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The map label for this gene is rdxB [H]

Identifier: 220916442

GI number: 220916442

Start: 1486815

End: 1488044

Strand: Direct

Name: rdxB [H]

Synonym: A2cp1_1336

Alternate gene names: 220916442

Gene position: 1486815-1488044 (Clockwise)

Preceding gene: 220916441

Following gene: 220916443

Centisome position: 29.56

GC content: 77.64

Gene sequence:

>1230_bases
ATGACGACGACTAGGCGGTTCCAGAGGTGGCGGCGCATCGCGGGGGCAGCCCAGGCACTCATCGTGCTGGGGCTGCCCTT
CGTCTCCGTCGGCGGCGAGAGCGCGCTGCGCCTCGACGTGCCGGCGGGCCGCCTCCACGCGTTCGGCGCGTCGTACGCGG
TGGACGAGATGTTCGTGGTGCTCGCCGCCACGCTCGCGCTCACCGCCGCGCTCCTGCTCGTGACGCTGCTGTTCGGCCGC
GTGTGGTGCGGCTGGTCCTGCCCGCAGACGCTGCTCGGCGATCTCACCGCCTGGGTGGAGCCGGAGCGCCGCAAGCGCCC
GCGCCGGTGGCGCCGGCCGCTCGGCTTCGCGGCGGTGGCGGTCGTGTCGGCGGTCGCCTCGGCCAACCTGGTCTGGTACT
TCGTGCCGCCCGTCGAGTTCTTCCGGCGGCTCGCGGCGGGGGCCCTCGGCCCGGTGGTGGCCGGCTCGTGGGCGGCCGGC
TTCGCGGTGCTGTTCCTCGACCTGGCCGTGCTGCGCCAGCGCTTCTGCGCCACCGCCTGCCCGTACGCGAAGCTGCAGGG
GGTGCTGTTCGACCGCAGCACGCTGGTGGTCGCGTACGACGCGCGGCGCGCCCAGGACTGCGTGGACTGCGGCGCCTGCG
TGCGGGTGTGCCCCACCGGCATCGACATCCGGCACGGGCTGCAGATGGAGTGCATCGCCTGCGCGGCCTGCATCGACGCC
TGCGAGCCGGTGATGCGCAAGCTGCGCCGCGCGCCGGATCTCATCGGCTACTCCTACGGCGAGCCGGGCGGGCGGCCGCG
CCTGGCGCGCCCCGCCGCGCTGGTGCTCGCCGGCGTCACGGCGGTCACGCTGGCGGTGCTGGTCGCCACCGTCGCCGGCC
GGGCGCCGCTCGGGCTCACCGTGCTCGGCGACGAGGCCTACGCGCCCCGCCGCACGCCCGACGGCCGCGTGCTGAACACG
CTCTCGGTCGGGCTCGAGAACCGCGGCCGGCGGCCGGTGGAGGTGGACCTGGCGCTCGAGCCGGGCGCCGGCGGCGAGGC
CGAGCTCCGCCCGGCGCGCGTCGCGCTCGCGGGCGGCGAGCGCCGCCGGGTCCGCGTGCTCGCCGCCGTGCGCGGGCTGC
CGGAGGGGCGCAGCGCCGCCCGCGTCGTCGCGCGCCCGCGGCCGGACGGCGAGGCGCCCGGCGAGGCCGCCTCCGCCGCC
GTCTCCCTCGTCGCACCGGAGGTGAAGTGA

Upstream 100 bases:

>100_bases
GGCGGCACGATGTGCGTGGCGCTGCTGGGGATCATCGTCTTCTACTACTCGCGCAGGCGGAAGGACCGGGTGGAGGAGGC
GAAGTACAAGATGCTCGAGG

Downstream 100 bases:

>100_bases
AGCCCGTCATCGCCCTCGCCGTCCTGGCCGCGCTCGGCGCGGTGGGCGGCACCATCTGGATCGGCAGCCTGGTCCGCGAG
GACACCGTGGTGGCCCAGCC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTTTRRFQRWRRIAGAAQALIVLGLPFVSVGGESALRLDVPAGRLHAFGASYAVDEMFVVLAATLALTAALLLVTLLFGR
VWCGWSCPQTLLGDLTAWVEPERRKRPRRWRRPLGFAAVAVVSAVASANLVWYFVPPVEFFRRLAAGALGPVVAGSWAAG
FAVLFLDLAVLRQRFCATACPYAKLQGVLFDRSTLVVAYDARRAQDCVDCGACVRVCPTGIDIRHGLQMECIACAACIDA
CEPVMRKLRRAPDLIGYSYGEPGGRPRLARPAALVLAGVTAVTLAVLVATVAGRAPLGLTVLGDEAYAPRRTPDGRVLNT
LSVGLENRGRRPVEVDLALEPGAGGEAELRPARVALAGGERRRVRVLAAVRGLPEGRSAARVVARPRPDGEAPGEAASAA
VSLVAPEVK

Sequences:

>Translated_409_residues
MTTTRRFQRWRRIAGAAQALIVLGLPFVSVGGESALRLDVPAGRLHAFGASYAVDEMFVVLAATLALTAALLLVTLLFGR
VWCGWSCPQTLLGDLTAWVEPERRKRPRRWRRPLGFAAVAVVSAVASANLVWYFVPPVEFFRRLAAGALGPVVAGSWAAG
FAVLFLDLAVLRQRFCATACPYAKLQGVLFDRSTLVVAYDARRAQDCVDCGACVRVCPTGIDIRHGLQMECIACAACIDA
CEPVMRKLRRAPDLIGYSYGEPGGRPRLARPAALVLAGVTAVTLAVLVATVAGRAPLGLTVLGDEAYAPRRTPDGRVLNT
LSVGLENRGRRPVEVDLALEPGAGGEAELRPARVALAGGERRRVRVLAAVRGLPEGRSAARVVARPRPDGEAPGEAASAA
VSLVAPEVK
>Mature_408_residues
TTTRRFQRWRRIAGAAQALIVLGLPFVSVGGESALRLDVPAGRLHAFGASYAVDEMFVVLAATLALTAALLLVTLLFGRV
WCGWSCPQTLLGDLTAWVEPERRKRPRRWRRPLGFAAVAVVSAVASANLVWYFVPPVEFFRRLAAGALGPVVAGSWAAGF
AVLFLDLAVLRQRFCATACPYAKLQGVLFDRSTLVVAYDARRAQDCVDCGACVRVCPTGIDIRHGLQMECIACAACIDAC
EPVMRKLRRAPDLIGYSYGEPGGRPRLARPAALVLAGVTAVTLAVLVATVAGRAPLGLTVLGDEAYAPRRTPDGRVLNTL
SVGLENRGRRPVEVDLALEPGAGGEAELRPARVALAGGERRRVRVLAAVRGLPEGRSAARVVARPRPDGEAPGEAASAAV
SLVAPEVK

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=278, Percent_Identity=25.8992805755396, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788532, Length=201, Percent_Identity=28.8557213930348, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43483; Mature: 43352

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRRFQRWRRIAGAAQALIVLGLPFVSVGGESALRLDVPAGRLHAFGASYAVDEMFVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHH
LAATLALTAALLLVTLLFGRVWCGWSCPQTLLGDLTAWVEPERRKRPRRWRRPLGFAAVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCHHHHCCCHHHHHH
VVSAVASANLVWYFVPPVEFFRRLAAGALGPVVAGSWAAGFAVLFLDLAVLRQRFCATAC
HHHHHHHCCEEEEECCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PYAKLQGVLFDRSTLVVAYDARRAQDCVDCGACVRVCPTGIDIRHGLQMECIACAACIDA
CHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
CEPVMRKLRRAPDLIGYSYGEPGGRPRLARPAALVLAGVTAVTLAVLVATVAGRAPLGLT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VLGDEAYAPRRTPDGRVLNTLSVGLENRGRRPVEVDLALEPGAGGEAELRPARVALAGGE
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
RRRVRVLAAVRGLPEGRSAARVVARPRPDGEAPGEAASAAVSLVAPEVK
CHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTTRRFQRWRRIAGAAQALIVLGLPFVSVGGESALRLDVPAGRLHAFGASYAVDEMFVV
CCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHCCCHHHHHHHHHH
LAATLALTAALLLVTLLFGRVWCGWSCPQTLLGDLTAWVEPERRKRPRRWRRPLGFAAVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCCHHHHCCCHHHHHH
VVSAVASANLVWYFVPPVEFFRRLAAGALGPVVAGSWAAGFAVLFLDLAVLRQRFCATAC
HHHHHHHCCEEEEECCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PYAKLQGVLFDRSTLVVAYDARRAQDCVDCGACVRVCPTGIDIRHGLQMECIACAACIDA
CHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
CEPVMRKLRRAPDLIGYSYGEPGGRPRLARPAALVLAGVTAVTLAVLVATVAGRAPLGLT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VLGDEAYAPRRTPDGRVLNTLSVGLENRGRRPVEVDLALEPGAGGEAELRPARVALAGGE
EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
RRRVRVLAAVRGLPEGRSAARVVARPRPDGEAPGEAASAAVSLVAPEVK
CHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]