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The map label for this gene is 220916090

Identifier: 220916090

GI number: 220916090

Start: 1102267

End: 1102773

Strand: Direct

Name: 220916090

Synonym: A2cp1_0977

Alternate gene names: NA

Gene position: 1102267-1102773 (Clockwise)

Preceding gene: 220916081

Following gene: 220916091

Centisome position: 21.92

GC content: 75.74

Gene sequence:

>507_bases
GTGACGGTGGACGTCGATTCCTGGTACCGCGCGCACGGCGCGCGGGTGTTTCGCCGGTGCCGTCGGCTCCTGCGCGACGA
CGAGAAGGCGGTGGACGCGATGCACGACACGTTCGTGAACCTGCTCCGCGCGGGCGATCGGGTGGACGGCGAGGCGCCGG
CGTCGCTGCTCATGCGCATCGCCACCCGGGTGTGCCTGAACGTCCTGCGCGGCGAGCGCCGCCACCCCGCCGACCGCGAC
GAGCGGGTGCTGCTCGCCATCGCGTCGGCGGAGGAGCCGGAGGCGCGCACGCTCTCGCGCGTCGCGCTCCACCGGCTGCT
CGGGCGCGAGCCGGAGTCCACCCGCGTCATGGCGGTGCTGCACTGGGTCGACGGGCTCACGCTCGACGAGGTGGGCCGCG
AGGTCGGGCTCTCCGGCGCGGGGGTGCGAAAGCGGCTGAGGACGCTCCGCGCGCGCGTCGAGGCGCTGGCCGAGGACGGG
GCCGGCGTGGCGGAGGTGGCGCGATGA

Upstream 100 bases:

>100_bases
GGGGCGGCGCGGGGCTCGTGCCCGGTCCGCGACCCACATCGCGATCGGGCCGGGTTCGATGTAGAACCCGCCGGCCGCGC
GGTCGGCGAGGAGGACCCGG

Downstream 100 bases:

>100_bases
CCGCCCCGCGCACGCCGGACTGGCTGGTGGAGCGGCTGCTCGCCGGCGAGCTCCCGCCCGAGGAGGCGGCCCGCGTCCGC
GCCCGGCTGGAGGCGGAGGG

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-70 Factor

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTVDVDSWYRAHGARVFRRCRRLLRDDEKAVDAMHDTFVNLLRAGDRVDGEAPASLLMRIATRVCLNVLRGERRHPADRD
ERVLLAIASAEEPEARTLSRVALHRLLGREPESTRVMAVLHWVDGLTLDEVGREVGLSGAGVRKRLRTLRARVEALAEDG
AGVAEVAR

Sequences:

>Translated_168_residues
MTVDVDSWYRAHGARVFRRCRRLLRDDEKAVDAMHDTFVNLLRAGDRVDGEAPASLLMRIATRVCLNVLRGERRHPADRD
ERVLLAIASAEEPEARTLSRVALHRLLGREPESTRVMAVLHWVDGLTLDEVGREVGLSGAGVRKRLRTLRARVEALAEDG
AGVAEVAR
>Mature_167_residues
TVDVDSWYRAHGARVFRRCRRLLRDDEKAVDAMHDTFVNLLRAGDRVDGEAPASLLMRIATRVCLNVLRGERRHPADRDE
RVLLAIASAEEPEARTLSRVALHRLLGREPESTRVMAVLHWVDGLTLDEVGREVGLSGAGVRKRLRTLRARVEALAEDGA
GVAEVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18780; Mature: 18649

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDVDSWYRAHGARVFRRCRRLLRDDEKAVDAMHDTFVNLLRAGDRVDGEAPASLLMRI
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ATRVCLNVLRGERRHPADRDERVLLAIASAEEPEARTLSRVALHRLLGREPESTRVMAVL
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
HWVDGLTLDEVGREVGLSGAGVRKRLRTLRARVEALAEDGAGVAEVAR
HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
TVDVDSWYRAHGARVFRRCRRLLRDDEKAVDAMHDTFVNLLRAGDRVDGEAPASLLMRI
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ATRVCLNVLRGERRHPADRDERVLLAIASAEEPEARTLSRVALHRLLGREPESTRVMAVL
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
HWVDGLTLDEVGREVGLSGAGVRKRLRTLRARVEALAEDGAGVAEVAR
HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA