| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915547
Identifier: 220915547
GI number: 220915547
Start: 482967
End: 483764
Strand: Direct
Name: 220915547
Synonym: A2cp1_0428
Alternate gene names: NA
Gene position: 482967-483764 (Clockwise)
Preceding gene: 220915546
Following gene: 220915548
Centisome position: 9.6
GC content: 72.31
Gene sequence:
>798_bases GTGCCCCGGACCCTGCGCGCCATCCCCACGCTCCTCAAGGTCGGCTTCGCCGAGGCGGTCGCGTACCGCGCCGAGATGGT GGTGTGGCTGCTCTCCACCAACATGCCGCTCGTCATGCTGGCGCTGTGGACGGCGGTGGCCCGCGACGCGCCGGTGGGGC GCTTCGGCCAGCGCGACTTCGTCGCCTACTACCTCGCCACGCTGGTGGTCCGCCTGCTCACCGGCGCCTGGGTGATCTGG GAGCTGAACTACGAGATCCGCCAGGGCACGCTCGCGTTCCGGCTGCTCCGGCCGGTCCACCCGCTGCTCGCCTACGCCGC GGAGAACCTCTCCGCCATCCCGGTGCGCCTGCTGGTGTCGCTGCCCATCGCGCTCGGCGCGCTCCTGGTGGTCGGCCGCG ACCGGCTGACCGGCGACCCGCTGCTCCTGGCGCTGTTCCCGGTGACGGTGCTGGGCGCCTGGCTCATCACGTTCCTCGCC ATGGCGATCATCGGCGCGCTGGCGTTCTGGATCGACCAGGCCGGCTCGCTGTTCGAGATCTGGCTGGGCCTGTTCGGCGT GTTCTCCGGGTACCTCGTGCCGCTCGAGCTGTTCCCGCACTGGGTGGCGACCGCGGCGCGCTTCCTGCCGTTCCGGTACA TGCTGGCGTTCCCGGTGGAGATGATCATCGGGATGACCCCTCGCTCGGCCGCGCTCGCCGAGCTCGCCATCCAGTGGACG TTCGTGGGCGCGCTGGCGCTGGGCGCGCGGGGCGCCTGGGCGCTCGGGCTGCGCCGCTTCGCGGCGTTCGGAGGGTAG
Upstream 100 bases:
>100_bases CGGCGTGCCGCGCGACCGGGTGAAGCGCGAGTCGTACGGGTAGCGCCCCGCGCCATTCCGTGGCGCCCGCGCGCGCGACG ATCTACCTTTCCGCCCGCCC
Downstream 100 bases:
>100_bases GTGAGACGCTACCTCCGCCTGCTCGCCGTGCAGTTCCGCGCCTCGGCCGCGGTGGCCATGCAGTACCGCGTCGAGTTCCT GGTGGAGGGCGCGCTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance Transmembrane Protein; Multidrug ABC Transporter; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPRTLRAIPTLLKVGFAEAVAYRAEMVVWLLSTNMPLVMLALWTAVARDAPVGRFGQRDFVAYYLATLVVRLLTGAWVIW ELNYEIRQGTLAFRLLRPVHPLLAYAAENLSAIPVRLLVSLPIALGALLVVGRDRLTGDPLLLALFPVTVLGAWLITFLA MAIIGALAFWIDQAGSLFEIWLGLFGVFSGYLVPLELFPHWVATAARFLPFRYMLAFPVEMIIGMTPRSAALAELAIQWT FVGALALGARGAWALGLRRFAAFGG
Sequences:
>Translated_265_residues MPRTLRAIPTLLKVGFAEAVAYRAEMVVWLLSTNMPLVMLALWTAVARDAPVGRFGQRDFVAYYLATLVVRLLTGAWVIW ELNYEIRQGTLAFRLLRPVHPLLAYAAENLSAIPVRLLVSLPIALGALLVVGRDRLTGDPLLLALFPVTVLGAWLITFLA MAIIGALAFWIDQAGSLFEIWLGLFGVFSGYLVPLELFPHWVATAARFLPFRYMLAFPVEMIIGMTPRSAALAELAIQWT FVGALALGARGAWALGLRRFAAFGG >Mature_264_residues PRTLRAIPTLLKVGFAEAVAYRAEMVVWLLSTNMPLVMLALWTAVARDAPVGRFGQRDFVAYYLATLVVRLLTGAWVIWE LNYEIRQGTLAFRLLRPVHPLLAYAAENLSAIPVRLLVSLPIALGALLVVGRDRLTGDPLLLALFPVTVLGAWLITFLAM AIIGALAFWIDQAGSLFEIWLGLFGVFSGYLVPLELFPHWVATAARFLPFRYMLAFPVEMIIGMTPRSAALAELAIQWTF VGALALGARGAWALGLRRFAAFGG
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29125; Mature: 28994
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTLRAIPTLLKVGFAEAVAYRAEMVVWLLSTNMPLVMLALWTAVARDAPVGRFGQRDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHH VAYYLATLVVRLLTGAWVIWELNYEIRQGTLAFRLLRPVHPLLAYAAENLSAIPVRLLVS HHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPIALGALLVVGRDRLTGDPLLLALFPVTVLGAWLITFLAMAIIGALAFWIDQAGSLFEI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WLGLFGVFSGYLVPLELFPHWVATAARFLPFRYMLAFPVEMIIGMTPRSAALAELAIQWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FVGALALGARGAWALGLRRFAAFGG HHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PRTLRAIPTLLKVGFAEAVAYRAEMVVWLLSTNMPLVMLALWTAVARDAPVGRFGQRDF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHH VAYYLATLVVRLLTGAWVIWELNYEIRQGTLAFRLLRPVHPLLAYAAENLSAIPVRLLVS HHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LPIALGALLVVGRDRLTGDPLLLALFPVTVLGAWLITFLAMAIIGALAFWIDQAGSLFEI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WLGLFGVFSGYLVPLELFPHWVATAARFLPFRYMLAFPVEMIIGMTPRSAALAELAIQWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FVGALALGARGAWALGLRRFAAFGG HHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA