| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915270
Identifier: 220915270
GI number: 220915270
Start: 165911
End: 168091
Strand: Direct
Name: 220915270
Synonym: A2cp1_0149
Alternate gene names: NA
Gene position: 165911-168091 (Clockwise)
Preceding gene: 220915269
Following gene: 220915271
Centisome position: 3.3
GC content: 76.16
Gene sequence:
>2181_bases ATGACGCCCGTCCGCCTCGCGTTCCTCTGGCACATGCACCAGCCCCCCTACCGCGAGCCGGAGACGGGCGCGTACCTCAT GCCGTGGGTCCGGCTGCACGCCACCCGCGCCTACCACGACATGGCCTGGATGCTGGAGCGCCATCCGGGCGTGCGCTGCA CCGTGAACTTCACCCCGGTGCTGCTCGAGCAGCTCGAGGACTACGCGCAGGGGACCGCGCAGGACCGCCTGCTGGAGCTG AGCGCACGCCCGCCCGCCGATCTCGGCGCCGAGGATCGCCAGCAGATCCTGCGCTCGTTCTTCATGGTCGGCTGGGAGAC GAACGTGAAGCCCTTGCCGCGCTACTGGGAGCTGCTCCAGAAGCGCGGGCGGGAGCTGCGCGGGGTGGACCTGGCCCGGC TCGCGCACTCGTTCGGCGACCAGGAGCTGCAGGACCTCCAGGCGCTGTTCAACCTCGCCTGGATGGGCTTCGCGGCGCAG GCCGACGAGCCGGCGGTGCGGGCGCTGCGGGAGAAGGGGCGGGGCTACACCCGCGCCGACGTGGACGCGCTGCTCGAGGT GCAGCGGCGCATCGCGGCGGGCGTCGTGCCGCGCTGGCGCGCGCTGCAGGACCGCGGGCAGGTGGAGCTCTCCACCACGC CGTACTACCACCCCATCCTCCCGCTGCTCTGCGACACCGACGCCGCGCACCGCGCGCTGCCCGGCATCCCGCTCCCCCCG CGCTTCGCCCACCCCGAGGACGCGCGCTGGCACGTGCGCGAGGCGATCGCCGCGCACGCGCGCCGCTTCGGGCGGCCGCC CGCGGGCATGTGGCCGGCCGAGGGCTCGGTCTCGCCGGAGGCGCTCGAGATCCTGGCCTCCGAGGGCGTGGGCTGGGCGG CGAGCGACGAGGGCGTGCTGCTGCAGTCCCTGCCGGCGGCGGCGCCGCGCCTGCGCTCGGTGTACCGGCCCTGGCGCGTC GCGGCCGGCGCGGGGCGCGAGGTCCGGATGCTGTTCCGCGACCGCGCGCTCTCCGACGTCATCGGCTTCACCTACGCGAA GGTCCCGGCGCGGGACGCGGTGGCGGACTTCACCGCGCACGTGCGGGCGGTGGCCGACGCGTGGGCGCGCGACGGGCAGC CCGGCGCGCCGACGCTGGGCGTGTTCCTCGACGGCGAGAACGCCTGGGAGCACTACCCGAGCTCGGGCCACGAGTTCCTC GACCGGCTCTACGACGCGCTGGAGCGCTCCGACCGCGTGCAGACGGTGACGCTGTCCGAGGCGACCGCCGCCGCCGAGGG CCCGCCCATCGCGCGCGTCCACACCGGCTCCTGGATCGAGGCCTCCTTCCGGATCTGGATCGGCCACCGCGAGGACCGCG AGGCGTGGGCGGCGCTGGGCCGGGTCCGCGACGCGCTCGCGCAGGCGGAGGAGCGCGGCGAGGTCCCGGCCGAGCGGCTC GCCCGCGCGCGCCAGCACCTGTACGCCGCCGAGGCGTCGGACTGGTACTGGTGGTACGGCGAGGACTTCACCACCGAGCA GGCGGCGGAGTTCGACGCGCTGTTCCGCGCGCACGTGAACCGGGCGGCGCTGCTCTGCGGCGTGGACCCGCCGCCGGAGA CGCAGGCGCCCATCAAGCGCGCCGGCGCGCCGGCCCCGGGCGCGCTCGAGGCGAAGCCGCTCCGCGAGCCGGTGATGCTG CTCACGCCGACCCTGGACGGCCGCGAGACGACCTACTTCGAGTGGCAGGGCGCCGGGCTGTACCGGCCCGGCCAGCACCG CGGCTCGATGTACGGCGGCGCGCAGGCGTTCCACGTGCTCCGCTTCGGCTTCGACCTCGCCGCGCTCTACCTGCGGCTCG ATCCGGCCGAGTCCGCGGCGCGCGCCGCCGAGGTCGCGACGCACGTGCGCGTGTCGGTGCGCTCCCGGGACGGTCAGCGC TGGGTGGACTTCCCGCTCGAGCCGGACGGCGCGCCCCGCCCCGGCGCGTGGCGCGGCCAGGCGCTCGGCCGGCTCGCGTT CGCGCAGGTCGCGGAGCTCGAGCTGCCGTTCGCCGCGCTGGGCCTCGCGCCGGGCGACCGGGTCGACCTCGCCGTCCACG CGCTCCGGGGCGAGGTCGAGGTGGAGCGGCTGCCGCGCTACGGCTACCTCGCGCTCACCGTGCCCGACCAGGACTTCGAG CGCATCCACTGGCGGGTGTAG
Upstream 100 bases:
>100_bases CCGCGCCGGCGAGGGCCGGCGCGGGGCCGGCGCGGCGCGGAAGGCGCTGAGCACCGGCCGCATTTGCGCGCGGCGCGCCC GCGTTCTACCGTCCCGCCAG
Downstream 100 bases:
>100_bases CGCATCGCGCGCCCGGCGCGCGGGGCCCGGTGTAGACTCGCGGTCGCATGGGCGACGACCCCACCCGCGTCCGGACCCCG GAGGAGCGCGCCGCCGCCGC
Product: glycoside hydrolase family 57
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Amylopullulanase; Glycoside Hydrolase; Glycosy Hydrolase Family Protein; Pullulanase; Glycosyl Hydrolase Family; Family; Alpha-Amylase/Alpha-Mannosidase; Membrane Bound Alpha-Amylase; Pullulanase Glycoside Hydrolase Family; Alpha-Dextran Endo-1 6-Alpha-Glucosidase; Alpha-Mannosidase; Amylopullulanase Related Protein
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MTPVRLAFLWHMHQPPYREPETGAYLMPWVRLHATRAYHDMAWMLERHPGVRCTVNFTPVLLEQLEDYAQGTAQDRLLEL SARPPADLGAEDRQQILRSFFMVGWETNVKPLPRYWELLQKRGRELRGVDLARLAHSFGDQELQDLQALFNLAWMGFAAQ ADEPAVRALREKGRGYTRADVDALLEVQRRIAAGVVPRWRALQDRGQVELSTTPYYHPILPLLCDTDAAHRALPGIPLPP RFAHPEDARWHVREAIAAHARRFGRPPAGMWPAEGSVSPEALEILASEGVGWAASDEGVLLQSLPAAAPRLRSVYRPWRV AAGAGREVRMLFRDRALSDVIGFTYAKVPARDAVADFTAHVRAVADAWARDGQPGAPTLGVFLDGENAWEHYPSSGHEFL DRLYDALERSDRVQTVTLSEATAAAEGPPIARVHTGSWIEASFRIWIGHREDREAWAALGRVRDALAQAEERGEVPAERL ARARQHLYAAEASDWYWWYGEDFTTEQAAEFDALFRAHVNRAALLCGVDPPPETQAPIKRAGAPAPGALEAKPLREPVML LTPTLDGRETTYFEWQGAGLYRPGQHRGSMYGGAQAFHVLRFGFDLAALYLRLDPAESAARAAEVATHVRVSVRSRDGQR WVDFPLEPDGAPRPGAWRGQALGRLAFAQVAELELPFAALGLAPGDRVDLAVHALRGEVEVERLPRYGYLALTVPDQDFE RIHWRV
Sequences:
>Translated_726_residues MTPVRLAFLWHMHQPPYREPETGAYLMPWVRLHATRAYHDMAWMLERHPGVRCTVNFTPVLLEQLEDYAQGTAQDRLLEL SARPPADLGAEDRQQILRSFFMVGWETNVKPLPRYWELLQKRGRELRGVDLARLAHSFGDQELQDLQALFNLAWMGFAAQ ADEPAVRALREKGRGYTRADVDALLEVQRRIAAGVVPRWRALQDRGQVELSTTPYYHPILPLLCDTDAAHRALPGIPLPP RFAHPEDARWHVREAIAAHARRFGRPPAGMWPAEGSVSPEALEILASEGVGWAASDEGVLLQSLPAAAPRLRSVYRPWRV AAGAGREVRMLFRDRALSDVIGFTYAKVPARDAVADFTAHVRAVADAWARDGQPGAPTLGVFLDGENAWEHYPSSGHEFL DRLYDALERSDRVQTVTLSEATAAAEGPPIARVHTGSWIEASFRIWIGHREDREAWAALGRVRDALAQAEERGEVPAERL ARARQHLYAAEASDWYWWYGEDFTTEQAAEFDALFRAHVNRAALLCGVDPPPETQAPIKRAGAPAPGALEAKPLREPVML LTPTLDGRETTYFEWQGAGLYRPGQHRGSMYGGAQAFHVLRFGFDLAALYLRLDPAESAARAAEVATHVRVSVRSRDGQR WVDFPLEPDGAPRPGAWRGQALGRLAFAQVAELELPFAALGLAPGDRVDLAVHALRGEVEVERLPRYGYLALTVPDQDFE RIHWRV >Mature_725_residues TPVRLAFLWHMHQPPYREPETGAYLMPWVRLHATRAYHDMAWMLERHPGVRCTVNFTPVLLEQLEDYAQGTAQDRLLELS ARPPADLGAEDRQQILRSFFMVGWETNVKPLPRYWELLQKRGRELRGVDLARLAHSFGDQELQDLQALFNLAWMGFAAQA DEPAVRALREKGRGYTRADVDALLEVQRRIAAGVVPRWRALQDRGQVELSTTPYYHPILPLLCDTDAAHRALPGIPLPPR FAHPEDARWHVREAIAAHARRFGRPPAGMWPAEGSVSPEALEILASEGVGWAASDEGVLLQSLPAAAPRLRSVYRPWRVA AGAGREVRMLFRDRALSDVIGFTYAKVPARDAVADFTAHVRAVADAWARDGQPGAPTLGVFLDGENAWEHYPSSGHEFLD RLYDALERSDRVQTVTLSEATAAAEGPPIARVHTGSWIEASFRIWIGHREDREAWAALGRVRDALAQAEERGEVPAERLA RARQHLYAAEASDWYWWYGEDFTTEQAAEFDALFRAHVNRAALLCGVDPPPETQAPIKRAGAPAPGALEAKPLREPVMLL TPTLDGRETTYFEWQGAGLYRPGQHRGSMYGGAQAFHVLRFGFDLAALYLRLDPAESAARAAEVATHVRVSVRSRDGQRW VDFPLEPDGAPRPGAWRGQALGRLAFAQVAELELPFAALGLAPGDRVDLAVHALRGEVEVERLPRYGYLALTVPDQDFER IHWRV
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81181; Mature: 81049
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVRLAFLWHMHQPPYREPETGAYLMPWVRLHATRAYHDMAWMLERHPGVRCTVNFTPV CCCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH LLEQLEDYAQGTAQDRLLELSARPPADLGAEDRQQILRSFFMVGWETNVKPLPRYWELLQ HHHHHHHHHCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KRGRELRGVDLARLAHSFGDQELQDLQALFNLAWMGFAAQADEPAVRALREKGRGYTRAD HHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHH VDALLEVQRRIAAGVVPRWRALQDRGQVELSTTPYYHPILPLLCDTDAAHRALPGIPLPP HHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCHHCCHHHHCCCCHHHHCCCCCCCCC RFAHPEDARWHVREAIAAHARRFGRPPAGMWPAEGSVSPEALEILASEGVGWAASDEGVL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH LQSLPAAAPRLRSVYRPWRVAAGAGREVRMLFRDRALSDVIGFTYAKVPARDAVADFTAH HHHCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VRAVADAWARDGQPGAPTLGVFLDGENAWEHYPSSGHEFLDRLYDALERSDRVQTVTLSE HHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECH ATAAAEGPPIARVHTGSWIEASFRIWIGHREDREAWAALGRVRDALAQAEERGEVPAERL HHHCCCCCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ARARQHLYAAEASDWYWWYGEDFTTEQAAEFDALFRAHVNRAALLCGVDPPPETQAPIKR HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH AGAPAPGALEAKPLREPVMLLTPTLDGRETTYFEWQGAGLYRPGQHRGSMYGGAQAFHVL CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH RFGFDLAALYLRLDPAESAARAAEVATHVRVSVRSRDGQRWVDFPLEPDGAPRPGAWRGQ HHHHHHHHHHEECCCHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCHH ALGRLAFAQVAELELPFAALGLAPGDRVDLAVHALRGEVEVERLPRYGYLALTVPDQDFE HHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHH RIHWRV HHCCCC >Mature Secondary Structure TPVRLAFLWHMHQPPYREPETGAYLMPWVRLHATRAYHDMAWMLERHPGVRCTVNFTPV CCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH LLEQLEDYAQGTAQDRLLELSARPPADLGAEDRQQILRSFFMVGWETNVKPLPRYWELLQ HHHHHHHHHCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH KRGRELRGVDLARLAHSFGDQELQDLQALFNLAWMGFAAQADEPAVRALREKGRGYTRAD HHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHH VDALLEVQRRIAAGVVPRWRALQDRGQVELSTTPYYHPILPLLCDTDAAHRALPGIPLPP HHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCHHCCHHHHCCCCHHHHCCCCCCCCC RFAHPEDARWHVREAIAAHARRFGRPPAGMWPAEGSVSPEALEILASEGVGWAASDEGVL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH LQSLPAAAPRLRSVYRPWRVAAGAGREVRMLFRDRALSDVIGFTYAKVPARDAVADFTAH HHHCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VRAVADAWARDGQPGAPTLGVFLDGENAWEHYPSSGHEFLDRLYDALERSDRVQTVTLSE HHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECH ATAAAEGPPIARVHTGSWIEASFRIWIGHREDREAWAALGRVRDALAQAEERGEVPAERL HHHCCCCCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ARARQHLYAAEASDWYWWYGEDFTTEQAAEFDALFRAHVNRAALLCGVDPPPETQAPIKR HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH AGAPAPGALEAKPLREPVMLLTPTLDGRETTYFEWQGAGLYRPGQHRGSMYGGAQAFHVL CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH RFGFDLAALYLRLDPAESAARAAEVATHVRVSVRSRDGQRWVDFPLEPDGAPRPGAWRGQ HHHHHHHHHHEECCCHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCHH ALGRLAFAQVAELELPFAALGLAPGDRVDLAVHALRGEVEVERLPRYGYLALTVPDQDFE HHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHH RIHWRV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA