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The map label for this gene is ygbF [C]

Identifier: 220915901

GI number: 220915901

Start: 883315

End: 883644

Strand: Direct

Name: ygbF [C]

Synonym: A2cp1_0785

Alternate gene names: 220915901

Gene position: 883315-883644 (Clockwise)

Preceding gene: 220915900

Following gene: 220915903

Centisome position: 17.56

GC content: 69.09

Gene sequence:

>330_bases
ATGCCGATGACGGTCATCGTGACCCGTGACGTTCCGGATCGTTTTCGAGGCTTCCTCGCGTCGGTCGCGCTGGAGATCGC
GCCCGGCGTCTATACGGCGCCGGACATGACTGCATCGGTGCGAGAGCGCGCGTGGACCGTTCTTGAGGACTGGCACCAGC
ATGCGCGCCAGGGCGCCGTCGTGATGACTTGGCCCGACGGCGCGGCGCCAGGCGGGCAGCGCGTGCTCGTTCTAGGGGAC
GCGCCGAGGGAGTTGTGGGTTGCAGACGGCCTGGTTCTGGCGCGCCGCGACGTTCCGACCGACTCCGGTGCGCCGTCGAT
CGCTCCGTGA

Upstream 100 bases:

>100_bases
CGCAAGCCACTCGAGCGCACGGCAAGGCGCGCCGCGGGTCGTCTCCTGCAGCAGAAGGACGTCATCCCCGAGATGATCGA
CCGCATCAAGGAGATGTTCG

Downstream 100 bases:

>100_bases
CAACTGAATAGGCGACCCAGGCTCGCAGGGAGCGGGCCTGGCTGCTATACCCAACTGTGTAAGAGGCTTCCCCGCGTGCG
CGGGGATCGACCCCTGGACC

Product: CRISPR-associated protein Cas2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPMTVIVTRDVPDRFRGFLASVALEIAPGVYTAPDMTASVRERAWTVLEDWHQHARQGAVVMTWPDGAAPGGQRVLVLGD
APRELWVADGLVLARRDVPTDSGAPSIAP

Sequences:

>Translated_109_residues
MPMTVIVTRDVPDRFRGFLASVALEIAPGVYTAPDMTASVRERAWTVLEDWHQHARQGAVVMTWPDGAAPGGQRVLVLGD
APRELWVADGLVLARRDVPTDSGAPSIAP
>Mature_108_residues
PMTVIVTRDVPDRFRGFLASVALEIAPGVYTAPDMTASVRERAWTVLEDWHQHARQGAVVMTWPDGAAPGGQRVLVLGDA
PRELWVADGLVLARRDVPTDSGAPSIAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11758; Mature: 11626

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTVIVTRDVPDRFRGFLASVALEIAPGVYTAPDMTASVRERAWTVLEDWHQHARQGAV
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCE
VMTWPDGAAPGGQRVLVLGDAPRELWVADGLVLARRDVPTDSGAPSIAP
EEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PMTVIVTRDVPDRFRGFLASVALEIAPGVYTAPDMTASVRERAWTVLEDWHQHARQGAV
CEEEEEECCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCE
VMTWPDGAAPGGQRVLVLGDAPRELWVADGLVLARRDVPTDSGAPSIAP
EEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA