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The map label for this gene is 220916216

Identifier: 220916216

GI number: 220916216

Start: 1238780

End: 1240012

Strand: Reverse

Name: 220916216

Synonym: A2cp1_1107

Alternate gene names: NA

Gene position: 1240012-1238780 (Counterclockwise)

Preceding gene: 220916217

Following gene: 220916215

Centisome position: 24.66

GC content: 62.45

Gene sequence:

>1233_bases
ATGATCTCGTCACAGAAGCTCGGAGAACGGATCGCGTTCGCGAGAAAGAACGCTAACCTCACCCAGGCGGACCTTGCCGC
TAAGATCGGAGTCGCTCGTACGACGCTCGTCGCAGTGGAGAAGGGCGAGCGGCGACCGTCGAACGCAGAACTGATCAAGC
TCGCCGGCTTTCTGAAGGTCTCTGTTCACGATCTGCTTCGCGAACACGCAGTGACCGGCGAAGTGTCACCGCGGTTCCGC
ATGACGGCGCCACCAGGGAACGCCACTGAGGCCAACGCCGTCGTGAAGAGGCTTCAGTCGCTCGGCTCGAGATACGCAGA
GTTGGAGCAACTGCTCGGGCTTCGTCGGATTCCGGCGCCGCTGGAGTCGATCGAGGCCTATCGAGCCGATCGGGCCGGAG
CTGGCTGGGTTTCCGGCGCACCCAACGCGATGAGACTCCTGGGCCAAGATGCGGCACGCACGGTGCGAAACGCGCTTGAT
GTTGGAGACGGTCCGGCGCTCTCGCTTGAGCAGCAGCTCGAGCTTCAGGCGGGTTTGAGGATCTTCCATCTTCCGATGCC
TAACGCGATCGCAGCCATGCTCATCTGGAGCGATGAGCTCGGAGCGTGCGTTGCGATCAACAGGGGGCACCCCCTCGAAC
GACGACGGTGGTCCCTGAGTCACGAGACCGCACACTTCCTACGAGACCGCGAAGAGGGAGAGGTCCTGCCACTGCATTTG
GCGCGGCGCACGGATCCTGCTGAGGTGTTCGCAGAGTCGTTCGCCCAAGAGTTCCTAATGCCCTCCGGAGCGATCGCGCG
CCGGTTCTCCGAACGCGTGCGAGCGAACGGACGGTTCACGATCGCGGACATCCTCTGGATGGCTCACCTGTACCAGGTGT
CGTTCCAGGCGATGACCCTGCGACTCGAGGATCTCGAACTCCTTCCCAGTGGAACCTACGAAGGGCTCGCGGAGAAGAAG
TTCAAGGCATCGGAAGCTGCCGAGAGCCTGGGGTTGCAGTCGATCACCCAGCCACGTCCCGAACTGCTCCCTGACAGGTT
CATAAGCTTGGCGGCTCAAGCCTACGAGAAGGAACTCATCTCCGAGACTGAGTTCGCTTCGTACCTAGAGGTCGATCGCG
TGACTGCCCGGCGCGTCTACCAGAGCCGCCGCCAGTCCCAGGTTGAGGACGGAATGGTCGTCGAACTGGATCTCGGGCGC
GAGTTCGTCACCCAGGCGGGCCACGAACCGTGA

Upstream 100 bases:

>100_bases
ATCGCATCCGCGACCTGTTCGGGCGGCATCGCGCGGAACTCGACAGCTTCTATGCCGCTCGCAGGCCGCGCCCCAAGATT
GCCAGCTCCGAGGAACGCGT

Downstream 100 bases:

>100_bases
ACCCGGGCGACGCGATCATCGACGCCTGTAGCCTGCTGAACCTCTTCGCCACGCGGCGGGAACAGGATCTCATCCGCGCC
CTACAGGTGCGCCTTGTGGT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Conserved Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Adenine Deaminase

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MISSQKLGERIAFARKNANLTQADLAAKIGVARTTLVAVEKGERRPSNAELIKLAGFLKVSVHDLLREHAVTGEVSPRFR
MTAPPGNATEANAVVKRLQSLGSRYAELEQLLGLRRIPAPLESIEAYRADRAGAGWVSGAPNAMRLLGQDAARTVRNALD
VGDGPALSLEQQLELQAGLRIFHLPMPNAIAAMLIWSDELGACVAINRGHPLERRRWSLSHETAHFLRDREEGEVLPLHL
ARRTDPAEVFAESFAQEFLMPSGAIARRFSERVRANGRFTIADILWMAHLYQVSFQAMTLRLEDLELLPSGTYEGLAEKK
FKASEAAESLGLQSITQPRPELLPDRFISLAAQAYEKELISETEFASYLEVDRVTARRVYQSRRQSQVEDGMVVELDLGR
EFVTQAGHEP

Sequences:

>Translated_410_residues
MISSQKLGERIAFARKNANLTQADLAAKIGVARTTLVAVEKGERRPSNAELIKLAGFLKVSVHDLLREHAVTGEVSPRFR
MTAPPGNATEANAVVKRLQSLGSRYAELEQLLGLRRIPAPLESIEAYRADRAGAGWVSGAPNAMRLLGQDAARTVRNALD
VGDGPALSLEQQLELQAGLRIFHLPMPNAIAAMLIWSDELGACVAINRGHPLERRRWSLSHETAHFLRDREEGEVLPLHL
ARRTDPAEVFAESFAQEFLMPSGAIARRFSERVRANGRFTIADILWMAHLYQVSFQAMTLRLEDLELLPSGTYEGLAEKK
FKASEAAESLGLQSITQPRPELLPDRFISLAAQAYEKELISETEFASYLEVDRVTARRVYQSRRQSQVEDGMVVELDLGR
EFVTQAGHEP
>Mature_410_residues
MISSQKLGERIAFARKNANLTQADLAAKIGVARTTLVAVEKGERRPSNAELIKLAGFLKVSVHDLLREHAVTGEVSPRFR
MTAPPGNATEANAVVKRLQSLGSRYAELEQLLGLRRIPAPLESIEAYRADRAGAGWVSGAPNAMRLLGQDAARTVRNALD
VGDGPALSLEQQLELQAGLRIFHLPMPNAIAAMLIWSDELGACVAINRGHPLERRRWSLSHETAHFLRDREEGEVLPLHL
ARRTDPAEVFAESFAQEFLMPSGAIARRFSERVRANGRFTIADILWMAHLYQVSFQAMTLRLEDLELLPSGTYEGLAEKK
FKASEAAESLGLQSITQPRPELLPDRFISLAAQAYEKELISETEFASYLEVDRVTARRVYQSRRQSQVEDGMVVELDLGR
EFVTQAGHEP

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45508; Mature: 45508

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSQKLGERIAFARKNANLTQADLAAKIGVARTTLVAVEKGERRPSNAELIKLAGFLKV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHH
SVHDLLREHAVTGEVSPRFRMTAPPGNATEANAVVKRLQSLGSRYAELEQLLGLRRIPAP
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LESIEAYRADRAGAGWVSGAPNAMRLLGQDAARTVRNALDVGDGPALSLEQQLELQAGLR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCE
IFHLPMPNAIAAMLIWSDELGACVAINRGHPLERRRWSLSHETAHFLRDREEGEVLPLHL
EEECCCCHHHHHHHEECCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEH
ARRTDPAEVFAESFAQEFLMPSGAIARRFSERVRANGRFTIADILWMAHLYQVSFQAMTL
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
RLEDLELLPSGTYEGLAEKKFKASEAAESLGLQSITQPRPELLPDRFISLAAQAYEKELI
EHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SETEFASYLEVDRVTARRVYQSRRQSQVEDGMVVELDLGREFVTQAGHEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCC
>Mature Secondary Structure
MISSQKLGERIAFARKNANLTQADLAAKIGVARTTLVAVEKGERRPSNAELIKLAGFLKV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHH
SVHDLLREHAVTGEVSPRFRMTAPPGNATEANAVVKRLQSLGSRYAELEQLLGLRRIPAP
HHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LESIEAYRADRAGAGWVSGAPNAMRLLGQDAARTVRNALDVGDGPALSLEQQLELQAGLR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCE
IFHLPMPNAIAAMLIWSDELGACVAINRGHPLERRRWSLSHETAHFLRDREEGEVLPLHL
EEECCCCHHHHHHHEECCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEH
ARRTDPAEVFAESFAQEFLMPSGAIARRFSERVRANGRFTIADILWMAHLYQVSFQAMTL
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE
RLEDLELLPSGTYEGLAEKKFKASEAAESLGLQSITQPRPELLPDRFISLAAQAYEKELI
EHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SETEFASYLEVDRVTARRVYQSRRQSQVEDGMVVELDLGREFVTQAGHEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA