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The map label for this gene is ykoX [H]

Identifier: 220916510

GI number: 220916510

Start: 1570289

End: 1570945

Strand: Direct

Name: ykoX [H]

Synonym: A2cp1_1404

Alternate gene names: 220916510

Gene position: 1570289-1570945 (Clockwise)

Preceding gene: 220916509

Following gene: 220916511

Centisome position: 31.22

GC content: 69.71

Gene sequence:

>657_bases
ATGATCTCCAAGGTGATCGAGGCGCTGGCGGTGTTCACCACGTCGGTGATCTCGTCGATGGGCTACGGCGGCATCGTGCT
GCTGATGGCCATCGAGAGCGCGTGCATCCCGCTGCCCTCCGAGATCATCATGCCGTTCGCCGGGTACCTCGTGTACCGGG
GCGAGATGACGCTGCACGGCGCGGCGCTGGCCGGCGCCATCGGCTGCGTGGTCGGCTCCATCCCGGCCTACTACCTGGGC
CAGTTCGGCGGCCGGCCGCTCATCGAGAAGTACGGCCGCTACGTGCTCCTCTCGCACAAGGAGCTCGACCTCGCCGACCG
GCTGTTCCAGCGCTGGGGCCAGTGGGTGGTGTTCGCGGGCCGGCTGCTCCCGGTGATCCGCACGTTCATCGCGTTCCCCG
CCGGCGTGTCGCGCATGCCGATGGGCAAGTTCGTCCTCTACACGTTCGTGGGCTCGTACCCCTGGTGCTACGCGCTCGCG
TGGGTGGGCGAGTGGGCCGGCGAGGCGTGGCACACCGATCCGCGGGTCAAGGCGATCTACCACCGCTTCGAGCTCGTCAT
CGTCGTGGCCGGCGTGCTCGCCGTCGCCTGGTTCGTCTGGCACAAGGTGAAGGAGGCGCGCCGCGCCCGCGTGCCGGCCG
CCGCCGACGAGGGCTGA

Upstream 100 bases:

>100_bases
AGCCGCCGGAGCAGGATTGCACCTGCCCCTACGAGGCGGTCTACTACCCCGCCGACGCGGCCGCGCGAGGCGGCCCGGCG
GGCGGGGACGGCGAGGGCGA

Downstream 100 bases:

>100_bases
CGACCGCCGTGCGCCGCCCGCTCGCCACCGCCGCGGCGCTGGCCGCCGCGCTCGCCGCGGCCGCGGTCCCCGCGCGCGCC
GAGGAGCTGATCCGCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MISKVIEALAVFTTSVISSMGYGGIVLLMAIESACIPLPSEIIMPFAGYLVYRGEMTLHGAALAGAIGCVVGSIPAYYLG
QFGGRPLIEKYGRYVLLSHKELDLADRLFQRWGQWVVFAGRLLPVIRTFIAFPAGVSRMPMGKFVLYTFVGSYPWCYALA
WVGEWAGEAWHTDPRVKAIYHRFELVIVVAGVLAVAWFVWHKVKEARRARVPAAADEG

Sequences:

>Translated_218_residues
MISKVIEALAVFTTSVISSMGYGGIVLLMAIESACIPLPSEIIMPFAGYLVYRGEMTLHGAALAGAIGCVVGSIPAYYLG
QFGGRPLIEKYGRYVLLSHKELDLADRLFQRWGQWVVFAGRLLPVIRTFIAFPAGVSRMPMGKFVLYTFVGSYPWCYALA
WVGEWAGEAWHTDPRVKAIYHRFELVIVVAGVLAVAWFVWHKVKEARRARVPAAADEG
>Mature_218_residues
MISKVIEALAVFTTSVISSMGYGGIVLLMAIESACIPLPSEIIMPFAGYLVYRGEMTLHGAALAGAIGCVVGSIPAYYLG
QFGGRPLIEKYGRYVLLSHKELDLADRLFQRWGQWVVFAGRLLPVIRTFIAFPAGVSRMPMGKFVLYTFVGSYPWCYALA
WVGEWAGEAWHTDPRVKAIYHRFELVIVVAGVLAVAWFVWHKVKEARRARVPAAADEG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24088; Mature: 24088

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKVIEALAVFTTSVISSMGYGGIVLLMAIESACIPLPSEIIMPFAGYLVYRGEMTLHG
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCEEHH
AALAGAIGCVVGSIPAYYLGQFGGRPLIEKYGRYVLLSHKELDLADRLFQRWGQWVVFAG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
RLLPVIRTFIAFPAGVSRMPMGKFVLYTFVGSYPWCYALAWVGEWAGEAWHTDPRVKAIY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
HRFELVIVVAGVLAVAWFVWHKVKEARRARVPAAADEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MISKVIEALAVFTTSVISSMGYGGIVLLMAIESACIPLPSEIIMPFAGYLVYRGEMTLHG
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCEEHH
AALAGAIGCVVGSIPAYYLGQFGGRPLIEKYGRYVLLSHKELDLADRLFQRWGQWVVFAG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
RLLPVIRTFIAFPAGVSRMPMGKFVLYTFVGSYPWCYALAWVGEWAGEAWHTDPRVKAIY
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
HRFELVIVVAGVLAVAWFVWHKVKEARRARVPAAADEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]