| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ytiB [H]
Identifier: 220916360
GI number: 220916360
Start: 1402652
End: 1403194
Strand: Direct
Name: ytiB [H]
Synonym: A2cp1_1254
Alternate gene names: 220916360
Gene position: 1402652-1403194 (Clockwise)
Preceding gene: 220916359
Following gene: 220916361
Centisome position: 27.89
GC content: 73.85
Gene sequence:
>543_bases GTGGCACTGCTCGACGAGATCCTGGAGGACAACCGGAAGGTGGCGGGCCCGGGGAAGGACCCCGGCAGCTACATCGCGCA CCGGCACCTGTGCATCGTCACGTGCGTGGATCCGCGGCTGACGCACTTCTTCGGCAGCGCGCTCGGCGTCGAGCGCGGCC ACGCGGTGGCGCTCCGCGTGCCCGGCGCGCGCATCGCGCCCGGCTCCGAGCTGATGCGCGCGCTGGCCGCGTCCGTGTAC GTGAACGACTGCCAGGAGATCCTGGTCATCCCGCACACCGACTGCGGCGTCGCCAGCGTCGGCGGCACCGAGCTGCGCCG CGTGATGCGCGCCCGCGGCGTGGCCGACGCGGACATCCCGCAGGACCCCGGCGCGTTCTTCGGCCTGGTGCCGGACGTGC GCGAGGGCGCCCGCGAGACGGTGCGCGCCATCCGCGCGTCGCCGTTCCTCCCTCGCCACATCCCCGTGCACGCCGCGCTG ATGGACATCCGCACCGGCGCGCTGGAGGTCATCGAGCGCGGGTACGAGCACGTGTTCGGGTAG
Upstream 100 bases:
>100_bases GACGGGGCGGCCCTTCGCGTTCCGGTGGGTTGTCGCCGGCGGGCAGGCGCTCTAACCTGTCCGGCCCGCCCCGGGCCGGG CGAGGCCAGAGAGGAGCCAC
Downstream 100 bases:
>100_bases GGGGGCGGGCGGCTTTGAAGGAGCAGGGGGCGGGGCTTTGAAGGAGCGGGGGGGCTTTTGAAGGCGCGGGGGTGGTCGGG GGCTTTGAGGAGCGGGGGTG
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MALLDEILEDNRKVAGPGKDPGSYIAHRHLCIVTCVDPRLTHFFGSALGVERGHAVALRVPGARIAPGSELMRALAASVY VNDCQEILVIPHTDCGVASVGGTELRRVMRARGVADADIPQDPGAFFGLVPDVREGARETVRAIRASPFLPRHIPVHAAL MDIRTGALEVIERGYEHVFG
Sequences:
>Translated_180_residues MALLDEILEDNRKVAGPGKDPGSYIAHRHLCIVTCVDPRLTHFFGSALGVERGHAVALRVPGARIAPGSELMRALAASVY VNDCQEILVIPHTDCGVASVGGTELRRVMRARGVADADIPQDPGAFFGLVPDVREGARETVRAIRASPFLPRHIPVHAAL MDIRTGALEVIERGYEHVFG >Mature_179_residues ALLDEILEDNRKVAGPGKDPGSYIAHRHLCIVTCVDPRLTHFFGSALGVERGHAVALRVPGARIAPGSELMRALAASVYV NDCQEILVIPHTDCGVASVGGTELRRVMRARGVADADIPQDPGAFFGLVPDVREGARETVRAIRASPFLPRHIPVHAALM DIRTGALEVIERGYEHVFG
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19375; Mature: 19243
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLDEILEDNRKVAGPGKDPGSYIAHRHLCIVTCVDPRLTHFFGSALGVERGHAVALRV CHHHHHHHHCCCEECCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEC PGARIAPGSELMRALAASVYVNDCQEILVIPHTDCGVASVGGTELRRVMRARGVADADIP CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC QDPGAFFGLVPDVREGARETVRAIRASPFLPRHIPVHAALMDIRTGALEVIERGYEHVFG CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALLDEILEDNRKVAGPGKDPGSYIAHRHLCIVTCVDPRLTHFFGSALGVERGHAVALRV HHHHHHHHCCCEECCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEC PGARIAPGSELMRALAASVYVNDCQEILVIPHTDCGVASVGGTELRRVMRARGVADADIP CCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC QDPGAFFGLVPDVREGARETVRAIRASPFLPRHIPVHAALMDIRTGALEVIERGYEHVFG CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]