| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915575
Identifier: 220915575
GI number: 220915575
Start: 522757
End: 524127
Strand: Direct
Name: 220915575
Synonym: A2cp1_0456
Alternate gene names: NA
Gene position: 522757-524127 (Clockwise)
Preceding gene: 220915574
Following gene: 220915578
Centisome position: 10.39
GC content: 75.57
Gene sequence:
>1371_bases ATGAACGCACTGATCACCGCGGCGCTGGCGCTGGCGCTCGCGCAGACGCCCGGGACCCCTTCGACGCCCGCGCCCGCGCC GGCGACGCCGCCCGCGCCCGACGCAGCGCCGGTCGCCGCCCCCGCGCCGGTCGCGCTGCCGGTGCTCACGCTCGACGACG CGCTCGCCGCTGCCGCCGCGCAGAACCTGGATCTCAAGGCGGCGCAGGCGCGGCTGCGCCAGGCCGACGAGCTCTCCTGG AAGGCGTGGTCCGGGTACCTGCCGCAGGTCACCGCCAGCGGCACCTACACGCGCAACGAGACCGAGGCGGTGCTGCCGGC CGGCTCGCTCGGACCCGGCTCTCCGAAGATCACCATCCAGGCGCAGGACCAGCTGAACGGGCTGGTCGAGGCGACCCAGG CGCTGCTCGCGCCGCAGCTCCTGTTCGCCATCCCCAACGCGAGCCGGGCCGAGGAGATCGCCCGGCTGAACGTGGAGACG GCGCGGCGCGAGGTGCTGTTCGGGGTGGCGCAGGCGTACTACGGCGCCGCCTCGCTGCGGCGGGCCATGGAGGTGTCCGA GCGGCTGCTCGAGATCGCCGCGCGGCAGGAGAAGGACGCCCGGGTGCGCTACCAGGCAGGCGCCATCGCCAAGGTGGGCC TGCTGCGCGCCGAGATCGACCGGGCCCGCGCCGAGCAGGACGTGAAGCGCTCGCAGAACGCGTTCGCCTCCGCGCGCATC GCGCTCGCGACGCTGCTCGACCGCCGGCCGGACTTCGACGTGGTCGATCCGCCCGAGCCGGTGCTGGCCGGCGACGCGGA CGCGCTGGTCGCGGCGGCGCTGCGGGATCGCCCCGACGTGCAGGCGGCCCGCCTCAACGTGGAGCTGCAGCGCGGCGCCC GGAACCAGGCGGTGGCGCGGTACCTGCCGAACCTGGGCGCGTTCGGCCGCTACACGCTCGCGAACGAGGCCGGCTTCACC GGCACGAACCACGCCTGGGCGGCGGGCCTGGCGCTGCAGTGGAAGGTGCTCGACGGCGGCCTGCGCGAGTCGGACATCCG CGAGGCGAACGCGAAGATCGACGAGGCGAACGCGTCGAGCGGGAGCGCCGAGCTGAAGGCGCGGCAGGAGGTGGAGCAGG CCTACCTCGACCTGGAGAGCGCCCGCGCCAACGCCGCGAAGGCGAAGGAGCAGCGCGACCTCGCCGCCGAGAACCAGCGC CTGGTGGACGTCGCGTTCCGGGCCGGCACCGCGACCGCGGTGGAGCAGGCGGACGCGACCGCCCAGCTCCGCACCGCCGA GGTCGGCCAGATCACCGAGTCGCTGACCGCGCAGCTCGCGGCGCTGCGGGTGCTGAAGGCGGCCGGCGCGTTCCACCCGA CCCGGCGCTGA
Upstream 100 bases:
>100_bases AGCGGCTCGGGCCGGCGGCGGAGGCCGCCGCCCCGGGGCCGGCGCGCGCGCGGCCGCCCCGCGGCGCGGGCGGAAGGCAA CACGAACGGCGGGAGGACGC
Downstream 100 bases:
>100_bases GCGTCCCTCGACTCCGCGCGGCCTCGAGGCCGCGCTACGCTCGGGATGAGCGACATTGCCGCTCACCCTGAGCGTAGGCG AGCCGAAGGCTCGCCGGAGT
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Efflux Protein Domain-Containing Protein; Efflux Transporter Outer Membrane Efflux Protein; Outer Membrane Efflux Protein Domain Protein
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNALITAALALALAQTPGTPSTPAPAPATPPAPDAAPVAAPAPVALPVLTLDDALAAAAAQNLDLKAAQARLRQADELSW KAWSGYLPQVTASGTYTRNETEAVLPAGSLGPGSPKITIQAQDQLNGLVEATQALLAPQLLFAIPNASRAEEIARLNVET ARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRAEIDRARAEQDVKRSQNAFASARI ALATLLDRRPDFDVVDPPEPVLAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVARYLPNLGAFGRYTLANEAGFT GTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSGSAELKARQEVEQAYLDLESARANAAKAKEQRDLAAENQR LVDVAFRAGTATAVEQADATAQLRTAEVGQITESLTAQLAALRVLKAAGAFHPTRR
Sequences:
