| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916121
Identifier: 220916121
GI number: 220916121
Start: 1134801
End: 1136045
Strand: Direct
Name: 220916121
Synonym: A2cp1_1008
Alternate gene names: NA
Gene position: 1134801-1136045 (Clockwise)
Preceding gene: 220916120
Following gene: 220916122
Centisome position: 22.56
GC content: 75.1
Gene sequence:
>1245_bases ATGCGCTGGCCGAACGCCCTCCGCTCGCTCCGCCAGCGCGACCTGCGGCTGTTCTTCGCCGGCCAGACCGTGTCGCTGGC CGGCAACTGGATGCAGTCCGTCGCCCAGGCGTGGCTGGTGTGGCGGCTCACCCGCTCGTCCCAGATGCTCGGCCTGGTCA ACTTCCTCGGCCAGGTGCCGGTGTTCCTGTTCAGCGTCTGGGCGGGCTCGCTCGCCGACCGCTACCCGCGCCGGCGCATG GTGCTGCTCACCCAGAGCAACGCCATCGTGCAGTCGGTGCTGCTCGCGGCGCTCACGCTCGCCGGGGCGGTGCAGCCCTG GCACGTGATGGTGCTCGCCGCCATGCTGGGCCTCACCTACGCGTTCGAGATCCCGGCCCGCCAGGCGCTGCTCGCCGACA TCGCCGGCAGGGACATGCCCAACGCGATCGCGCTCAACTCGTCGATCGTGAACGCCGCGCGCGCGGTGGGCCCGGCGCTG GCCGGCGTGCTGGTGGCGGCGCTCGGCGAGGGCGTGTGCTTCGGCCTGAACGCGCTCTCGTTCCTGGGGACCTACGCCGC GCTCTGGGTGATGCGGCCGCCGCCGCAGCCGCCGCCCGCGCTCGGGCACCGCGCCCACCTGCTCGAGGGGATCGCCTACG CCGGCCGGACCGCGCACGTGCGCGCGCTGCTCGCGCTGCTCGCGGTCTCGAGCTTCTTCGCCATGCCGTACCAGACGCTG CTGCCCGCCCTCGCCGCCGACGTGCTGCACGGCGGCGCCTCGCTGTACGGCGCGCTCCTCGCGGCCGCCGGCATCGGCGC GCTGGCGGGCGCGGTCCGGCTGCTGGTGCGCCGCAGCCTGCGCGGCCTCGGCCGGATCGTGGCGCTCGGCGCGACGCTGC TCGGCCTGGGCGTGCTGGGGCTGTCGCTGTCGCGCCACCCGGCGCTCAGCGCCATCGCGCTGCTCGTCACCGGCTTCGGC TTCGTCACCCAGACCGCCGGCACCATGACGCTGCTCCAGGGGCTCGCGCCGCCGGAGATGCGCGGGCGGGTCATGGGCGT GTTCTCGATGCTGTTCATCGGCGTGACGCCGTTCGGCGCGCTCGCGGCCGGGTTCGTGGCCCACCGGGCCGGCGTGCCGC GGACGCTCGGCGTCTCCGCCGTGGTCGTGCTCGCCGCCAGCGTCGCGTTCCACCTCGCGCTACCGCGGCTGCGCAAGGTG GTGCTCGCCGAGCACCCGACGATGTTCCCGCCCGCCGCGAGCTGA
Upstream 100 bases:
>100_bases ATGGCCCGCAACGCGCAGACCGCGAGCGCGTTCTTCGGCCTGCCACCCAACCGCGTGGTGGAGATGGGCGCGCAGATCCA GCTGTAGCGCTCGAGCCGCG
Downstream 100 bases:
>100_bases GCCGGGCGGTCGCGCGACCCGCGCGCCGGGCGCTGGACGCCGGTTCAGGCTGTGCTACGGTGCCCGCGTGATCGTGCTCG GCATCGACCCCGGCTCCCGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Transmembrane Efflux Protein; Facilitator Superfamily Transporter; Multidrug ABC Transporter; MFS Permease; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Arabinose Efflux Permease Family Protein; Macrolide-Efflux Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Transporter Facilitator Family; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; ABC Transporter Permease Protein; Transporter-Like Membrane Protein; MFS Family Membrane Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Membrane Efflux Protein MFS; Transport Transmembrane Protein; Facilitator Family Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRWPNALRSLRQRDLRLFFAGQTVSLAGNWMQSVAQAWLVWRLTRSSQMLGLVNFLGQVPVFLFSVWAGSLADRYPRRRM VLLTQSNAIVQSVLLAALTLAGAVQPWHVMVLAAMLGLTYAFEIPARQALLADIAGRDMPNAIALNSSIVNAARAVGPAL AGVLVAALGEGVCFGLNALSFLGTYAALWVMRPPPQPPPALGHRAHLLEGIAYAGRTAHVRALLALLAVSSFFAMPYQTL LPALAADVLHGGASLYGALLAAAGIGALAGAVRLLVRRSLRGLGRIVALGATLLGLGVLGLSLSRHPALSAIALLVTGFG FVTQTAGTMTLLQGLAPPEMRGRVMGVFSMLFIGVTPFGALAAGFVAHRAGVPRTLGVSAVVVLAASVAFHLALPRLRKV VLAEHPTMFPPAAS
