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The map label for this gene is ynaI [C]

Identifier: 220916051

GI number: 220916051

Start: 1055941

End: 1057242

Strand: Direct

Name: ynaI [C]

Synonym: A2cp1_0938

Alternate gene names: 220916051

Gene position: 1055941-1057242 (Clockwise)

Preceding gene: 220916049

Following gene: 220916052

Centisome position: 21.0

GC content: 74.88

Gene sequence:

>1302_bases
ATGACGCGATCCTCCCTCGCCCTCGCCCGCGCCGCCGCGCTGGCGCTCGCGGCCGCGCTCGCCGCGCCCGCCGCCGCGCA
GCCGGGCGCCGCCGCCGGCGCCCCGCCCGCCGCGGCGTCCCCCCGGGACGCGGCCGCGCCACCGGCGCGCGCGCCGCGCG
TGGAGGTGCGCGTCGAGCCCGAGCCGGAGGCCCGTCCGTTCTTCGAGGCGCACCTGCCGGCGCCGCTCCGGGAGCGCGGG
CCGCGCGGCCTGCTCTGGTGGCAGTGGCTGGCCATGCCGGGCGTGGTCCTGGTCGCCGTGACGCTCGGCTCCGTGCTCGG
GTGGCTCACGCGCAAGGGGCTCGGCCACCTCGCCGCGCGCACCCGCACCACCTGGGACGACCTGCTGCTGCAGCGCATCG
CCAGCCCGCTCACCGCGCTGTGGGCGGTCGGCCTGGTCACCGCGATGCTCCCGTGGCTGGTCCTGCCGGACGGCGCCGCC
ACGGTGGTGCACCACCTGCTGCGCGCCGTCGCGTTCCTGGTGGTGTTCTGGGGCGCCTATCGCTCGGTGGGCGTCGCGTT
CCAGGCCATGGCGCTGGCGCCGCGCACCGCCACGAACCCGGGGCTGGCCGCGTTCCTGCCGGTCGGTCGCAAGATCGCGA
AGGCGGCGGTGGTCGCCATCGGCCTCATCTCGGTCCTGAACGAGCTCGGGTTCCAGGTCGCGAGCCTCCTCGCCGGCCTC
GGCATCGGCGGCATCGCGGTGGCGTTCGGCGCCCAGAAGACCGTCGAGAACCTGTTCGGCTCGGTGTCGATCGGCGTGGA
CCAGCCGTTCCGGCAGGGCGACTACGTCAACGTGGAGGGGGTCACCGGCACGGTGGAGTCGATCGGCATGCGCTCCACGC
GCATCCGCACGCTGGACCGGACGCTCGTCACCATCCCGAACGGGAAGCTCTCCGAGATGCGGAGCGAGACCTTCGGCGCC
CGCGACCGCATCCGGCTCTCGCTCAACCTCGGGCTGTCCTACTCGACCTCGGCCGCGCAGATGCGCGAGGTGATCCGCCG
GGTGGACGCGCTGCTCCGCGCGCATCCCAGGGTCCACCCCGACGGCATCGGCGTGCGCTTCACCGCGCTGCTCGACTCGA
CGCTCAACGTGGAGGTGCTGGCCTGGTTCCAGACCACCGACTGGAACGAGTTCTGCGAGATCCGCACCGAGGTGCTGCTG
CAGATCATGGAGGCGGTGGAGGGGGCGGGGTCGTCGTTCGCGTTCCCGACCCGCACCGTCCAGCTCGTGTCGGAGGGCGG
CGCCGATCCGGCGCGCCGGTAG

Upstream 100 bases:

>100_bases
TGCCCTCCTCGAAAGCCTCCATCGGGATGCGTGCCATCCGGTTCCTCCGGCGCCAATGTAACCCGCCGCGCCGGGCGCGC
CCGCGCTATCCTCCCCCGCC

Downstream 100 bases:

>100_bases
GAGGGGCGCGCAGGCGGCCCTCCCCGAAAAGACGAAGGGCCCGGCGTCGCCGCCGGGCCCTTCGAGATTGGTGGAGCTGA
TCGGGATCGAACCGACGACC

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTRSSLALARAAALALAAALAAPAAAQPGAAAGAPPAAASPRDAAAPPARAPRVEVRVEPEPEARPFFEAHLPAPLRERG
PRGLLWWQWLAMPGVVLVAVTLGSVLGWLTRKGLGHLAARTRTTWDDLLLQRIASPLTALWAVGLVTAMLPWLVLPDGAA
TVVHHLLRAVAFLVVFWGAYRSVGVAFQAMALAPRTATNPGLAAFLPVGRKIAKAAVVAIGLISVLNELGFQVASLLAGL
GIGGIAVAFGAQKTVENLFGSVSIGVDQPFRQGDYVNVEGVTGTVESIGMRSTRIRTLDRTLVTIPNGKLSEMRSETFGA
RDRIRLSLNLGLSYSTSAAQMREVIRRVDALLRAHPRVHPDGIGVRFTALLDSTLNVEVLAWFQTTDWNEFCEIRTEVLL
QIMEAVEGAGSSFAFPTRTVQLVSEGGADPARR

Sequences:

>Translated_433_residues
MTRSSLALARAAALALAAALAAPAAAQPGAAAGAPPAAASPRDAAAPPARAPRVEVRVEPEPEARPFFEAHLPAPLRERG
PRGLLWWQWLAMPGVVLVAVTLGSVLGWLTRKGLGHLAARTRTTWDDLLLQRIASPLTALWAVGLVTAMLPWLVLPDGAA
TVVHHLLRAVAFLVVFWGAYRSVGVAFQAMALAPRTATNPGLAAFLPVGRKIAKAAVVAIGLISVLNELGFQVASLLAGL
GIGGIAVAFGAQKTVENLFGSVSIGVDQPFRQGDYVNVEGVTGTVESIGMRSTRIRTLDRTLVTIPNGKLSEMRSETFGA
RDRIRLSLNLGLSYSTSAAQMREVIRRVDALLRAHPRVHPDGIGVRFTALLDSTLNVEVLAWFQTTDWNEFCEIRTEVLL
QIMEAVEGAGSSFAFPTRTVQLVSEGGADPARR
>Mature_432_residues
TRSSLALARAAALALAAALAAPAAAQPGAAAGAPPAAASPRDAAAPPARAPRVEVRVEPEPEARPFFEAHLPAPLRERGP
RGLLWWQWLAMPGVVLVAVTLGSVLGWLTRKGLGHLAARTRTTWDDLLLQRIASPLTALWAVGLVTAMLPWLVLPDGAAT
VVHHLLRAVAFLVVFWGAYRSVGVAFQAMALAPRTATNPGLAAFLPVGRKIAKAAVVAIGLISVLNELGFQVASLLAGLG
IGGIAVAFGAQKTVENLFGSVSIGVDQPFRQGDYVNVEGVTGTVESIGMRSTRIRTLDRTLVTIPNGKLSEMRSETFGAR
DRIRLSLNLGLSYSTSAAQMREVIRRVDALLRAHPRVHPDGIGVRFTALLDSTLNVEVLAWFQTTDWNEFCEIRTEVLLQ
IMEAVEGAGSSFAFPTRTVQLVSEGGADPARR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=218, Percent_Identity=30.2752293577982, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1789291, Length=212, Percent_Identity=30.188679245283, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786670, Length=176, Percent_Identity=32.9545454545455, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 45975; Mature: 45844

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSSLALARAAALALAAALAAPAAAQPGAAAGAPPAAASPRDAAAPPARAPRVEVRVEP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
EPEARPFFEAHLPAPLRERGPRGLLWWQWLAMPGVVLVAVTLGSVLGWLTRKGLGHLAAR
CCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRTTWDDLLLQRIASPLTALWAVGLVTAMLPWLVLPDGAATVVHHLLRAVAFLVVFWGAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RSVGVAFQAMALAPRTATNPGLAAFLPVGRKIAKAAVVAIGLISVLNELGFQVASLLAGL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGGIAVAFGAQKTVENLFGSVSIGVDQPFRQGDYVNVEGVTGTVESIGMRSTRIRTLDR
CCCHHHHHHCCHHHHHHHHCCEEECCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHCC
TLVTIPNGKLSEMRSETFGARDRIRLSLNLGLSYSTSAAQMREVIRRVDALLRAHPRVHP
EEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DGIGVRFTALLDSTLNVEVLAWFQTTDWNEFCEIRTEVLLQIMEAVEGAGSSFAFPTRTV
CCCCEEEHEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QLVSEGGADPARR
HHHHCCCCCCCCC
>Mature Secondary Structure 
TRSSLALARAAALALAAALAAPAAAQPGAAAGAPPAAASPRDAAAPPARAPRVEVRVEP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
EPEARPFFEAHLPAPLRERGPRGLLWWQWLAMPGVVLVAVTLGSVLGWLTRKGLGHLAAR
CCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRTTWDDLLLQRIASPLTALWAVGLVTAMLPWLVLPDGAATVVHHLLRAVAFLVVFWGAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
RSVGVAFQAMALAPRTATNPGLAAFLPVGRKIAKAAVVAIGLISVLNELGFQVASLLAGL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGGIAVAFGAQKTVENLFGSVSIGVDQPFRQGDYVNVEGVTGTVESIGMRSTRIRTLDR
CCCHHHHHHCCHHHHHHHHCCEEECCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHCC
TLVTIPNGKLSEMRSETFGARDRIRLSLNLGLSYSTSAAQMREVIRRVDALLRAHPRVHP
EEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DGIGVRFTALLDSTLNVEVLAWFQTTDWNEFCEIRTEVLLQIMEAVEGAGSSFAFPTRTV
CCCCEEEHEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QLVSEGGADPARR
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]