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The map label for this gene is omp85 [H]

Identifier: 220916315

GI number: 220916315

Start: 1358413

End: 1360794

Strand: Direct

Name: omp85 [H]

Synonym: A2cp1_1209

Alternate gene names: 220916315

Gene position: 1358413-1360794 (Clockwise)

Preceding gene: 220916314

Following gene: 220916316

Centisome position: 27.01

GC content: 66.37

Gene sequence:

>2382_bases
GTGACGCGCCACCTGCTCAGCGTCCCCGTCCTGCTCGCGGCGCTGCTCCTGGCCGCGGTGCCCGCGCTCGCGCGCGGCGC
CGACCCCGTGCTGTCGGACGTCCGCATCGAGGGCAACCGCCGCGTCGAGGTGGACGCGATCCGCGCGACCATCTCCAGTA
AGAAGGGCGAGCCGCTCGACCCCAAGAAGGTGGACCAGGACCTCCGCGGCATCATGCGCCTGGGCCTGTTCGCGGACGCG
ACCGCCGAGCTGGAGGGGCCGGAGGCCTCGCCCGCCCTGATCTTCAAGGTGGTGGAGCGGCCCACCGTCCACGAGGCGAA
GATCGTCGGGAACGAGGCGCTCTCCAAGGACGACCTCAAGGACACCGTCGAGCTGAAGCCGTACGCGGTGCTCGACCTGG
CCGTCGTCCGCAAGGACGTGAAGAAGATCCAGGAGAAGTACGTCGAGAAGGGGTACTACCTCGCCGACGTGACCTGGAAG
GTCGTGGACCTCCCCGACAACCAGGCGGACGTGATCTACACCGTGGACGAGAAGGCCAAGGTCCAGGTGAAGGAGATCCG
CTTCCTCGGGAACGATCACGTCCCGAAGGACGACATCACCCCGTTCATGCAGACGCAGGAGGGGAACCTCCTGTCGTTCC
TGAACTCCACCGGCACGTACAAGGAGGAGGCGTTCCAGCACGACCTCCAGTCCGTCCAGGCCGTCTACATGGACAAGGGC
TACGTGACGGTGAAGGTCGGGAAGCCGTCCGTCGCGCTCTCGCCGGACCGCCGGTTCCTCTTCATCACCATCCCGGTGGA
GGAGGGCGAGAAGTACGACATCGGCAAGATCGAGTTCAGCGGCCAGCTCCTCGACCGCGAGCCGGTGCTGAAGCGCATGG
TCCGCACCAAGACCGGCGACCTGTTCATGCGCTCGAAGGTGGGCGCCGACATCTTCGCCATCGGCGACCTCTACAAGGAC
ATGGGGTACGCGTACGCGAACGTCACCCCGCTCACCAACACCGATCCGAAGCGCCGCATCGTGGACATCAACTTCGAGGT
GCAGCCCGGCCCGAAGGTCCACTTCGAGCGCATCGAGATCATCGGCAACGACAAGACGCGCGACAAGGTGATCCGCCGCG
AGCTGCGGATCTACGAGGGCGAGCTCTACAGCGGCACCGGGATCAAGGCGTCGAAGCAGCGCATCACCGCGCTGGGCTTC
TTCGAGACGGTCGAGATCACCACCAAGAAGGGCAGCAAGGACGACACCATCGTCGCCACGGTGGAGGTGAAGGAGAAGGC
GACCGGCACGTTCCAGGTGGGCGCCGGCTTCTCGTCCTACGAGAACTTCATCCTCACCGGGCAGATCTCGCAGAACAACT
TCTTCGGCTGGGGCCAGACGCTCTCGCTGCAGGTGCAGTGGTCGTCGATCCGCCAGCTCGGGCAGATCCAGTTCGTCGAG
CCGTACTTCCTCGACACGCGCTGGACCTTCGCCTTCGACCTGTACGCGACCGAGGGCTACTACACGACGTTCACCCGGCG
GGCCATCGGCGGCTCGATGACCTGGGGCTACGAGCTCTCCGGCCTCTACCCGTGGTGGTCGTTCGCGCGGAAGCTCGACG
ACCTGCGCCTGTTCGCCACCTACACGAACGAGTACGTGTCGGTGTCGGCCTCCGACTCCGGCCTGCTCTACGCGAACCAG
TTCAAGTCCGGCACCACCAGCGCGCTGCGCCTCTCGCTCCAGTGGGACAAGCGCGACAACCGCCTGTTCCCGTCGCGTGG
CTGGTTCATCTCCACCAGCGCCGAGGCCGCCCCGCCGCTCCTCGCGCCGCAGTGGGCGTTCGGGCAGAACGTGAACCTGT
TCACCCGGTACGCGGTGGACGCGCGCTGGTACCGGCCGGTGTTCCTCGGCCTCATCGCCCGCGCGAAGCTGACGCTCGGC
TACATCCGCAACTGGGACGCCTCGCACCAGGTGCCCATCTCCGAGCTGTACTACGTGGGCGGCATCAACTCGCTGCGCGG
CTACCGGTACCTCTCCATCGCGCCGGCCGAGGACGTGGGCCGCTCGCGCAACCCGTCGTCCGCGCTCTACCCGCTGGCGG
TCGGCGGCGACAAGCAGCTCGTCCTGAACCTCGAGCTCGAGTTCCCCATCGTCGAGAAGGTGGGCGTGCGCGGGGTGCTG
TTCAGCGACATGGGCAACGCGTTCGCCCGCGGCAAGTACTCCGATCCCGACGTGCCGCTGTCGCTCTACAAGTCGGTCGG
GTTCGGCTTCCGGTGGTTCAGCCCCATCGGCCCGCTCCGCTTCGAGTGGGGCATCCCGCTGAATCGCCGCAAGGACAAGC
TGACCGGCGAATACGTCGATCAGGCGCTCGACTTCCAGTTCACCATCGGCAACTTCTTCTGA

Upstream 100 bases:

>100_bases
GCGCCCCGCGACCCCCGCCCCGCGTCGCGCGGCGACGGGGCAGGCCACGGCGCAAGAGTGTTTGAGGTTTTCCAGGGGCC
GGTTTAGATTCCGCGGCTCC

Downstream 100 bases:

>100_bases
TCCACCGAAGGACCCGCCATGCGCACTCTCGCTCGCCTCTCCCTGCTCGCCCTCCTCCTCTCCGCCACCGCCGCCCGCGC
CGCCGAGGCCAAGTTCGGCT

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 793; Mature: 792

Protein sequence:

>793_residues
MTRHLLSVPVLLAALLLAAVPALARGADPVLSDVRIEGNRRVEVDAIRATISSKKGEPLDPKKVDQDLRGIMRLGLFADA
TAELEGPEASPALIFKVVERPTVHEAKIVGNEALSKDDLKDTVELKPYAVLDLAVVRKDVKKIQEKYVEKGYYLADVTWK
VVDLPDNQADVIYTVDEKAKVQVKEIRFLGNDHVPKDDITPFMQTQEGNLLSFLNSTGTYKEEAFQHDLQSVQAVYMDKG
YVTVKVGKPSVALSPDRRFLFITIPVEEGEKYDIGKIEFSGQLLDREPVLKRMVRTKTGDLFMRSKVGADIFAIGDLYKD
MGYAYANVTPLTNTDPKRRIVDINFEVQPGPKVHFERIEIIGNDKTRDKVIRRELRIYEGELYSGTGIKASKQRITALGF
FETVEITTKKGSKDDTIVATVEVKEKATGTFQVGAGFSSYENFILTGQISQNNFFGWGQTLSLQVQWSSIRQLGQIQFVE
PYFLDTRWTFAFDLYATEGYYTTFTRRAIGGSMTWGYELSGLYPWWSFARKLDDLRLFATYTNEYVSVSASDSGLLYANQ
FKSGTTSALRLSLQWDKRDNRLFPSRGWFISTSAEAAPPLLAPQWAFGQNVNLFTRYAVDARWYRPVFLGLIARAKLTLG
YIRNWDASHQVPISELYYVGGINSLRGYRYLSIAPAEDVGRSRNPSSALYPLAVGGDKQLVLNLELEFPIVEKVGVRGVL
FSDMGNAFARGKYSDPDVPLSLYKSVGFGFRWFSPIGPLRFEWGIPLNRRKDKLTGEYVDQALDFQFTIGNFF

Sequences:

>Translated_793_residues
MTRHLLSVPVLLAALLLAAVPALARGADPVLSDVRIEGNRRVEVDAIRATISSKKGEPLDPKKVDQDLRGIMRLGLFADA
TAELEGPEASPALIFKVVERPTVHEAKIVGNEALSKDDLKDTVELKPYAVLDLAVVRKDVKKIQEKYVEKGYYLADVTWK
VVDLPDNQADVIYTVDEKAKVQVKEIRFLGNDHVPKDDITPFMQTQEGNLLSFLNSTGTYKEEAFQHDLQSVQAVYMDKG
YVTVKVGKPSVALSPDRRFLFITIPVEEGEKYDIGKIEFSGQLLDREPVLKRMVRTKTGDLFMRSKVGADIFAIGDLYKD
MGYAYANVTPLTNTDPKRRIVDINFEVQPGPKVHFERIEIIGNDKTRDKVIRRELRIYEGELYSGTGIKASKQRITALGF
FETVEITTKKGSKDDTIVATVEVKEKATGTFQVGAGFSSYENFILTGQISQNNFFGWGQTLSLQVQWSSIRQLGQIQFVE
PYFLDTRWTFAFDLYATEGYYTTFTRRAIGGSMTWGYELSGLYPWWSFARKLDDLRLFATYTNEYVSVSASDSGLLYANQ
FKSGTTSALRLSLQWDKRDNRLFPSRGWFISTSAEAAPPLLAPQWAFGQNVNLFTRYAVDARWYRPVFLGLIARAKLTLG
YIRNWDASHQVPISELYYVGGINSLRGYRYLSIAPAEDVGRSRNPSSALYPLAVGGDKQLVLNLELEFPIVEKVGVRGVL
FSDMGNAFARGKYSDPDVPLSLYKSVGFGFRWFSPIGPLRFEWGIPLNRRKDKLTGEYVDQALDFQFTIGNFF
>Mature_792_residues
TRHLLSVPVLLAALLLAAVPALARGADPVLSDVRIEGNRRVEVDAIRATISSKKGEPLDPKKVDQDLRGIMRLGLFADAT
AELEGPEASPALIFKVVERPTVHEAKIVGNEALSKDDLKDTVELKPYAVLDLAVVRKDVKKIQEKYVEKGYYLADVTWKV
VDLPDNQADVIYTVDEKAKVQVKEIRFLGNDHVPKDDITPFMQTQEGNLLSFLNSTGTYKEEAFQHDLQSVQAVYMDKGY
VTVKVGKPSVALSPDRRFLFITIPVEEGEKYDIGKIEFSGQLLDREPVLKRMVRTKTGDLFMRSKVGADIFAIGDLYKDM
GYAYANVTPLTNTDPKRRIVDINFEVQPGPKVHFERIEIIGNDKTRDKVIRRELRIYEGELYSGTGIKASKQRITALGFF
ETVEITTKKGSKDDTIVATVEVKEKATGTFQVGAGFSSYENFILTGQISQNNFFGWGQTLSLQVQWSSIRQLGQIQFVEP
YFLDTRWTFAFDLYATEGYYTTFTRRAIGGSMTWGYELSGLYPWWSFARKLDDLRLFATYTNEYVSVSASDSGLLYANQF
KSGTTSALRLSLQWDKRDNRLFPSRGWFISTSAEAAPPLLAPQWAFGQNVNLFTRYAVDARWYRPVFLGLIARAKLTLGY
IRNWDASHQVPISELYYVGGINSLRGYRYLSIAPAEDVGRSRNPSSALYPLAVGGDKQLVLNLELEFPIVEKVGVRGVLF
SDMGNAFARGKYSDPDVPLSLYKSVGFGFRWFSPIGPLRFEWGIPLNRRKDKLTGEYVDQALDFQFTIGNFF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=853, Percent_Identity=24.8534583821805, Blast_Score=240, Evalue=2e-64,
Organism=Drosophila melanogaster, GI45552629, Length=336, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=8e-12,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 89360; Mature: 89229

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHLLSVPVLLAALLLAAVPALARGADPVLSDVRIEGNRRVEVDAIRATISSKKGEPLD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEHHHHHHHCCCCCCCC
PKKVDQDLRGIMRLGLFADATAELEGPEASPALIFKVVERPTVHEAKIVGNEALSKDDLK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEECCHHCCCCCCC
DTVELKPYAVLDLAVVRKDVKKIQEKYVEKGYYLADVTWKVVDLPDNQADVIYTVDEKAK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEECCCCE
VQVKEIRFLGNDHVPKDDITPFMQTQEGNLLSFLNSTGTYKEEAFQHDLQSVQAVYMDKG
EEEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEECCC
YVTVKVGKPSVALSPDRRFLFITIPVEEGEKYDIGKIEFSGQLLDREPVLKRMVRTKTGD
EEEEEECCCCEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCC
LFMRSKVGADIFAIGDLYKDMGYAYANVTPLTNTDPKRRIVDINFEVQPGPKVHFERIEI
EEEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEE
IGNDKTRDKVIRRELRIYEGELYSGTGIKASKQRITALGFFETVEITTKKGSKDDTIVAT
ECCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHEEEEEEEEEEEEEECCCCCCCEEEEE
VEVKEKATGTFQVGAGFSSYENFILTGQISQNNFFGWGQTLSLQVQWSSIRQLGQIQFVE
EEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHHHCCCEEEEC
PYFLDTRWTFAFDLYATEGYYTTFTRRAIGGSMTWGYELSGLYPWWSFARKLDDLRLFAT
CEEECCEEEEEEEEEEECCEEEEEEHHHCCCCCEECEEECCCCHHHHHHHHHCCEEEEEE
YTNEYVSVSASDSGLLYANQFKSGTTSALRLSLQWDKRDNRLFPSRGWFISTSAEAAPPL
ECCCEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCCCCCC
LAPQWAFGQNVNLFTRYAVDARWYRPVFLGLIARAKLTLGYIRNWDASHQVPISELYYVG
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEC
GINSLRGYRYLSIAPAEDVGRSRNPSSALYPLAVGGDKQLVLNLELEFPIVEKVGVRGVL
CCCCCCCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCEEE
FSDMGNAFARGKYSDPDVPLSLYKSVGFGFRWFSPIGPLRFEWGIPLNRRKDKLTGEYVD
EHHCCCHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHH
QALDFQFTIGNFF
HHCCEEEECCCCC
>Mature Secondary Structure 
TRHLLSVPVLLAALLLAAVPALARGADPVLSDVRIEGNRRVEVDAIRATISSKKGEPLD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEHHHHHHHCCCCCCCC
PKKVDQDLRGIMRLGLFADATAELEGPEASPALIFKVVERPTVHEAKIVGNEALSKDDLK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEECCHHCCCCCCC
DTVELKPYAVLDLAVVRKDVKKIQEKYVEKGYYLADVTWKVVDLPDNQADVIYTVDEKAK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEECCCCE
VQVKEIRFLGNDHVPKDDITPFMQTQEGNLLSFLNSTGTYKEEAFQHDLQSVQAVYMDKG
EEEEEEEECCCCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEECCC
YVTVKVGKPSVALSPDRRFLFITIPVEEGEKYDIGKIEFSGQLLDREPVLKRMVRTKTGD
EEEEEECCCCEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCC
LFMRSKVGADIFAIGDLYKDMGYAYANVTPLTNTDPKRRIVDINFEVQPGPKVHFERIEI
EEEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEEE
IGNDKTRDKVIRRELRIYEGELYSGTGIKASKQRITALGFFETVEITTKKGSKDDTIVAT
ECCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHEEEEEEEEEEEEEECCCCCCCEEEEE
VEVKEKATGTFQVGAGFSSYENFILTGQISQNNFFGWGQTLSLQVQWSSIRQLGQIQFVE
EEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHHHCCCEEEEC
PYFLDTRWTFAFDLYATEGYYTTFTRRAIGGSMTWGYELSGLYPWWSFARKLDDLRLFAT
CEEECCEEEEEEEEEEECCEEEEEEHHHCCCCCEECEEECCCCHHHHHHHHHCCEEEEEE
YTNEYVSVSASDSGLLYANQFKSGTTSALRLSLQWDKRDNRLFPSRGWFISTSAEAAPPL
ECCCEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEECCCCCEEEECCCCCCCCC
LAPQWAFGQNVNLFTRYAVDARWYRPVFLGLIARAKLTLGYIRNWDASHQVPISELYYVG
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEC
GINSLRGYRYLSIAPAEDVGRSRNPSSALYPLAVGGDKQLVLNLELEFPIVEKVGVRGVL
CCCCCCCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCEEE
FSDMGNAFARGKYSDPDVPLSLYKSVGFGFRWFSPIGPLRFEWGIPLNRRKDKLTGEYVD
EHHCCCHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHH
QALDFQFTIGNFF
HHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]