Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 220916501

GI number: 220916501

Start: 1561618

End: 1561980

Strand: Direct

Name: dksA [H]

Synonym: A2cp1_1395

Alternate gene names: 220916501

Gene position: 1561618-1561980 (Clockwise)

Preceding gene: 220916498

Following gene: 220916503

Centisome position: 31.05

GC content: 61.71

Gene sequence:

>363_bases
TTGAACAAGAAGGATCTCAAGAGGTTCAAGACGATGCTGGAGGAGTCCAAGCGCCAGCTCCTCGTGCAGGCCAAGAAGAC
CCTGACCGAGGAATCGTCCTTCGACACGGACGACCTCCCGGACGAGATCGACCTGGCCTCGAGCGAGTACACGCAGTCGA
TGATCTTCCGGCTGCGGGATCGCGAGAAGTTCCTGCTCGCCAAGATCGACAAGGCGCTCGCCCGGATCGAGAACGGCACG
TTCGGCATCTGCGAGAAGTGCGAGGAGGAGATCTCGGCCAAGCGCCTCGAGGCGCGGCCGGTGACCACCCTCTGCATCCG
CTGCAAGGAGGAGCAGGAGCAGAAGGAGAAGTCCTTCGGCTAG

Upstream 100 bases:

>100_bases
TCCGCGGGCGCCCCCTCACCTTGACACGGGCACCCCTGCCGTTTAGGTTCTCGGCCTTCATTTTCCGGCCCCAGGCCTCG
GGGCGGAGCGGGGTGCACGC

Downstream 100 bases:

>100_bases
CTGCGCCGCCGGGAGCCTCGGGTCGTGCGCGCGGCCGGGCGGAGACGCCCGGCCGTCGTGTTCTCCGGCCCGTCAGGCCT
CCACGCGCAGCAGCTGGGCG

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MNKKDLKRFKTMLEESKRQLLVQAKKTLTEESSFDTDDLPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGT
FGICEKCEEEISAKRLEARPVTTLCIRCKEEQEQKEKSFG

Sequences:

>Translated_120_residues
MNKKDLKRFKTMLEESKRQLLVQAKKTLTEESSFDTDDLPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGT
FGICEKCEEEISAKRLEARPVTTLCIRCKEEQEQKEKSFG
>Mature_120_residues
MNKKDLKRFKTMLEESKRQLLVQAKKTLTEESSFDTDDLPDEIDLASSEYTQSMIFRLRDREKFLLAKIDKALARIENGT
FGICEKCEEEISAKRLEARPVTTLCIRCKEEQEQKEKSFG

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=120, Percent_Identity=40, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 14013; Mature: 14013

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKDLKRFKTMLEESKRQLLVQAKKTLTEESSFDTDDLPDEIDLASSEYTQSMIFRLRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
REKFLLAKIDKALARIENGTFGICEKCEEEISAKRLEARPVTTLCIRCKEEQEQKEKSFG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKKDLKRFKTMLEESKRQLLVQAKKTLTEESSFDTDDLPDEIDLASSEYTQSMIFRLRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
REKFLLAKIDKALARIENGTFGICEKCEEEISAKRLEARPVTTLCIRCKEEQEQKEKSFG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]