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The map label for this gene is intA [C]

Identifier: 220916211

GI number: 220916211

Start: 1229179

End: 1230579

Strand: Direct

Name: intA [C]

Synonym: A2cp1_1101

Alternate gene names: 220916211

Gene position: 1229179-1230579 (Clockwise)

Preceding gene: 220916207

Following gene: 220916212

Centisome position: 24.44

GC content: 69.81

Gene sequence:

>1401_bases
ATGAAGCACGTGGATCTGTCGAGCGAGTGGCTGGCGAACTGGAATCCGCGGCGGCGCGAGGAGGTGACGGACCGTCGGTG
CCGCGGGCTCGTGGTCCGCGCCGGTCCGAGCGGCGCCAAGACGTTCTACCGCTTCACCGACGTTCGTGACCCGGACACGG
GCAAGGCGAAGCGCAAGCGCATCGCCCTCGGCAGGTGGTCGGTGGACGGCGGGCGGGGCACGCTGACTCTGAGCGCTGCG
CGCGATGCGTTCCTGAAGGCCCAGGAGGAGAAGCGCGGCGAGGTGGACGGCACCGCAGAGCGGACCGTCGCGCAGATCGC
GCAGCAGTACCGGACTGACATTCTCTCCCACCGCGAGCGCGCGGACGAGGCGTGGAACGTGATCCGCGTGCACGTCGTGG
AGGCGCAGCCCGATCCCAAACGGTTGTCGTTCGGGGAGTGGGTCGCCCGTCAGGTGAAGGCGTCCGATGTGGCGACGGTG
GTGCGGCACGCGAAGCGCCAGCGGATGGTCCCCGCTACCACGCGCAAAGGAGAGATGATGACCCGGCGCATCGGCGGCGC
GGGCGCCGCGCGTGTTGTGCTGCGCGAGTTGAAATCGATCTTCGCCCACGCGGTCGAGACGGGGGATCTCGACGCCTCGC
CCGCCGTCGTCGCCAAAACCCGGACGTTCGGCATCCGCGCCACCTCGCGCAGCCGTTACTTGAAGGCAGGGGAGGTGAAG
GCGTTCTTCGACGCGCTCGAACTGACGGCGCTGCTCGACGGCACAGCGAAGCGGCAGCGGCTCTCGCCGACGATGCGGCT
GGCGCTCGCGTTCCAACTCTACGTGCCGCTCCGGTCACAGTCTCTCATCGGCGCGCAGTGGATCGAGATCGATCTCGACG
CGAAGCGGTGGACGGTGCCGCCCGTGGCGGGCCGACTGAAGATGCGGAAGGAGGAGCGGGAGGAGGCGGAGGGCTTCGTG
GTGCCGCTCCCGTCGACCGCGGTGGCGATGCTAAAGCGGCTGCGCGAGGAGGCGGGCGATAGCCCGTGGGTCCTGGCGAG
CCCGCTCGATCGCAAGCGCCACATCGAGGCCAAGGCGGTCGTCCGCGCCTTGAGCCGCCTCCAGACGGGCGATCGGCTCG
CGCTCGGCTCTCGAGTCACAGTTCATGATCTTCGCCGCACCTGGCGCACGTTCGCGATGGACCTTGGCGTCGACAACGTG
ACCGCGGAGCGATCGTTGGGCCACGTTGCCGTGCTGCGCGCGTCGGGGTTCGGCGGTGCTGCCGACGTATACGGGCGCGC
TCAGATGGTCGAGCAGCGTGCGGCAGCGGCGGAGCTTGTGGCCGCCGCGTTCGATCGCATCCGGCTCGGCAAGGACGCCA
CTGTGGTGCCGCTGACCGAGCGGGGCGTGATGCCCGCCTGA

Upstream 100 bases:

>100_bases
GCGTGATACACGAAAAGCGCACCCCGGGCGCACCCCGCACCCCAAACGCACCCCGGGTCGGCGGTGGAAGTGGTCGCTCC
GAACGCGAAAGTGGTCGCCC

Downstream 100 bases:

>100_bases
CCGCTGCTGCCGGCGCGTCCACCGCGAGGAGCGCCGTAGACAGCGCCGCTGCGAGAGGAGCGCGCCCGCCGCACAGCCCT
TCGCGACCGATGCGACTCGG

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Prophage Integrase; Phage-Related Integrase; Symbiosis Island Integrase; Prophage INTEGRASE PROTEIN; Prophage CPS-53 Integrase; Integrase I; Integrase Or Site-Specific Recombinase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKHVDLSSEWLANWNPRRREEVTDRRCRGLVVRAGPSGAKTFYRFTDVRDPDTGKAKRKRIALGRWSVDGGRGTLTLSAA
RDAFLKAQEEKRGEVDGTAERTVAQIAQQYRTDILSHRERADEAWNVIRVHVVEAQPDPKRLSFGEWVARQVKASDVATV
VRHAKRQRMVPATTRKGEMMTRRIGGAGAARVVLRELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEVK
AFFDALELTALLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVPPVAGRLKMRKEEREEAEGFV
VPLPSTAVAMLKRLREEAGDSPWVLASPLDRKRHIEAKAVVRALSRLQTGDRLALGSRVTVHDLRRTWRTFAMDLGVDNV
TAERSLGHVAVLRASGFGGAADVYGRAQMVEQRAAAAELVAAAFDRIRLGKDATVVPLTERGVMPA

Sequences:

>Translated_466_residues
MKHVDLSSEWLANWNPRRREEVTDRRCRGLVVRAGPSGAKTFYRFTDVRDPDTGKAKRKRIALGRWSVDGGRGTLTLSAA
RDAFLKAQEEKRGEVDGTAERTVAQIAQQYRTDILSHRERADEAWNVIRVHVVEAQPDPKRLSFGEWVARQVKASDVATV
VRHAKRQRMVPATTRKGEMMTRRIGGAGAARVVLRELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEVK
AFFDALELTALLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVPPVAGRLKMRKEEREEAEGFV
VPLPSTAVAMLKRLREEAGDSPWVLASPLDRKRHIEAKAVVRALSRLQTGDRLALGSRVTVHDLRRTWRTFAMDLGVDNV
TAERSLGHVAVLRASGFGGAADVYGRAQMVEQRAAAAELVAAAFDRIRLGKDATVVPLTERGVMPA
>Mature_466_residues
MKHVDLSSEWLANWNPRRREEVTDRRCRGLVVRAGPSGAKTFYRFTDVRDPDTGKAKRKRIALGRWSVDGGRGTLTLSAA
RDAFLKAQEEKRGEVDGTAERTVAQIAQQYRTDILSHRERADEAWNVIRVHVVEAQPDPKRLSFGEWVARQVKASDVATV
VRHAKRQRMVPATTRKGEMMTRRIGGAGAARVVLRELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEVK
AFFDALELTALLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVPPVAGRLKMRKEEREEAEGFV
VPLPSTAVAMLKRLREEAGDSPWVLASPLDRKRHIEAKAVVRALSRLQTGDRLALGSRVTVHDLRRTWRTFAMDLGVDNV
TAERSLGHVAVLRASGFGGAADVYGRAQMVEQRAAAAELVAAAFDRIRLGKDATVVPLTERGVMPA

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51746; Mature: 51746

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVDLSSEWLANWNPRRREEVTDRRCRGLVVRAGPSGAKTFYRFTDVRDPDTGKAKRKR
CCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHH
IALGRWSVDGGRGTLTLSAARDAFLKAQEEKRGEVDGTAERTVAQIAQQYRTDILSHRER
EEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADEAWNVIRVHVVEAQPDPKRLSFGEWVARQVKASDVATVVRHAKRQRMVPATTRKGEMM
HHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
TRRIGGAGAARVVLRELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEVK
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHCCCCCHHH
AFFDALELTALLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVP
HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEECC
PVAGRLKMRKEEREEAEGFVVPLPSTAVAMLKRLREEAGDSPWVLASPLDRKRHIEAKAV
CHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH
VRALSRLQTGDRLALGSRVTVHDLRRTWRTFAMDLGVDNVTAERSLGHVAVLRASGFGGA
HHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCH
ADVYGRAQMVEQRAAAAELVAAAFDRIRLGKDATVVPLTERGVMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKHVDLSSEWLANWNPRRREEVTDRRCRGLVVRAGPSGAKTFYRFTDVRDPDTGKAKRKR
CCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHH
IALGRWSVDGGRGTLTLSAARDAFLKAQEEKRGEVDGTAERTVAQIAQQYRTDILSHRER
EEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADEAWNVIRVHVVEAQPDPKRLSFGEWVARQVKASDVATVVRHAKRQRMVPATTRKGEMM
HHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
TRRIGGAGAARVVLRELKSIFAHAVETGDLDASPAVVAKTRTFGIRATSRSRYLKAGEVK
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHCCCCCHHH
AFFDALELTALLDGTAKRQRLSPTMRLALAFQLYVPLRSQSLIGAQWIEIDLDAKRWTVP
HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCEECC
PVAGRLKMRKEEREEAEGFVVPLPSTAVAMLKRLREEAGDSPWVLASPLDRKRHIEAKAV
CHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH
VRALSRLQTGDRLALGSRVTVHDLRRTWRTFAMDLGVDNVTAERSLGHVAVLRASGFGGA
HHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCH
ADVYGRAQMVEQRAAAAELVAAAFDRIRLGKDATVVPLTERGVMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA