGCCACCGGGCCGATCGTCGGCACGTTCCACACCAACTTCCGGCCCGGCCTGCTGTTCCGGA TGATGCGCGGGCCGCTGCAGCGCTACCTCGACCGGCTCGACGCGGCGGTGGCGGTCTCGCAGGCCTGCCTGGGCGCGTTC CGCGATCGCCTGCACGCGGACTTCCGCATCATCCCGAACGGCGTGGACACCGAGCGCTTCGCGCGCGGGCGCCGCATCCG CCGCTACGACGACGGCAAGCTGAACGTGCTGTTCGTGGGCCGGCTCGAGCCGCGCAACGGCCTCGACCGGCTGCTCGCGG CGTTCCACCGCGCCTGGCGCCAGGTGGGGGCGCGCCTGATCGTTCTGGGCGACGGCCCGCTCCTGCCGCGCTATCGTGCC ATGGTGCCGCGCGAGCTGCGGGAGGACGTGGTGTTCGCGGGACGAGTGCTCGACGAGCGCCCGGACTGGTACGCCACCGC CGACGTGTACTGCGCGCCGACGCGCGTGGCGAGCTTCGGGGTGACGCTGCTCGAGGCGATGGCGGCGGGCAAGCCGGTGC TGGCCGCGGACATCGACGGCTTCCGGGAGGTCATGCAGCACGGCCGCGAGGGCGAGCTGCTCTCCGGCGACGATCCCGCC GCGTGGGCGCGGGCGCTGGTGCGCATCGCGCGCGAGCCGGCCCGCGCGCAGGCGTACGGCGAGCGCGGCCGCCTCACCGC CCAGCGCTACGCCTGGCCCTCGGTGACGCGCGAGGTGCTCGGGCTGTACCGCTCCATCGGCGTCCGGGGCTGA
Upstream 100 bases:
>100_bases ACCCCGCTGGCGCGGCGCGAGGCGCGCGTGATCCCGTTCCAGCGCCGCCGCCAGGCGATGCCTCGCTGACGGCGCCCCTC CGCCGGAGGGGAGGTGCCCC
Downstream 100 bases:
>100_bases GGCGCGCGTGCCGGCCCGCAAGCGGCTCGCGGTGGCGCTGGCGGTGCTCGGGGGCGTGGCGCTGCTCGCGCTGGCGGCGT GGCTGGCGATCCGGGGACGC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKIGVVTEYYYPSVGGIQEHVHHFAREARRLGHTVRIVTSAMPDLGDGAATPQPDVIRLGRSLPAYTNGGFGRVTGGLGI RGAVREVLARERFDVVHVHAPLTPVLPLLAIHQATGPIVGTFHTNFRPGLLFRMMRGPLQRYLDRLDAAVAVSQACLGAF RDRLHADFRIIPNGVDTERFARGRRIRRYDDGKLNVLFVGRLEPRNGLDRLLAAFHRAWRQVGARLIVLGDGPLLPRYRA MVPRELREDVVFAGRVLDERPDWYATADVYCAPTRVASFGVTLLEAMAAGKPVLAADIDGFREVMQHGREGELLSGDDPA AWARALVRIAREPARAQAYGERGRLTAQRYAWPSVTREVLGLYRSIGVRG
Sequences:
>Translated_370_residues MKIGVVTEYYYPSVGGIQEHVHHFAREARRLGHTVRIVTSAMPDLGDGAATPQPDVIRLGRSLPAYTNGGFGRVTGGLGI RGAVREVLARERFDVVHVHAPLTPVLPLLAIHQATGPIVGTFHTNFRPGLLFRMMRGPLQRYLDRLDAAVAVSQACLGAF RDRLHADFRIIPNGVDTERFARGRRIRRYDDGKLNVLFVGRLEPRNGLDRLLAAFHRAWRQVGARLIVLGDGPLLPRYRA MVPRELREDVVFAGRVLDERPDWYATADVYCAPTRVASFGVTLLEAMAAGKPVLAADIDGFREVMQHGREGELLSGDDPA AWARALVRIAREPARAQAYGERGRLTAQRYAWPSVTREVLGLYRSIGVRG >Mature_370_residues MKIGVVTEYYYPSVGGIQEHVHHFAREARRLGHTVRIVTSAMPDLGDGAATPQPDVIRLGRSLPAYTNGGFGRVTGGLGI RGAVREVLARERFDVVHVHAPLTPVLPLLAIHQATGPIVGTFHTNFRPGLLFRMMRGPLQRYLDRLDAAVAVSQACLGAF RDRLHADFRIIPNGVDTERFARGRRIRRYDDGKLNVLFVGRLEPRNGLDRLLAAFHRAWRQVGARLIVLGDGPLLPRYRA MVPRELREDVVFAGRVLDERPDWYATADVYCAPTRVASFGVTLLEAMAAGKPVLAADIDGFREVMQHGREGELLSGDDPA AWARALVRIAREPARAQAYGERGRLTAQRYAWPSVTREVLGLYRSIGVRG
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI9755344, Length=388, Percent_Identity=23.9690721649485, Blast_Score=96, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 41031; Mature: 41031
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVVTEYYYPSVGGIQEHVHHFAREARRLGHTVRIVTSAMPDLGDGAATPQPDVIRLG CCCEEEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHC RSLPAYTNGGFGRVTGGLGIRGAVREVLARERFDVVHVHAPLTPVLPLLAIHQATGPIVG CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEE TFHTNFRPGLLFRMMRGPLQRYLDRLDAAVAVSQACLGAFRDRLHADFRIIPNGVDTERF EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH ARGRRIRRYDDGKLNVLFVGRLEPRNGLDRLLAAFHRAWRQVGARLIVLGDGPLLPRYRA HCCCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHH MVPRELREDVVFAGRVLDERPDWYATADVYCAPTRVASFGVTLLEAMAAGKPVLAADIDG HCCHHHHHHHHHHHHHHCCCCCCEEECCEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH FREVMQHGREGELLSGDDPAAWARALVRIAREPARAQAYGERGRLTAQRYAWPSVTREVL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHCCHHHHHHHH GLYRSIGVRG HHHHHHCCCC >Mature Secondary Structure MKIGVVTEYYYPSVGGIQEHVHHFAREARRLGHTVRIVTSAMPDLGDGAATPQPDVIRLG CCCEEEEHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHC RSLPAYTNGGFGRVTGGLGIRGAVREVLARERFDVVHVHAPLTPVLPLLAIHQATGPIVG CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEE TFHTNFRPGLLFRMMRGPLQRYLDRLDAAVAVSQACLGAFRDRLHADFRIIPNGVDTERF EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH ARGRRIRRYDDGKLNVLFVGRLEPRNGLDRLLAAFHRAWRQVGARLIVLGDGPLLPRYRA HCCCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHH MVPRELREDVVFAGRVLDERPDWYATADVYCAPTRVASFGVTLLEAMAAGKPVLAADIDG HCCHHHHHHHHHHHHHHCCCCCCEEECCEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH FREVMQHGREGELLSGDDPAAWARALVRIAREPARAQAYGERGRLTAQRYAWPSVTREVL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHCCHHHHHHHH GLYRSIGVRG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]