Sequences:
>Translated_414_residues MRWPNALRSLRQRDLRLFFAGQTVSLAGNWMQSVAQAWLVWRLTRSSQMLGLVNFLGQVPVFLFSVWAGSLADRYPRRRM VLLTQSNAIVQSVLLAALTLAGAVQPWHVMVLAAMLGLTYAFEIPARQALLADIAGRDMPNAIALNSSIVNAARAVGPAL AGVLVAALGEGVCFGLNALSFLGTYAALWVMRPPPQPPPALGHRAHLLEGIAYAGRTAHVRALLALLAVSSFFAMPYQTL LPALAADVLHGGASLYGALLAAAGIGALAGAVRLLVRRSLRGLGRIVALGATLLGLGVLGLSLSRHPALSAIALLVTGFG FVTQTAGTMTLLQGLAPPEMRGRVMGVFSMLFIGVTPFGALAAGFVAHRAGVPRTLGVSAVVVLAASVAFHLALPRLRKV VLAEHPTMFPPAAS >Mature_414_residues MRWPNALRSLRQRDLRLFFAGQTVSLAGNWMQSVAQAWLVWRLTRSSQMLGLVNFLGQVPVFLFSVWAGSLADRYPRRRM VLLTQSNAIVQSVLLAALTLAGAVQPWHVMVLAAMLGLTYAFEIPARQALLADIAGRDMPNAIALNSSIVNAARAVGPAL AGVLVAALGEGVCFGLNALSFLGTYAALWVMRPPPQPPPALGHRAHLLEGIAYAGRTAHVRALLALLAVSSFFAMPYQTL LPALAADVLHGGASLYGALLAAAGIGALAGAVRLLVRRSLRGLGRIVALGATLLGLGVLGLSLSRHPALSAIALLVTGFG FVTQTAGTMTLLQGLAPPEMRGRVMGVFSMLFIGVTPFGALAAGFVAHRAGVPRTLGVSAVVVLAASVAFHLALPRLRKV VLAEHPTMFPPAAS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43378; Mature: 43378
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWPNALRSLRQRDLRLFFAGQTVSLAGNWMQSVAQAWLVWRLTRSSQMLGLVNFLGQVP CCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLFSVWAGSLADRYPRRRMVLLTQSNAIVQSVLLAALTLAGAVQPWHVMVLAAMLGLTY HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AFEIPARQALLADIAGRDMPNAIALNSSIVNAARAVGPALAGVLVAALGEGVCFGLNALS HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLGTYAALWVMRPPPQPPPALGHRAHLLEGIAYAGRTAHVRALLALLAVSSFFAMPYQTL HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH LPALAADVLHGGASLYGALLAAAGIGALAGAVRLLVRRSLRGLGRIVALGATLLGLGVLG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLSRHPALSAIALLVTGFGFVTQTAGTMTLLQGLAPPEMRGRVMGVFSMLFIGVTPFGA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH LAAGFVAHRAGVPRTLGVSAVVVLAASVAFHLALPRLRKVVLAEHPTMFPPAAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRWPNALRSLRQRDLRLFFAGQTVSLAGNWMQSVAQAWLVWRLTRSSQMLGLVNFLGQVP CCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLFSVWAGSLADRYPRRRMVLLTQSNAIVQSVLLAALTLAGAVQPWHVMVLAAMLGLTY HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AFEIPARQALLADIAGRDMPNAIALNSSIVNAARAVGPALAGVLVAALGEGVCFGLNALS HHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLGTYAALWVMRPPPQPPPALGHRAHLLEGIAYAGRTAHVRALLALLAVSSFFAMPYQTL HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH LPALAADVLHGGASLYGALLAAAGIGALAGAVRLLVRRSLRGLGRIVALGATLLGLGVLG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLSRHPALSAIALLVTGFGFVTQTAGTMTLLQGLAPPEMRGRVMGVFSMLFIGVTPFGA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH LAAGFVAHRAGVPRTLGVSAVVVLAASVAFHLALPRLRKVVLAEHPTMFPPAAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA