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The map label for this gene is ymdB [H]

Identifier: 220916279

GI number: 220916279

Start: 1310593

End: 1311384

Strand: Reverse

Name: ymdB [H]

Synonym: A2cp1_1172

Alternate gene names: 220916279

Gene position: 1311384-1310593 (Counterclockwise)

Preceding gene: 220916280

Following gene: 220916276

Centisome position: 26.07

GC content: 72.1

Gene sequence:

>792_bases
TTGAAAGTCCTGTTCCTCGGAGACGTGTTCGGCAAGCCCGGCCGCCAGGCGATCCAGCGGCTCGTTCCCCGCCTCATCGT
GCGCGAGGCGATCGACCTCGTGGTGGCGAACGCCGAGAACTCGGCGGGCGGCGCGGGCGTGACCCCCGACTCCGCCGACG
AGCTGCTCGCGGCCGAGGTGGACCTGCTCACCAGCGGCAACCACATCTGGTCGAAGCGCGAGATCGTCTCCTACCTCGAG
GCGCCCGGCTCGCGGCTGCTCCGCCCCGCCAACTACCCGCCCGGCTCGCCCGGCCGCGGCCGCGGCATCGCCTCCACCCC
GGACGGCCGGCGGCTCGGCGTCGTGAACGTCGAGGGGCGCGTGTTCATGAAGACGCTCGACGATCCGTTCCGCACGGCGC
TCGCGGAGGTGGAGGCGCTGCGGGCCGAGGGCGTCACCTGCATCCTGGTGGACATGCACTGCGAGGCGACCAGCGAGAAG
AACGCCATGGGCTGGTTCCTCGACGGGAAGGTCTCGGCGGTGCTCGGCACGCACACCCACGTGCAGACCGCCGACGCGCG
GGTCCTCCCCGGCGGCACCGCCTTCGTCACCGACGTCGGCATGTGCGGGCCGTGGGACTCGGTCATCGGCGTGAAGAAGG
AGCTGGTGCTGGAGCGCTTCCTCACCCAGCGCCACGTGGGCTTCGAGCCGGCGCGGCGCGACGTCTACCTGCAGGGCGCG
ATCGTGGACCTCGACGACGCGACCGGCCGGGCGCGGTCGATCGCGCGCGTGCAGGAGAAGCTCGAGGAGTGA

Upstream 100 bases:

>100_bases
GACGCGGTGCTCGACGCGCTGGTGACCGAGGCGCGGACGCTCCGGTTCGAGCGAGAAAGCGGTTGACTGGGCACGCTCCG
CGCGCGAGGGATCCCCGACC

Downstream 100 bases:

>100_bases
CCGCGGCCTCGCGGCGCGCCCCCTACCGCACCTTCACGAGCGCGTAGTTCCGCTTGCCCTTCTGCAGGAGCGCGTAGCCG
CCGGCGAGCAGGTCGCCCGC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKVLFLGDVFGKPGRQAIQRLVPRLIVREAIDLVVANAENSAGGAGVTPDSADELLAAEVDLLTSGNHIWSKREIVSYLE
APGSRLLRPANYPPGSPGRGRGIASTPDGRRLGVVNVEGRVFMKTLDDPFRTALAEVEALRAEGVTCILVDMHCEATSEK
NAMGWFLDGKVSAVLGTHTHVQTADARVLPGGTAFVTDVGMCGPWDSVIGVKKELVLERFLTQRHVGFEPARRDVYLQGA
IVDLDDATGRARSIARVQEKLEE

Sequences:

>Translated_263_residues
MKVLFLGDVFGKPGRQAIQRLVPRLIVREAIDLVVANAENSAGGAGVTPDSADELLAAEVDLLTSGNHIWSKREIVSYLE
APGSRLLRPANYPPGSPGRGRGIASTPDGRRLGVVNVEGRVFMKTLDDPFRTALAEVEALRAEGVTCILVDMHCEATSEK
NAMGWFLDGKVSAVLGTHTHVQTADARVLPGGTAFVTDVGMCGPWDSVIGVKKELVLERFLTQRHVGFEPARRDVYLQGA
IVDLDDATGRARSIARVQEKLEE
>Mature_263_residues
MKVLFLGDVFGKPGRQAIQRLVPRLIVREAIDLVVANAENSAGGAGVTPDSADELLAAEVDLLTSGNHIWSKREIVSYLE
APGSRLLRPANYPPGSPGRGRGIASTPDGRRLGVVNVEGRVFMKTLDDPFRTALAEVEALRAEGVTCILVDMHCEATSEK
NAMGWFLDGKVSAVLGTHTHVQTADARVLPGGTAFVTDVGMCGPWDSVIGVKKELVLERFLTQRHVGFEPARRDVYLQGA
IVDLDDATGRARSIARVQEKLEE

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28350; Mature: 28350

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFLGDVFGKPGRQAIQRLVPRLIVREAIDLVVANAENSAGGAGVTPDSADELLAAEV
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHH
DLLTSGNHIWSKREIVSYLEAPGSRLLRPANYPPGSPGRGRGIASTPDGRRLGVVNVEGR
HHEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCE
VFMKTLDDPFRTALAEVEALRAEGVTCILVDMHCEATSEKNAMGWFLDGKVSAVLGTHTH
EEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCEEEEEECCCCE
VQTADARVLPGGTAFVTDVGMCGPWDSVIGVKKELVLERFLTQRHVGFEPARRDVYLQGA
EECCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
IVDLDDATGRARSIARVQEKLEE
EEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLFLGDVFGKPGRQAIQRLVPRLIVREAIDLVVANAENSAGGAGVTPDSADELLAAEV
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHH
DLLTSGNHIWSKREIVSYLEAPGSRLLRPANYPPGSPGRGRGIASTPDGRRLGVVNVEGR
HHEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCE
VFMKTLDDPFRTALAEVEALRAEGVTCILVDMHCEATSEKNAMGWFLDGKVSAVLGTHTH
EEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCEEEEEECCCCE
VQTADARVLPGGTAFVTDVGMCGPWDSVIGVKKELVLERFLTQRHVGFEPARRDVYLQGA
EECCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
IVDLDDATGRARSIARVQEKLEE
EEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]