| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915848
Identifier: 220915848
GI number: 220915848
Start: 822480
End: 825176
Strand: Direct
Name: 220915848
Synonym: A2cp1_0731
Alternate gene names: NA
Gene position: 822480-825176 (Clockwise)
Preceding gene: 220915847
Following gene: 220915849
Centisome position: 16.35
GC content: 72.97
Gene sequence:
>2697_bases ATGAAGACCGACCTCGCGCTCTCCTCGTCCGCGCTCGACGAGCTCGTCCTCCAGGCGCAGAAGCCCTCCCGCTACGTCGG CGCCGAGTTCGGCGCGGTGGTGAAGGACCTCTCCGCCGCCCGCGTCCGCTTCGCCCTGGCGTTCCCCGACACCTACGAGG TCGGGATGTCGAACCTGGGCTTCCGGTTGCTGTACCACCTGCTCAACGACCGGCCGGAGATCGCGTGCGAGCGCGTGTTC CTGCCGTGGCCGGACATGGAGGGCATGCTCCGCGCGCGCGGCCTCCCGCTGTTCACGCTCGAGTCGCGGGCCGCGGTGCG CGGGTTCGACGTCCTCGGCATCACGCTCCAGTTCGAGCTCGCCTACACGAGCGCGCTCGCCATGCTGGACCTCGCCGGCA TCCCGCTGCTCGCGCGGGAGCGCGGCGACGAGGATCCGCTGGTGCTGGGCGGCGGGCCGTGCGCGTTCAACCCGGAGCCG GTGGCGGACTTCTTCGACGCGTTCGCGGTGGGCGAGGGCGAGGAGGTCGCGCTGGAGATCGCCGACGCGGTCGCGGAGAG CGGCTTCCGCCGCGGCGGCGCCACGCGCCCGGAGCTGCTCCGGCGCCTGGCGCGCATCCCGGGGGTCTACGTGCCCTCGC TGTTCGCGCCGCGCTACGACCCGGTCTCGCGCACGCTCGCGGCGATCGAGCCGCTCCTGCCGGGCTACGAGAAGGTCGAG CGCCGCGTGATGCCCGACCTGAACGCGCTCCCGACCAGCGCGTACACCCGCCCGCTCGTCCCGTTCATGCAGACGGTGCA CGACCGGCTCCCCATCGAGCTGCAGCGCGGCTGCACCCGCGGCTGCCGCTTCTGCCAGGTCGGCATGATCACGCGCCCGA CCCGCCAGCGCGATCCGAAGCAGGTGCTGGCGCTCGCCGAGACCGGCCTGCGCGCCTCCGGCTACGAGGAGGTGGGGCTG CTGTCGCTCTCGTCGGGCGACTACGGCGCGCTGAACGGGCTGCTCGACGACTTCCTGGCGCGCTGGGAGGGCGAGCGGAT CGCGATGAGCCTGCCCTCGCTCCGCACCGAGACGATGAACGAGGCGCTCGCCCAGAAGATCGCCCGCATCCGCAAGACCG GGTTCACGCTCGCGCCCGAGGCCGCCACCGAGCGCATGCGCGCGGTGATCAACAAGGGCAACCGCGAGGAGGACCTGCTC CGGGCGGTCGAGTCGATCTTCGGGAACGGCTGGTCGCTGCTGAAGCTCTACTTCATGATCGGGCTCCCGGAGGAGCGCGA CGAGGACGTGGTGGCCATCGCCGAGCTGGCGAAGCGCTGCCTCGCCGCCGCCCGGCGCGTGCTGCCCAAGGGCGAGGGGT CGCCGGCCATCCACCTCGGCGCGTCGACCTTCGTGCCCAAGCCGTTCACGCCGTTCCAGTGGGAGCCGATGATCCCGCCG GAGGAGACGCGGCGCCGCCAGGCGCTCGTCACCGCGGCGCTGGGCGGCCGGAACGGCGCGATCCAGTTCAAGCCGCACGA CTCGCGGCAGTCGTCCATCGAGGGCGCGCTCGCGCTCGGCGATCGTCGCGTGGGCACCGCGGTGCTCGCCGCCTACCGCC GCGGCCAGCGCCTCGACGGCTGGACCGAGTGGTTCGACGAGCGGAACTGGCTCGAGGCGTTCGCGGAGTGCGAGCGCGAG CACGGGGTGGGGCTGGACTGGTTCGCGCACCGCCGCCGCCGGCTCGACGAGGTGCTGCCCTGGGACCGGATCGACTGCGG CGTCACCAAGGCCTACCTCCAGAAGCAGCTCGCGGCCGCGCGCAACCTCGCCGAGGTGCCGGACTGCGTGCTCGAGCCGT GCACCGTCTGCGGCGCCTGCGACTACGACGTCGTGAAGAACCGCACGTACGAGGCGAAGGACTACGTCCCCGAGCCCCCG CGCCCGCCGCGCCCGACCGACCCGCCGGCGCGCACGGTGGTGCGCGTCCGCTACGCGAAGCTCGGGCGGCTCGTGGCGCT CTCCCACCTCGAGACCATGCACGCCCTGCTCCGCGCCATCCGGCGCGCCGGGCTGCCGGTCGCGTACTCGCAGGGCTACC ACCCGAAGCCGCGGGTGTCGTTCGGCCCGGCGCTCCCGGTCGGCCTGGAGAGCCTGTGCGAGCACCTCGATCTCGATCTC CTCGGGGCGGTTGACCCGCAGGAGGTCCTGGCGCGGCTCGCCCCCGAGCTCCCGGAAGGGCTGAAGGTGCAGGAGGCGCA CGTGCTCGATCCGCACGCTGCGTCGATCTCCGAGGCGCAGCGGGCCGTCCATTACCGCGCCGAGTTTCCTCGGGAAACCT GGGGAGAGGCGGTCCTCGAGGCGCGCGTCGCCGCCTTCCGCGAGGCGGATCAGTCGGTCGTCACCCGCGCGGCGCCGCCC CGGCCCCGCGGAAAGGGCCGGGGTCAGAAGGTCGCGGCACGGAAGCAAAGAGAGATAGACTTGAAGGACATCGTGACCCA CCTCGCGGTCGAGGGGCCGGGGGCGGTCGCGTTCAGCTTGCGGGCGGATCCGTCGGGGAGTGCCAAGCCAGCCGAGGTGC TGGCGGCGATCTTCGGAGAAGACGGCACGCCGCCCCGGGGAGTGAAGGTTTTGAAGGAAGGCGTGAGCTTCGCGAGGAGC GGACCTGGCCGGCCGGAGCCGAGCCAGCCCCGCGCGCCTCGCTACCTCGACGCCTGA
Upstream 100 bases:
>100_bases GCTATTCAGGCCGGCTCCGCAGGAAACCGCCGTCAGATCCGGCGGTTCGCACCTCCAGCCGGCGGGCGACACGCGGTTCG AACCCGCGGCCCGAAGGGAC
Downstream 100 bases:
>100_bases ACGTACGACGCGCCCCGCCGGTGCCGCGCACGAAACGCGGCCGCCGGGCGCGAGGAGACGCGAAGCTTTGAGCGCCAGCT CGACAGCAGATCCGACCCTC
Product: Radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 898; Mature: 898
Protein sequence:
>898_residues MKTDLALSSSALDELVLQAQKPSRYVGAEFGAVVKDLSAARVRFALAFPDTYEVGMSNLGFRLLYHLLNDRPEIACERVF LPWPDMEGMLRARGLPLFTLESRAAVRGFDVLGITLQFELAYTSALAMLDLAGIPLLARERGDEDPLVLGGGPCAFNPEP VADFFDAFAVGEGEEVALEIADAVAESGFRRGGATRPELLRRLARIPGVYVPSLFAPRYDPVSRTLAAIEPLLPGYEKVE RRVMPDLNALPTSAYTRPLVPFMQTVHDRLPIELQRGCTRGCRFCQVGMITRPTRQRDPKQVLALAETGLRASGYEEVGL LSLSSGDYGALNGLLDDFLARWEGERIAMSLPSLRTETMNEALAQKIARIRKTGFTLAPEAATERMRAVINKGNREEDLL RAVESIFGNGWSLLKLYFMIGLPEERDEDVVAIAELAKRCLAAARRVLPKGEGSPAIHLGASTFVPKPFTPFQWEPMIPP EETRRRQALVTAALGGRNGAIQFKPHDSRQSSIEGALALGDRRVGTAVLAAYRRGQRLDGWTEWFDERNWLEAFAECERE HGVGLDWFAHRRRRLDEVLPWDRIDCGVTKAYLQKQLAAARNLAEVPDCVLEPCTVCGACDYDVVKNRTYEAKDYVPEPP RPPRPTDPPARTVVRVRYAKLGRLVALSHLETMHALLRAIRRAGLPVAYSQGYHPKPRVSFGPALPVGLESLCEHLDLDL LGAVDPQEVLARLAPELPEGLKVQEAHVLDPHAASISEAQRAVHYRAEFPRETWGEAVLEARVAAFREADQSVVTRAAPP RPRGKGRGQKVAARKQREIDLKDIVTHLAVEGPGAVAFSLRADPSGSAKPAEVLAAIFGEDGTPPRGVKVLKEGVSFARS GPGRPEPSQPRAPRYLDA
Sequences:
>Translated_898_residues MKTDLALSSSALDELVLQAQKPSRYVGAEFGAVVKDLSAARVRFALAFPDTYEVGMSNLGFRLLYHLLNDRPEIACERVF LPWPDMEGMLRARGLPLFTLESRAAVRGFDVLGITLQFELAYTSALAMLDLAGIPLLARERGDEDPLVLGGGPCAFNPEP VADFFDAFAVGEGEEVALEIADAVAESGFRRGGATRPELLRRLARIPGVYVPSLFAPRYDPVSRTLAAIEPLLPGYEKVE RRVMPDLNALPTSAYTRPLVPFMQTVHDRLPIELQRGCTRGCRFCQVGMITRPTRQRDPKQVLALAETGLRASGYEEVGL LSLSSGDYGALNGLLDDFLARWEGERIAMSLPSLRTETMNEALAQKIARIRKTGFTLAPEAATERMRAVINKGNREEDLL RAVESIFGNGWSLLKLYFMIGLPEERDEDVVAIAELAKRCLAAARRVLPKGEGSPAIHLGASTFVPKPFTPFQWEPMIPP EETRRRQALVTAALGGRNGAIQFKPHDSRQSSIEGALALGDRRVGTAVLAAYRRGQRLDGWTEWFDERNWLEAFAECERE HGVGLDWFAHRRRRLDEVLPWDRIDCGVTKAYLQKQLAAARNLAEVPDCVLEPCTVCGACDYDVVKNRTYEAKDYVPEPP RPPRPTDPPARTVVRVRYAKLGRLVALSHLETMHALLRAIRRAGLPVAYSQGYHPKPRVSFGPALPVGLESLCEHLDLDL LGAVDPQEVLARLAPELPEGLKVQEAHVLDPHAASISEAQRAVHYRAEFPRETWGEAVLEARVAAFREADQSVVTRAAPP RPRGKGRGQKVAARKQREIDLKDIVTHLAVEGPGAVAFSLRADPSGSAKPAEVLAAIFGEDGTPPRGVKVLKEGVSFARS GPGRPEPSQPRAPRYLDA >Mature_898_residues MKTDLALSSSALDELVLQAQKPSRYVGAEFGAVVKDLSAARVRFALAFPDTYEVGMSNLGFRLLYHLLNDRPEIACERVF LPWPDMEGMLRARGLPLFTLESRAAVRGFDVLGITLQFELAYTSALAMLDLAGIPLLARERGDEDPLVLGGGPCAFNPEP VADFFDAFAVGEGEEVALEIADAVAESGFRRGGATRPELLRRLARIPGVYVPSLFAPRYDPVSRTLAAIEPLLPGYEKVE RRVMPDLNALPTSAYTRPLVPFMQTVHDRLPIELQRGCTRGCRFCQVGMITRPTRQRDPKQVLALAETGLRASGYEEVGL LSLSSGDYGALNGLLDDFLARWEGERIAMSLPSLRTETMNEALAQKIARIRKTGFTLAPEAATERMRAVINKGNREEDLL RAVESIFGNGWSLLKLYFMIGLPEERDEDVVAIAELAKRCLAAARRVLPKGEGSPAIHLGASTFVPKPFTPFQWEPMIPP EETRRRQALVTAALGGRNGAIQFKPHDSRQSSIEGALALGDRRVGTAVLAAYRRGQRLDGWTEWFDERNWLEAFAECERE HGVGLDWFAHRRRRLDEVLPWDRIDCGVTKAYLQKQLAAARNLAEVPDCVLEPCTVCGACDYDVVKNRTYEAKDYVPEPP RPPRPTDPPARTVVRVRYAKLGRLVALSHLETMHALLRAIRRAGLPVAYSQGYHPKPRVSFGPALPVGLESLCEHLDLDL LGAVDPQEVLARLAPELPEGLKVQEAHVLDPHAASISEAQRAVHYRAEFPRETWGEAVLEARVAAFREADQSVVTRAAPP RPRGKGRGQKVAARKQREIDLKDIVTHLAVEGPGAVAFSLRADPSGSAKPAEVLAAIFGEDGTPPRGVKVLKEGVSFARS GPGRPEPSQPRAPRYLDA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 98851; Mature: 98851
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDLALSSSALDELVLQAQKPSRYVGAEFGAVVKDLSAARVRFALAFPDTYEVGMSNLG CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH FRLLYHLLNDRPEIACERVFLPWPDMEGMLRARGLPLFTLESRAAVRGFDVLGITLQFEL HHHHHHHHCCCCCHHHCEEECCCCCHHHHHHHCCCCEEEECCCHHHCCCEEEEEEEEEEH AYTSALAMLDLAGIPLLARERGDEDPLVLGGGPCAFNPEPVADFFDAFAVGEGEEVALEI HHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH ADAVAESGFRRGGATRPELLRRLARIPGVYVPSLFAPRYDPVSRTLAAIEPLLPGYEKVE HHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHCCCHHHHH RRVMPDLNALPTSAYTRPLVPFMQTVHDRLPIELQRGCTRGCRFCQVGMITRPTRQRDPK HHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHH QVLALAETGLRASGYEEVGLLSLSSGDYGALNGLLDDFLARWEGERIAMSLPSLRTETMN HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH EALAQKIARIRKTGFTLAPEAATERMRAVINKGNREEDLLRAVESIFGNGWSLLKLYFMI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH GLPEERDEDVVAIAELAKRCLAAARRVLPKGEGSPAIHLGASTFVPKPFTPFQWEPMIPP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC EETRRRQALVTAALGGRNGAIQFKPHDSRQSSIEGALALGDRRVGTAVLAAYRRGQRLDG HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH WTEWFDERNWLEAFAECEREHGVGLDWFAHRRRRLDEVLPWDRIDCGVTKAYLQKQLAAA HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RNLAEVPDCVLEPCTVCGACDYDVVKNRTYEAKDYVPEPPRPPRPTDPPARTVVRVRYAK HHHHHCHHHHHCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGRLVALSHLETMHALLRAIRRAGLPVAYSQGYHPKPRVSFGPALPVGLESLCEHLDLDL HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH LGAVDPQEVLARLAPELPEGLKVQEAHVLDPHAASISEAQRAVHYRAEFPRETWGEAVLE HCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARVAAFREADQSVVTRAAPPRPRGKGRGQKVAARKQREIDLKDIVTHLAVEGPGAVAFSL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE RADPSGSAKPAEVLAAIFGEDGTPPRGVKVLKEGVSFARSGPGRPEPSQPRAPRYLDA ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTDLALSSSALDELVLQAQKPSRYVGAEFGAVVKDLSAARVRFALAFPDTYEVGMSNLG CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH FRLLYHLLNDRPEIACERVFLPWPDMEGMLRARGLPLFTLESRAAVRGFDVLGITLQFEL HHHHHHHHCCCCCHHHCEEECCCCCHHHHHHHCCCCEEEECCCHHHCCCEEEEEEEEEEH AYTSALAMLDLAGIPLLARERGDEDPLVLGGGPCAFNPEPVADFFDAFAVGEGEEVALEI HHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH ADAVAESGFRRGGATRPELLRRLARIPGVYVPSLFAPRYDPVSRTLAAIEPLLPGYEKVE HHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCHHCCCCCCHHHHHHHHHHHHCCCHHHHH RRVMPDLNALPTSAYTRPLVPFMQTVHDRLPIELQRGCTRGCRFCQVGMITRPTRQRDPK HHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHH QVLALAETGLRASGYEEVGLLSLSSGDYGALNGLLDDFLARWEGERIAMSLPSLRTETMN HHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH EALAQKIARIRKTGFTLAPEAATERMRAVINKGNREEDLLRAVESIFGNGWSLLKLYFMI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH GLPEERDEDVVAIAELAKRCLAAARRVLPKGEGSPAIHLGASTFVPKPFTPFQWEPMIPP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC EETRRRQALVTAALGGRNGAIQFKPHDSRQSSIEGALALGDRRVGTAVLAAYRRGQRLDG HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH WTEWFDERNWLEAFAECEREHGVGLDWFAHRRRRLDEVLPWDRIDCGVTKAYLQKQLAAA HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RNLAEVPDCVLEPCTVCGACDYDVVKNRTYEAKDYVPEPPRPPRPTDPPARTVVRVRYAK HHHHHCHHHHHCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGRLVALSHLETMHALLRAIRRAGLPVAYSQGYHPKPRVSFGPALPVGLESLCEHLDLDL HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH LGAVDPQEVLARLAPELPEGLKVQEAHVLDPHAASISEAQRAVHYRAEFPRETWGEAVLE HCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARVAAFREADQSVVTRAAPPRPRGKGRGQKVAARKQREIDLKDIVTHLAVEGPGAVAFSL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE RADPSGSAKPAEVLAAIFGEDGTPPRGVKVLKEGVSFARSGPGRPEPSQPRAPRYLDA ECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]