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The map label for this gene is yraQ [C]

Identifier: 220916200

GI number: 220916200

Start: 1218986

End: 1220086

Strand: Direct

Name: yraQ [C]

Synonym: A2cp1_1089

Alternate gene names: 220916200

Gene position: 1218986-1220086 (Clockwise)

Preceding gene: 220916199

Following gene: 220916201

Centisome position: 24.24

GC content: 71.3

Gene sequence:

>1101_bases
ATGAGCCTCTCCGTCCTCGACGCACCCGCATCTCAGCCATGCTGCCCCACCGGCGTCACGCCGGAGCCCTCCTCGCGCGG
CCCGTCCGCCGGGCGCGTCGCGCTCCTGCTGGCGGGCGCGCTCGTCGCGTGGATCGCCGCGTACGCCGCGGCCCACCCGC
TCTCCCGCTGGCTCACCTTCGGCCTCCTCGGCCTCGCCGAGGGCTCGCACCTCGGCGAGAGCGTCGCGTTCTTCCTCTAC
GACGTGCCGAAGGTGCTGCTGCTGCTCACGCTCATCGTCTTCCTGGTGGGCATCGTCCGCTCGTTCTTCACGGCCGAGCG
GACCCGGGCGATCCTCGTCGGCAAGCGCGAGTCGGTCGGGAACGTGGTCGCCGCGTTGCTCGGGGTCGTGACCCCGTTCT
GCTCCTGCTCCGCCATCCCGCTCTTCCTCGGCTTCGTCGAGGTCGGCGTCCCGCTCGGCGTCACGTTCTCCTTCCTCGTG
TCAGCGCCCATGGTGAACGAGGTCGCCCTGGTGCTCCTGCTCGGGCTGTTCGGGTGGAAGGTGGCGGCGCTCTACCTCGT
CACCGGGCTCACCATCGCCATCCTGGCCGGCTTCGTGCTCGGGCGCATGAAGCTGGAGCGGCACGTGGAGCCGTGGGTGT
ACGAGTCGATGAAGGGCGAGGCGCGGTTCGAGAAGGAGCACCTCGGCTTCACCGGGCGCGTCGAGCGCGGCCTCCAGGCG
GTGCGCGAGGTGGTCGGCAAGGTGTGGCCCTGGGTCGTGGCCGGCATCGCGGTCGGCGCCGGCATCCACGGCTACGTGCC
CGAGGGGCTGCTCGCCTCGTTCATGGGCAAGTCCGCCTGGTGGTCGGTGCCCGCCGCGGTGGCCCTGGGCGTGCCCATGT
ACTCGAACGCCGCCGGCATCATCCCCGTGGTCGAGGCGCTCCTCGGCAAGGGCGCCGCGCTCGGCACCGTGCTCGCGTTC
ATGATGGCGGTCATCGGCCTGTCGCTGCCGGAGATCGTGATCCTGCGGAAGGTGCTGCGGCCGCCGCTCATCCTCGCGTT
CGTGGGCGTGGTGGCGTCCGGGATCCTGCTGGTCGGCTGGCTGTTCAACGCGGTCCTCTGA

Upstream 100 bases:

>100_bases
CGCCGCCGCCGTCCTCCGCTCCGTCGCCGGCGTCGCCGTGATCGCGGGCGGCGCCTGGTTCGTCCACACCGCGACCTGAC
CGCCGCATCGCAGGGTATCC

Downstream 100 bases:

>100_bases
GGCCGCGAAGCGACGAACCCTGACGGAGGAAGACGACGATGAAGATCCAGGTGCTCGGGACCGGGTGCGCGAAGTGCAAG
CAGCTCACCGCGAACGCGGA

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSLSVLDAPASQPCCPTGVTPEPSSRGPSAGRVALLLAGALVAWIAAYAAAHPLSRWLTFGLLGLAEGSHLGESVAFFLY
DVPKVLLLLTLIVFLVGIVRSFFTAERTRAILVGKRESVGNVVAALLGVVTPFCSCSAIPLFLGFVEVGVPLGVTFSFLV
SAPMVNEVALVLLLGLFGWKVAALYLVTGLTIAILAGFVLGRMKLERHVEPWVYESMKGEARFEKEHLGFTGRVERGLQA
VREVVGKVWPWVVAGIAVGAGIHGYVPEGLLASFMGKSAWWSVPAAVALGVPMYSNAAGIIPVVEALLGKGAALGTVLAF
MMAVIGLSLPEIVILRKVLRPPLILAFVGVVASGILLVGWLFNAVL

Sequences:

>Translated_366_residues
MSLSVLDAPASQPCCPTGVTPEPSSRGPSAGRVALLLAGALVAWIAAYAAAHPLSRWLTFGLLGLAEGSHLGESVAFFLY
DVPKVLLLLTLIVFLVGIVRSFFTAERTRAILVGKRESVGNVVAALLGVVTPFCSCSAIPLFLGFVEVGVPLGVTFSFLV
SAPMVNEVALVLLLGLFGWKVAALYLVTGLTIAILAGFVLGRMKLERHVEPWVYESMKGEARFEKEHLGFTGRVERGLQA
VREVVGKVWPWVVAGIAVGAGIHGYVPEGLLASFMGKSAWWSVPAAVALGVPMYSNAAGIIPVVEALLGKGAALGTVLAF
MMAVIGLSLPEIVILRKVLRPPLILAFVGVVASGILLVGWLFNAVL
>Mature_365_residues
SLSVLDAPASQPCCPTGVTPEPSSRGPSAGRVALLLAGALVAWIAAYAAAHPLSRWLTFGLLGLAEGSHLGESVAFFLYD
VPKVLLLLTLIVFLVGIVRSFFTAERTRAILVGKRESVGNVVAALLGVVTPFCSCSAIPLFLGFVEVGVPLGVTFSFLVS
APMVNEVALVLLLGLFGWKVAALYLVTGLTIAILAGFVLGRMKLERHVEPWVYESMKGEARFEKEHLGFTGRVERGLQAV
REVVGKVWPWVVAGIAVGAGIHGYVPEGLLASFMGKSAWWSVPAAVALGVPMYSNAAGIIPVVEALLGKGAALGTVLAFM
MAVIGLSLPEIVILRKVLRPPLILAFVGVVASGILLVGWLFNAVL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789541, Length=229, Percent_Identity=27.0742358078603, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38461; Mature: 38329

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVLDAPASQPCCPTGVTPEPSSRGPSAGRVALLLAGALVAWIAAYAAAHPLSRWLTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLGLAEGSHLGESVAFFLYDVPKVLLLLTLIVFLVGIVRSFFTAERTRAILVGKRESVG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHH
NVVAALLGVVTPFCSCSAIPLFLGFVEVGVPLGVTFSFLVSAPMVNEVALVLLLGLFGWK
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VAALYLVTGLTIAILAGFVLGRMKLERHVEPWVYESMKGEARFEKEHLGFTGRVERGLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
VREVVGKVWPWVVAGIAVGAGIHGYVPEGLLASFMGKSAWWSVPAAVALGVPMYSNAAGI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCHHHHHHCCCCCCCCCCH
IPVVEALLGKGAALGTVLAFMMAVIGLSLPEIVILRKVLRPPLILAFVGVVASGILLVGW
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LFNAVL
HHHHCC
>Mature Secondary Structure 
SLSVLDAPASQPCCPTGVTPEPSSRGPSAGRVALLLAGALVAWIAAYAAAHPLSRWLTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA