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The map label for this gene is ycaC [H]

Identifier: 220916273

GI number: 220916273

Start: 1306401

End: 1306958

Strand: Reverse

Name: ycaC [H]

Synonym: A2cp1_1166

Alternate gene names: 220916273

Gene position: 1306958-1306401 (Counterclockwise)

Preceding gene: 220916274

Following gene: 220916272

Centisome position: 25.99

GC content: 73.3

Gene sequence:

>558_bases
ATGTCACGAACCGTGAAGCTCGACCGCCGCACCGCCGCCGTGCTCCTCGTGGACGTGCAGGAGCGGCTCGCGCCCGCCAT
GCCCGCCGAGGCGCTGGCGCGGGTGATGAAGTACGCGACCGCGCTCGTCGAGGGCGCCAAGGCGCTCGGGGTCCCCGTGC
TCGCGACCGAGCAGTATCCCAGAGGTCTCGGCCCGACCCTCCCCGAGCTCGCCCGCCTGCTCCCCTCCCCCGCGCTCGCC
AAGGTGCACTTCTCCTGCGGCGCCGACCCCGCCTTCGCCGCCGCGCTCGAGGCCACCGGCCGCCGGCAGGTCGTGATCAC
CGGGATGGAGACGCACGTGTGCGTGTTCCAGACCGCCCGCGACCTCGTGCAGATGGGCTACGAGGTGCACGTCTGCGCCG
ACGCCGTGTCGAGCCGGACCGAGGAGCACCGCCGGGTCGGCCTCGAGCTGTGCCGCGAGGCCGGCGCGATCGTCACGACG
GCGGAGACCGCGCTGTTCGACCTCCTCCACCAGGCCGGGACCCCCGAGTTCAAGCAGGTGTCCGCCCTGGTGAAGTGA

Upstream 100 bases:

>100_bases
CGCCGCTCCCCGCGCCCCGCGTGCCGCATGGTGCGCGGGGCGTCGTCGTCTCGCCCTCCGCCGACCCCGCCCGTCGGTCC
CGACCCAGGAGCCCGCCGTC

Downstream 100 bases:

>100_bases
CCCCGCGGCCCCGCCCGCCACCGGGGGAGGCAGGCCCGTCCGTCCCGCCGGATCCCGGTTGACCCAAGGGTTTCGCGGTG
CTACCTAGTCCGTCCCCGCA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSRTVKLDRRTAAVLLVDVQERLAPAMPAEALARVMKYATALVEGAKALGVPVLATEQYPRGLGPTLPELARLLPSPALA
KVHFSCGADPAFAAALEATGRRQVVITGMETHVCVFQTARDLVQMGYEVHVCADAVSSRTEEHRRVGLELCREAGAIVTT
AETALFDLLHQAGTPEFKQVSALVK

Sequences:

>Translated_185_residues
MSRTVKLDRRTAAVLLVDVQERLAPAMPAEALARVMKYATALVEGAKALGVPVLATEQYPRGLGPTLPELARLLPSPALA
KVHFSCGADPAFAAALEATGRRQVVITGMETHVCVFQTARDLVQMGYEVHVCADAVSSRTEEHRRVGLELCREAGAIVTT
AETALFDLLHQAGTPEFKQVSALVK
>Mature_184_residues
SRTVKLDRRTAAVLLVDVQERLAPAMPAEALARVMKYATALVEGAKALGVPVLATEQYPRGLGPTLPELARLLPSPALAK
VHFSCGADPAFAAALEATGRRQVVITGMETHVCVFQTARDLVQMGYEVHVCADAVSSRTEEHRRVGLELCREAGAIVTTA
ETALFDLLHQAGTPEFKQVSALVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=168, Percent_Identity=42.2619047619048, Blast_Score=124, Evalue=3e-29,
Organism=Homo sapiens, GI209969695, Length=176, Percent_Identity=36.3636363636364, Blast_Score=106, Evalue=1e-23,
Organism=Homo sapiens, GI13376007, Length=192, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-20,
Organism=Escherichia coli, GI1787124, Length=159, Percent_Identity=32.0754716981132, Blast_Score=73, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17540156, Length=183, Percent_Identity=34.4262295081967, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19922924, Length=186, Percent_Identity=34.9462365591398, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21357489, Length=173, Percent_Identity=37.5722543352601, Blast_Score=114, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19815; Mature: 19684

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTVKLDRRTAAVLLVDVQERLAPAMPAEALARVMKYATALVEGAKALGVPVLATEQYP
CCCCEEECCHHHHHHEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
RGLGPTLPELARLLPSPALAKVHFSCGADPAFAAALEATGRRQVVITGMETHVCVFQTAR
CCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
DLVQMGYEVHVCADAVSSRTEEHRRVGLELCREAGAIVTTAETALFDLLHQAGTPEFKQV
HHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHH
SALVK
HHHCC
>Mature Secondary Structure 
SRTVKLDRRTAAVLLVDVQERLAPAMPAEALARVMKYATALVEGAKALGVPVLATEQYP
CCCEEECCHHHHHHEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
RGLGPTLPELARLLPSPALAKVHFSCGADPAFAAALEATGRRQVVITGMETHVCVFQTAR
CCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
DLVQMGYEVHVCADAVSSRTEEHRRVGLELCREAGAIVTTAETALFDLLHQAGTPEFKQV
HHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHH
SALVK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]