| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is f1pep1 [H]
Identifier: 220915957
GI number: 220915957
Start: 946251
End: 948212
Strand: Direct
Name: f1pep1 [H]
Synonym: A2cp1_0843
Alternate gene names: 220915957
Gene position: 946251-948212 (Clockwise)
Preceding gene: 220915954
Following gene: 220915961
Centisome position: 18.81
GC content: 76.81
Gene sequence:
>1962_bases ATGCACGCCTTCCTCCTCGCATGCCTCGTCGCGGCCGGCGCCGTGGCCGCCCCGCTCGACCTCGCCCCGGTCCCGGGCCG CCCCAACCTGCTCCAGCTCGGCGTCCCCGAGGTCCCCCCGGAGGTGTCCGCCCGCCTCGAGCAGTACGAGAACGCGCGCG CCGCGGTCCTCCGCGACGTGTCGCCGGACGGCCGGGCCATGCTGGTGACCACGCGGTTCGGCAGCACCGCCCAGCTCCAC CTCGTGCTGGCGCCGCTGGGCATGCGCGAGCAGCTCACGTTCGGCGACGAGCCGGTGTCCGACGCCGCGTTCCTGCCGGG CCGGCCGGAGCGACTGCTCTACCTGCAGGACAAGGGCGGCGGCGAGTTCTTCCAGCTCTACGGCCTGGACCGGCGCACCG GCCGCTCGGAGCTGCTCACCGACGGCCGGAGCCGCCACTCGGACCTGGTGGTCTCGCCGGACGGCCGGCGCCTCGCGTAC TCGGGGACGGGCCGCAACGGCAAGGACGCGGACGTGTACGTGGCCGAGGCCGACCGGCCCGGCGCCGCGCGGCGCGTGGT GGAGGCGGAGGGGAGCTGGTCGGCGCTCGACTTCTCGCGCGACGGGCGCCGGCTGCTGGTCCGCCGGTACCGCGCCGCCT CCGACGCCGACCTCGAGCTGGTGGACCTCGCGACCGGCGCGCGGACGCCGCTGCTCGCCGGCAAGGGCTCGGTGGGCGGG GCCGCGTTCTCCGCGGACGGGAGGTACGCGTACGCCATCACCGACCGCGGCGCCGGGCACGCGGCGCTGGTCCGCGTGGA CCTCGCGCAGCCGGAGGCCGCGCCGCGTCCGGTCGCGCCCGGGGTGGCCTGGGACGTCGAGCAGGTGGTGGTGGCGCGCG ACGGCACCGTGGCCTTCACCGCCGACGCGGACGGCGTCTCGCTGCTCCACGTGGTGGACCCGCGCACCGGCCGGCTGCGC GGCGTGGCGCTCCCGGGCCGGGGCGTCGCGACGCTCCGGTTCCCCTCCGGGCGGAGCGACCTCCTCGCGGTCGGGCTGGT GAGCGCCACCTCGCCCTGGGACGCCTGGACGGTCGAGCTCCGCGGCGGGAAGGCGGTGCGCTGGACGCGCTCGGAGGTGG GCGGGCTCGATCCGGCCGGGTTCGTGGAGCCGGAGCGGGTCCGCTACCCGAGCGCCGGCGGCGCGGAGGTGCCGGCGCTC CTGTACCGGCCGCGCGGCGGCGGACGGGTCCCGGTGGTCGTGAACTGGCATGGCGGCCCCGAGAGCCAGCACCGGCCGGC GTTCAGCCCCATGGTGCAGTTCCTGGTGGCGGAGCTGGGCGTGGCGGTGCTCCAGCCGAACGTGCGCGGCTCCGCCGGCT ACGGGAAGGACTGGCTCGCGCTCGACGACGGGGTGCGCCGCGAGGAGGCGCTGAAGGACGTCCCGGCCACGTTCCAGTTC ATCGCCTCGAGGCCCGACCTCGACGCCTCGCGCGCGGTGGTGTGGGGCGGCTCCTACGGCGGCTATATGGTGCTCGCGAC GCTCACGCTGTTCCCGGGCCTGGCGAGCGCCGGCGTGGACGTGGTGGGCATCTCCTCGCTGCCGAGCTTCCTCGAGAGCA CCCAGGCGTACCGGCGCGACCTGCGCCGCGCCGAGTACGGCGACGAGCGCGTGCCGGAGGTGCGCGCGGTCCAGGAGCGG ATCTCGCCGCTGGGCCGGGCCGGGGCCATCCGCGTGCCGCTGCTCGTCATCCAGGGCGCGAACGACCCGCGCGTCCCGCG CTCCGAGGCCGAGCAGATCGTCCGGGCGGTCCGCGCGAACGGGCAGGAGGTCTGGTACCTCGTCGCGCTCGACGAGGGGC ACGGCTTCAAGAAGAAGGAGAACCGCGACCACGCCGACGCGGTCACGGTGGCGTTCCTGCAGCGGATGCTGGCCGGCGCG CCCCCCGCCGCGCAGCAGCGCGGCGCCGCCTCGGCACGCTGA
Upstream 100 bases:
>100_bases CGGCGCGCACCCGCAGGCCCCCTGCGCGCGGACCCGGGGCTCCCCCGCAGGACCGAGCCGGCTGCTCGCCTTCTTCCCCG GCCTCGCCTAGAGGTGGGGA
Downstream 100 bases:
>100_bases GGCCAACGTCCGGCGCGCCGACTAGCTCGGCGGGCCCGCTCCGCCGAGCTGCCACCGCCCGCGCAGCGTGGGCTGCTCCA GCGCGCGGGCGAGCCGGGCC
Product: peptidase S9 prolyl oligopeptidase active site domain-containing protein
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MHAFLLACLVAAGAVAAPLDLAPVPGRPNLLQLGVPEVPPEVSARLEQYENARAAVLRDVSPDGRAMLVTTRFGSTAQLH LVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGGGEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAY SGTGRNGKDADVYVAEADRPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGG AAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVEQVVVARDGTVAFTADADGVSLLHVVDPRTGRLR GVALPGRGVATLRFPSGRSDLLAVGLVSATSPWDAWTVELRGGKAVRWTRSEVGGLDPAGFVEPERVRYPSAGGAEVPAL LYRPRGGGRVPVVVNWHGGPESQHRPAFSPMVQFLVAELGVAVLQPNVRGSAGYGKDWLALDDGVRREEALKDVPATFQF IASRPDLDASRAVVWGGSYGGYMVLATLTLFPGLASAGVDVVGISSLPSFLESTQAYRRDLRRAEYGDERVPEVRAVQER ISPLGRAGAIRVPLLVIQGANDPRVPRSEAEQIVRAVRANGQEVWYLVALDEGHGFKKKENRDHADAVTVAFLQRMLAGA PPAAQQRGAASAR
Sequences:
>Translated_653_residues MHAFLLACLVAAGAVAAPLDLAPVPGRPNLLQLGVPEVPPEVSARLEQYENARAAVLRDVSPDGRAMLVTTRFGSTAQLH LVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGGGEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAY SGTGRNGKDADVYVAEADRPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGG AAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVEQVVVARDGTVAFTADADGVSLLHVVDPRTGRLR GVALPGRGVATLRFPSGRSDLLAVGLVSATSPWDAWTVELRGGKAVRWTRSEVGGLDPAGFVEPERVRYPSAGGAEVPAL LYRPRGGGRVPVVVNWHGGPESQHRPAFSPMVQFLVAELGVAVLQPNVRGSAGYGKDWLALDDGVRREEALKDVPATFQF IASRPDLDASRAVVWGGSYGGYMVLATLTLFPGLASAGVDVVGISSLPSFLESTQAYRRDLRRAEYGDERVPEVRAVQER ISPLGRAGAIRVPLLVIQGANDPRVPRSEAEQIVRAVRANGQEVWYLVALDEGHGFKKKENRDHADAVTVAFLQRMLAGA PPAAQQRGAASAR >Mature_653_residues MHAFLLACLVAAGAVAAPLDLAPVPGRPNLLQLGVPEVPPEVSARLEQYENARAAVLRDVSPDGRAMLVTTRFGSTAQLH LVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGGGEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAY SGTGRNGKDADVYVAEADRPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGG AAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVEQVVVARDGTVAFTADADGVSLLHVVDPRTGRLR GVALPGRGVATLRFPSGRSDLLAVGLVSATSPWDAWTVELRGGKAVRWTRSEVGGLDPAGFVEPERVRYPSAGGAEVPAL LYRPRGGGRVPVVVNWHGGPESQHRPAFSPMVQFLVAELGVAVLQPNVRGSAGYGKDWLALDDGVRREEALKDVPATFQF IASRPDLDASRAVVWGGSYGGYMVLATLTLFPGLASAGVDVVGISSLPSFLESTQAYRRDLRRAEYGDERVPEVRAVQER ISPLGRAGAIRVPLLVIQGANDPRVPRSEAEQIVRAVRANGQEVWYLVALDEGHGFKKKENRDHADAVTVAFLQRMLAGA PPAAQQRGAASAR
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=262, Percent_Identity=26.7175572519084, Blast_Score=82, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25144540, Length=232, Percent_Identity=37.0689655172414, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25144537, Length=232, Percent_Identity=37.0689655172414, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17552908, Length=275, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI25144543, Length=136, Percent_Identity=36.7647058823529, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25149159, Length=234, Percent_Identity=28.6324786324786, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 69646; Mature: 69646