>Translated_456_residues MNALITAALALALAQTPGTPSTPAPAPATPPAPDAAPVAAPAPVALPVLTLDDALAAAAAQNLDLKAAQARLRQADELSW KAWSGYLPQVTASGTYTRNETEAVLPAGSLGPGSPKITIQAQDQLNGLVEATQALLAPQLLFAIPNASRAEEIARLNVET ARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRAEIDRARAEQDVKRSQNAFASARI ALATLLDRRPDFDVVDPPEPVLAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVARYLPNLGAFGRYTLANEAGFT GTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSGSAELKARQEVEQAYLDLESARANAAKAKEQRDLAAENQR LVDVAFRAGTATAVEQADATAQLRTAEVGQITESLTAQLAALRVLKAAGAFHPTRR >Mature_456_residues MNALITAALALALAQTPGTPSTPAPAPATPPAPDAAPVAAPAPVALPVLTLDDALAAAAAQNLDLKAAQARLRQADELSW KAWSGYLPQVTASGTYTRNETEAVLPAGSLGPGSPKITIQAQDQLNGLVEATQALLAPQLLFAIPNASRAEEIARLNVET ARREVLFGVAQAYYGAASLRRAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRAEIDRARAEQDVKRSQNAFASARI ALATLLDRRPDFDVVDPPEPVLAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVARYLPNLGAFGRYTLANEAGFT GTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASSGSAELKARQEVEQAYLDLESARANAAKAKEQRDLAAENQR LVDVAFRAGTATAVEQADATAQLRTAEVGQITESLTAQLAALRVLKAAGAFHPTRR
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48176; Mature: 48176
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALITAALALALAQTPGTPSTPAPAPATPPAPDAAPVAAPAPVALPVLTLDDALAAAAA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH QNLDLKAAQARLRQADELSWKAWSGYLPQVTASGTYTRNETEAVLPAGSLGPGSPKITIQ HCCCHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEE AQDQLNGLVEATQALLAPQLLFAIPNASRAEEIARLNVETARREVLFGVAQAYYGAASLR EHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRAEIDRARAEQDVKRSQNAFASARI HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATLLDRRPDFDVVDPPEPVLAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVAR HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEHHCCCCHHHHHH YLPNLGAFGRYTLANEAGFTGTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASS HHCCCCCCCCEEECCCCCCCCCCCHHHHCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCC GSAELKARQEVEQAYLDLESARANAAKAKEQRDLAAENQRLVDVAFRAGTATAVEQADAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHCCH AQLRTAEVGQITESLTAQLAALRVLKAAGAFHPTRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNALITAALALALAQTPGTPSTPAPAPATPPAPDAAPVAAPAPVALPVLTLDDALAAAAA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH QNLDLKAAQARLRQADELSWKAWSGYLPQVTASGTYTRNETEAVLPAGSLGPGSPKITIQ HCCCHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEE AQDQLNGLVEATQALLAPQLLFAIPNASRAEEIARLNVETARREVLFGVAQAYYGAASLR EHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAMEVSERLLEIAARQEKDARVRYQAGAIAKVGLLRAEIDRARAEQDVKRSQNAFASARI HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATLLDRRPDFDVVDPPEPVLAGDADALVAAALRDRPDVQAARLNVELQRGARNQAVAR HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEHHCCCCHHHHHH YLPNLGAFGRYTLANEAGFTGTNHAWAAGLALQWKVLDGGLRESDIREANAKIDEANASS HHCCCCCCCCEEECCCCCCCCCCCHHHHCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCC GSAELKARQEVEQAYLDLESARANAAKAKEQRDLAAENQRLVDVAFRAGTATAVEQADAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHCCH AQLRTAEVGQITESLTAQLAALRVLKAAGAFHPTRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA