| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yaeB [C]
Identifier: 220916165
GI number: 220916165
Start: 1176531
End: 1176953
Strand: Reverse
Name: yaeB [C]
Synonym: A2cp1_1052
Alternate gene names: 220916165
Gene position: 1176953-1176531 (Counterclockwise)
Preceding gene: 220916168
Following gene: 220916162
Centisome position: 23.4
GC content: 74.94
Gene sequence:
>423_bases GTGACCGTCACCCCGCCGGAACCCCGCCCCGAAGCGCCGCTGCTCCGGCCGATCGGCGTCATCCGCTCCGTCCTCGGCGC CCGCGGCGACGCGCCGAAGCAGGGGTCGGAGGGCGCGCCGGACGCGTGGCTGGAGGTGTACCCGTGGGCCGCCGACGGCC TGGACGGGATCGCCGCCGGCGATGCGCTCTTGGTCGTCACCTGGCTGCACCTCGGCGATCGCTCGGTGCTCCGCGTCCAC CCGCGCGGCGATGCACGCATCCCGCTCACGGGCGTGTTCGCCACCCGATCGCCGGATCGCCCCAACCCGCTCGGCCTGCA CCCGGTGACGGTCCGGTCCGTGGAACGCCACCGGCTGCGCATCGGTCCCATCGAGGCGATCGACGGCACGCCGGTGGTGG ACCTGAAGCCGGCGCTTCGATAG
Upstream 100 bases:
>100_bases GGGGACGCCGTTGCGCGCCCGCACCGTGCGTGCTTTCCTCGGCGCCCCGTCATCGAGCGCACGCCGCCGGCGACGGGCCG CGTGCCCCCGGAGGTCGCTC
Downstream 100 bases:
>100_bases CCGCGGCGCGGCCGCTGCCACCGGGCGCCCGCAGCCCTGCCTCAGATCGACAGGATCCCCGGCCAGTGGCGCGCCCAGTC CCGCGCGCGCACGCGCCGCT
Product: hypothetical protein
Products: glycerone phosphate; (S)-lactaldehyde
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTVTPPEPRPEAPLLRPIGVIRSVLGARGDAPKQGSEGAPDAWLEVYPWAADGLDGIAAGDALLVVTWLHLGDRSVLRVH PRGDARIPLTGVFATRSPDRPNPLGLHPVTVRSVERHRLRIGPIEAIDGTPVVDLKPALR
Sequences:
>Translated_140_residues MTVTPPEPRPEAPLLRPIGVIRSVLGARGDAPKQGSEGAPDAWLEVYPWAADGLDGIAAGDALLVVTWLHLGDRSVLRVH PRGDARIPLTGVFATRSPDRPNPLGLHPVTVRSVERHRLRIGPIEAIDGTPVVDLKPALR >Mature_139_residues TVTPPEPRPEAPLLRPIGVIRSVLGARGDAPKQGSEGAPDAWLEVYPWAADGLDGIAAGDALLVVTWLHLGDRSVLRVHP RGDARIPLTGVFATRSPDRPNPLGLHPVTVRSVERHRLRIGPIEAIDGTPVVDLKPALR
Specific function: Unknown
COG id: COG1720
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0066 (virR) family [H]
Homologues:
Organism=Escherichia coli, GI1786393, Length=138, Percent_Identity=37.6811594202899, Blast_Score=63, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001378 [H]
Pfam domain/function: PF01980 UPF0066 [H]
EC number: 4.1.2.17
Molecular weight: Translated: 15010; Mature: 14878
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS01318 UPF0066
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTPPEPRPEAPLLRPIGVIRSVLGARGDAPKQGSEGAPDAWLEVYPWAADGLDGIAAG CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC DALLVVTWLHLGDRSVLRVHPRGDARIPLTGVFATRSPDRPNPLGLHPVTVRSVERHRLR CCEEEEEEHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEEE IGPIEAIDGTPVVDLKPALR ECCEECCCCCCEECCCCCCC >Mature Secondary Structure TVTPPEPRPEAPLLRPIGVIRSVLGARGDAPKQGSEGAPDAWLEVYPWAADGLDGIAAG CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC DALLVVTWLHLGDRSVLRVHPRGDARIPLTGVFATRSPDRPNPLGLHPVTVRSVERHRLR CCEEEEEEHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEEE IGPIEAIDGTPVVDLKPALR ECCEECCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-fuculose 1-phosphate
Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]