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAFLLACLVAAGAVAAPLDLAPVPGRPNLLQLGVPEVPPEVSARLEQYENARAAVLRDV CHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECC SPDGRAMLVTTRFGSTAQLHLVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGG CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC GEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEADRP CCEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEECCCC GAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGG CHHHEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCC AAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVEQVVVARDGTVAFT EEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE ADADGVSLLHVVDPRTGRLRGVALPGRGVATLRFPSGRSDLLAVGLVSATSPWDAWTVEL ECCCCEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEE RGGKAVRWTRSEVGGLDPAGFVEPERVRYPSAGGAEVPALLYRPRGGGRVPVVVNWHGGP CCCCEEEEEHHHHCCCCCCCCCCHHHEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCC ESQHRPAFSPMVQFLVAELGVAVLQPNVRGSAGYGKDWLALDDGVRREEALKDVPATFQF CCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHH IASRPDLDASRAVVWGGSYGGYMVLATLTLFPGLASAGVDVVGISSLPSFLESTQAYRRD HHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHHH LRRAEYGDERVPEVRAVQERISPLGRAGAIRVPLLVIQGANDPRVPRSEAEQIVRAVRAN HHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC GQEVWYLVALDEGHGFKKKENRDHADAVTVAFLQRMLAGAPPAAQQRGAASAR CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MHAFLLACLVAAGAVAAPLDLAPVPGRPNLLQLGVPEVPPEVSARLEQYENARAAVLRDV CHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECC SPDGRAMLVTTRFGSTAQLHLVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGG CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC GEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEADRP CCEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEECCCC GAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGG CHHHEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCC AAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVEQVVVARDGTVAFT EEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE ADADGVSLLHVVDPRTGRLRGVALPGRGVATLRFPSGRSDLLAVGLVSATSPWDAWTVEL ECCCCEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEE RGGKAVRWTRSEVGGLDPAGFVEPERVRYPSAGGAEVPALLYRPRGGGRVPVVVNWHGGP CCCCEEEEEHHHHCCCCCCCCCCHHHEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCC ESQHRPAFSPMVQFLVAELGVAVLQPNVRGSAGYGKDWLALDDGVRREEALKDVPATFQF CCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHH IASRPDLDASRAVVWGGSYGGYMVLATLTLFPGLASAGVDVVGISSLPSFLESTQAYRRD HHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHHH LRRAEYGDERVPEVRAVQERISPLGRAGAIRVPLLVIQGANDPRVPRSEAEQIVRAVRAN HHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC GQEVWYLVALDEGHGFKKKENRDHADAVTVAFLQRMLAGAPPAAQQRGAASAR CCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]