| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is tatC [H]
Identifier: 220915199
GI number: 220915199
Start: 88504
End: 89304
Strand: Direct
Name: tatC [H]
Synonym: A2cp1_0078
Alternate gene names: 220915199
Gene position: 88504-89304 (Clockwise)
Preceding gene: 220915198
Following gene: 220915200
Centisome position: 1.76
GC content: 68.16
Gene sequence:
>801_bases ATGAGCGAAACCGTCCCGCAGCTGCCGCCGCCGCCGTCGCCCGAGCCCGAGGGCGAGGTGAAGCTGTCGTTCCTCGATCA CCTGCGCGACCTGCGCGTCCGCATGGTGCGCGCGATGCTCGGCATCGCGATCGGGATGGGCCTGGTCGGCGGGTTCGTGC CGCAGATCGTGGACCACCTGATGAAGCCGGTGCGCGACGCGCTCCCGGCCGGCCGCCAGCAGCTCGTGTACACGAGCGCG ATCGAGCCGATGATGGTCTACATCAAGGTGGCCATGTACGGCGGCGTCTTCGTCGCGGCGCCCTGGGTGCTGTGGCAGCT CTGGCTGTTCATCGCGCCCGGCCTGTACAAGCGCGAGAAGAAGGTGGTGTTCCCGTTCCTGTTCTGGGGGACGCTGCTCT TCTACCTGGGCGCGCTGTTCTGCTTCGAGCTGGTGATGCCGCAGGCGTTCCCGGCCATGCTGGCGTTCGCAGAGAGCGAC ACGCTCTCGCCGATGCTCTCCCTCTCCGAGCAGCTCTCGCTCGTGCTCGCCATGCTGCTCGGCTTCGGGGTGGTGTTCGA GGTCCCGGTGGTCATCGCGTTCCTGTCGATGATCGGCCTGGTGCAGTGGCGCACGCTCGCGAAGTACCGGCGCATCGCCA TCATCGTGAACGTGATCGCGGCCGCGATCATCACGCCCACCGGCGACCCGCTCAACCTCGCGCTCATGGCCGTGCCGATG ATCGTCTTCTACGAGGTCGGCATCGTGCTGGCCCGGATCCTCGGCAAGAAGCCCGCCGCGGACGCCGCCCCCGCGGCCTA G
Upstream 100 bases:
>100_bases CGCGGTGCCCGCCGCCGCGCCGGCCCCCACCCCTTCGCCTGCGCCGTCCGGCGAGGGCGCCCCGCCGCCCGGCACCGGCG GCACCGCCGCGTAGGTCCGC
Downstream 100 bases:
>100_bases GCCCGCCTGGCCCGGGCGGGCGCGGCGCGCCGGCGCGCTGTTCACGGCCGGCGCGGCCGTCTAGCATCGGCGCATGCTCG TCTTCCAGTCGGTCGCGGCG
Product: Sec-independent protein translocase, TatC subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSETVPQLPPPPSPEPEGEVKLSFLDHLRDLRVRMVRAMLGIAIGMGLVGGFVPQIVDHLMKPVRDALPAGRQQLVYTSA IEPMMVYIKVAMYGGVFVAAPWVLWQLWLFIAPGLYKREKKVVFPFLFWGTLLFYLGALFCFELVMPQAFPAMLAFAESD TLSPMLSLSEQLSLVLAMLLGFGVVFEVPVVIAFLSMIGLVQWRTLAKYRRIAIIVNVIAAAIITPTGDPLNLALMAVPM IVFYEVGIVLARILGKKPAADAAPAA
Sequences:
>Translated_266_residues MSETVPQLPPPPSPEPEGEVKLSFLDHLRDLRVRMVRAMLGIAIGMGLVGGFVPQIVDHLMKPVRDALPAGRQQLVYTSA IEPMMVYIKVAMYGGVFVAAPWVLWQLWLFIAPGLYKREKKVVFPFLFWGTLLFYLGALFCFELVMPQAFPAMLAFAESD TLSPMLSLSEQLSLVLAMLLGFGVVFEVPVVIAFLSMIGLVQWRTLAKYRRIAIIVNVIAAAIITPTGDPLNLALMAVPM IVFYEVGIVLARILGKKPAADAAPAA >Mature_265_residues SETVPQLPPPPSPEPEGEVKLSFLDHLRDLRVRMVRAMLGIAIGMGLVGGFVPQIVDHLMKPVRDALPAGRQQLVYTSAI EPMMVYIKVAMYGGVFVAAPWVLWQLWLFIAPGLYKREKKVVFPFLFWGTLLFYLGALFCFELVMPQAFPAMLAFAESDT LSPMLSLSEQLSLVLAMLLGFGVVFEVPVVIAFLSMIGLVQWRTLAKYRRIAIIVNVIAAAIITPTGDPLNLALMAVPMI VFYEVGIVLARILGKKPAADAAPAA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=233, Percent_Identity=31.3304721030043, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 29199; Mature: 29068
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVPQLPPPPSPEPEGEVKLSFLDHLRDLRVRMVRAMLGIAIGMGLVGGFVPQIVDHL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKPVRDALPAGRQQLVYTSAIEPMMVYIKVAMYGGVFVAAPWVLWQLWLFIAPGLYKREK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCH KVVFPFLFWGTLLFYLGALFCFELVMPQAFPAMLAFAESDTLSPMLSLSEQLSLVLAMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GFGVVFEVPVVIAFLSMIGLVQWRTLAKYRRIAIIVNVIAAAIITPTGDPLNLALMAVPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IVFYEVGIVLARILGKKPAADAAPAA HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SETVPQLPPPPSPEPEGEVKLSFLDHLRDLRVRMVRAMLGIAIGMGLVGGFVPQIVDHL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKPVRDALPAGRQQLVYTSAIEPMMVYIKVAMYGGVFVAAPWVLWQLWLFIAPGLYKREK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCH KVVFPFLFWGTLLFYLGALFCFELVMPQAFPAMLAFAESDTLSPMLSLSEQLSLVLAMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GFGVVFEVPVVIAFLSMIGLVQWRTLAKYRRIAIIVNVIAAAIITPTGDPLNLALMAVPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IVFYEVGIVLARILGKKPAADAAPAA HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]