| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916223
Identifier: 220916223
GI number: 220916223
Start: 1250150
End: 1251190
Strand: Direct
Name: 220916223
Synonym: A2cp1_1116
Alternate gene names: NA
Gene position: 1250150-1251190 (Clockwise)
Preceding gene: 220916222
Following gene: 220916232
Centisome position: 24.86
GC content: 62.34
Gene sequence:
>1041_bases GTGTCATTCGCATCTGAGGTACTGACGTACCAGGACGCGCTCGCAACCCTGGGGGATCGTCGGAAGCACGTCCTGCTCGG GAACGGGTTCAGCATCGCGTGCGACCCGGTCTTCAAGTACGGACGGCTCTACGACGCCGCCGTTTCGGCAGGGCTCAGTC CTCGAGCGCAGAACGTCTTCGACTATCTCGGTACCAGCAACTTCGAGGGGGTGATGAGACTCCTCGACGATGCTCACTGG GTCGCCGAGACGTACGAGCTCGTGAGAGGGCGCTCTCAGATGCTCGACGACGTCGATATCGTGAAGAAAACGCTCGTCGA TGCAATCGCGAACTCACACCTGGAGCACACCGGGAAGGTGCCCGACGAGAAGAAGGCGGCCGCACTCGAGTTCCTGAGTC CGTACTACAACGTGTTTACGACCAACTACGACCTGCTCGTGTACTGGGTGAACATGCACAGGCGCGAGGGGCCGATCTGG GGTGACGGGTTCCGCGAAGACGAAGACGAACCCGACTCGCTGTACGTCGTCTTTTCGGAGCGTCTGGGCGGGCAGCGCGG GATGTTCTACCTGCACGGCGCGCTGCACCTGTACACAGCGGGCGGCGAGCTTCGGAAACACACCTGGAAACGTACCGGAA CTCCGCTTACGCATCTCATCAAGGCCGGGCTTGCGAACAAGGAGTACCCGATGTTCGTGGCCGAAGGCTCCGCGAAGAAG AAGCTCGAGCAGATCCAGAGGAACGGGTATCTCTGGTACGCGCTCGACAAGCTCGCGCGGATCGAGGGCCCGCTCGTGGT GTTCGGGCTTTCACTCGGCGACTCGGACTCGCACATCACGCAAGCGCTCGCCGACAACGTGAACATGCCGGCGATCCTCG TCGGGCTGCACGGGGACCCCAAGAGCGCGGTGAACCAGGCAATCCACGCCTCCGTGGCGAAGATGATGGCGCGCAGGCAG GACCTAGTGAAGCGCCGGCACCGCGGGAAAACCCTTGAGGTCGTGTACTACGACAGCGCGACCGCGAAGGCATGGGGCTA A
Upstream 100 bases:
>100_bases GCACGCGACAAGTTGTGCACGTCTGCAGCGGACATATTTGGGCATTCGCACCGGTTCCACTTTCGTGGTCAGTTGACCCA AAGGAAACCAAGGTGACAAC
Downstream 100 bases:
>100_bases GCATCGACGGGCGAGTGTCAGCGCTCACACTGGCGGTTGCTCTAGGCCCCCGAACTCGCCGCCGGTGATGTCAAGCCTCG TTCATCCGACTGTAGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSFASEVLTYQDALATLGDRRKHVLLGNGFSIACDPVFKYGRLYDAAVSAGLSPRAQNVFDYLGTSNFEGVMRLLDDAHW VAETYELVRGRSQMLDDVDIVKKTLVDAIANSHLEHTGKVPDEKKAAALEFLSPYYNVFTTNYDLLVYWVNMHRREGPIW GDGFREDEDEPDSLYVVFSERLGGQRGMFYLHGALHLYTAGGELRKHTWKRTGTPLTHLIKAGLANKEYPMFVAEGSAKK KLEQIQRNGYLWYALDKLARIEGPLVVFGLSLGDSDSHITQALADNVNMPAILVGLHGDPKSAVNQAIHASVAKMMARRQ DLVKRRHRGKTLEVVYYDSATAKAWG
Sequences:
>Translated_346_residues MSFASEVLTYQDALATLGDRRKHVLLGNGFSIACDPVFKYGRLYDAAVSAGLSPRAQNVFDYLGTSNFEGVMRLLDDAHW VAETYELVRGRSQMLDDVDIVKKTLVDAIANSHLEHTGKVPDEKKAAALEFLSPYYNVFTTNYDLLVYWVNMHRREGPIW GDGFREDEDEPDSLYVVFSERLGGQRGMFYLHGALHLYTAGGELRKHTWKRTGTPLTHLIKAGLANKEYPMFVAEGSAKK KLEQIQRNGYLWYALDKLARIEGPLVVFGLSLGDSDSHITQALADNVNMPAILVGLHGDPKSAVNQAIHASVAKMMARRQ DLVKRRHRGKTLEVVYYDSATAKAWG >Mature_345_residues SFASEVLTYQDALATLGDRRKHVLLGNGFSIACDPVFKYGRLYDAAVSAGLSPRAQNVFDYLGTSNFEGVMRLLDDAHWV AETYELVRGRSQMLDDVDIVKKTLVDAIANSHLEHTGKVPDEKKAAALEFLSPYYNVFTTNYDLLVYWVNMHRREGPIWG DGFREDEDEPDSLYVVFSERLGGQRGMFYLHGALHLYTAGGELRKHTWKRTGTPLTHLIKAGLANKEYPMFVAEGSAKKK LEQIQRNGYLWYALDKLARIEGPLVVFGLSLGDSDSHITQALADNVNMPAILVGLHGDPKSAVNQAIHASVAKMMARRQD LVKRRHRGKTLEVVYYDSATAKAWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38741; Mature: 38609
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFASEVLTYQDALATLGDRRKHVLLGNGFSIACDPVFKYGRLYDAAVSAGLSPRAQNVF CCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH DYLGTSNFEGVMRLLDDAHWVAETYELVRGRSQMLDDVDIVKKTLVDAIANSHLEHTGKV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDEKKAAALEFLSPYYNVFTTNYDLLVYWVNMHRREGPIWGDGFREDEDEPDSLYVVFSE CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEEEEEEH RLGGQRGMFYLHGALHLYTAGGELRKHTWKRTGTPLTHLIKAGLANKEYPMFVAEGSAKK HCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCHHH KLEQIQRNGYLWYALDKLARIEGPLVVFGLSLGDSDSHITQALADNVNMPAILVGLHGDP HHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCC KSAVNQAIHASVAKMMARRQDLVKRRHRGKTLEVVYYDSATAKAWG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC >Mature Secondary Structure SFASEVLTYQDALATLGDRRKHVLLGNGFSIACDPVFKYGRLYDAAVSAGLSPRAQNVF CHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHH DYLGTSNFEGVMRLLDDAHWVAETYELVRGRSQMLDDVDIVKKTLVDAIANSHLEHTGKV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDEKKAAALEFLSPYYNVFTTNYDLLVYWVNMHRREGPIWGDGFREDEDEPDSLYVVFSE CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEEEEEEH RLGGQRGMFYLHGALHLYTAGGELRKHTWKRTGTPLTHLIKAGLANKEYPMFVAEGSAKK HCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCHHH KLEQIQRNGYLWYALDKLARIEGPLVVFGLSLGDSDSHITQALADNVNMPAILVGLHGDP HHHHHHHCCEEEEEHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCC KSAVNQAIHASVAKMMARRQDLVKRRHRGKTLEVVYYDSATAKAWG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA