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The map label for this gene is 220916204

Identifier: 220916204

GI number: 220916204

Start: 1222168

End: 1222764

Strand: Direct

Name: 220916204

Synonym: A2cp1_1093

Alternate gene names: NA

Gene position: 1222168-1222764 (Clockwise)

Preceding gene: 220916203

Following gene: 220916206

Centisome position: 24.3

GC content: 77.72

Gene sequence:

>597_bases
ATGCGGCGCGTCCCCTGGGTCACCGTCGCGGTGCTCGCGGTTGCCCTCGGCGCGTATCTCGTGCCGGCGCTGGGCGAGCT
GCTGATCCTCGACCGCGCGCGCGTCGAGGGCGGCGAGGGCTGGCGCGTGCTCACGGGGAGCCTCGTGCACTTCTCCGCGT
CGCACCTCGCGGCCGACGCCCTCGCGTTCGGCGTCGCCGGCGCGATGCTGGAGCGCCGCGGCCGCGCGAGGTTCGCGGTC
CTGGCGCTCGCGTCGGCGCTCGCCGTCGGCCTCGCGGTGCTCTGGCTCGAGCCCACGCTCCAGCGCTTCGCCGGGCTCTC
CGGGGTGGCGTACGCGGCGATCGTTGCGCTCGCGCTCGTGGGGCTGCGCGAGGGCGGAGCGATGGCGACGCTCTCCGGCG
TCGCGCTCGCGGCGTGCGTCGCGAAGCTGGCATGGGAGCTCTCCACCGGGCGGATGCTCCTCGTCGGCGCGCCGCCGGGC
ATCGTCGCGGTCCCGCTCGCCCATCTCGCAGGCGCGATCGCGGCGGTCGCCGTCACCGGGACCGGGCGACGCCCCGGCGC
GGCGCGCCCCGTCGCAGGGAGTCCAGCAGCGCGGTGA

Upstream 100 bases:

>100_bases
GCGGCGGCGCCATCGACCCGGCGACGCTCGCCATCCTCGCGGCGCTCGCGGGCGGCGCCATGGCCGGCTCGCTGCGGTGG
AGGCGCTCGGGGACGCGGTG

Downstream 100 bases:

>100_bases
GCTCCGGGCTCGCGCGCTCGCCCCGCCACAGCAGCGCCACGCGGTGCGTGAGCGCGGGCTCCCGCAGCGGGAGGAAGCGC
GTGTTCGACGCCCGCGTCCG

Product: Rhomboid family protein

Products: NA

Alternate protein names: Rhomboid-Like Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRVPWVTVAVLAVALGAYLVPALGELLILDRARVEGGEGWRVLTGSLVHFSASHLAADALAFGVAGAMLERRGRARFAV
LALASALAVGLAVLWLEPTLQRFAGLSGVAYAAIVALALVGLREGGAMATLSGVALAACVAKLAWELSTGRMLLVGAPPG
IVAVPLAHLAGAIAAVAVTGTGRRPGAARPVAGSPAAR

Sequences:

>Translated_198_residues
MRRVPWVTVAVLAVALGAYLVPALGELLILDRARVEGGEGWRVLTGSLVHFSASHLAADALAFGVAGAMLERRGRARFAV
LALASALAVGLAVLWLEPTLQRFAGLSGVAYAAIVALALVGLREGGAMATLSGVALAACVAKLAWELSTGRMLLVGAPPG
IVAVPLAHLAGAIAAVAVTGTGRRPGAARPVAGSPAAR
>Mature_198_residues
MRRVPWVTVAVLAVALGAYLVPALGELLILDRARVEGGEGWRVLTGSLVHFSASHLAADALAFGVAGAMLERRGRARFAV
LALASALAVGLAVLWLEPTLQRFAGLSGVAYAAIVALALVGLREGGAMATLSGVALAACVAKLAWELSTGRMLLVGAPPG
IVAVPLAHLAGAIAAVAVTGTGRRPGAARPVAGSPAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19864; Mature: 19864

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: PS00358 RIBOSOMAL_L5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVPWVTVAVLAVALGAYLVPALGELLILDRARVEGGEGWRVLTGSLVHFSASHLAADA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHH
LAFGVAGAMLERRGRARFAVLALASALAVGLAVLWLEPTLQRFAGLSGVAYAAIVALALV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLREGGAMATLSGVALAACVAKLAWELSTGRMLLVGAPPGIVAVPLAHLAGAIAAVAVTG
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEC
TGRRPGAARPVAGSPAAR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRVPWVTVAVLAVALGAYLVPALGELLILDRARVEGGEGWRVLTGSLVHFSASHLAADA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHH
LAFGVAGAMLERRGRARFAVLALASALAVGLAVLWLEPTLQRFAGLSGVAYAAIVALALV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLREGGAMATLSGVALAACVAKLAWELSTGRMLLVGAPPGIVAVPLAHLAGAIAAVAVTG
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEC
TGRRPGAARPVAGSPAAR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA