| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
Click here to switch to the map view.
The map label for this gene is 220915065
Identifier: 220915065
GI number: 220915065
Start: 441337
End: 441792
Strand: Reverse
Name: 220915065
Synonym: Mnod_8234
Alternate gene names: NA
Gene position: 441792-441337 (Counterclockwise)
Preceding gene: 220915066
Following gene: 220915064
Centisome position: 96.45
GC content: 68.42
Gene sequence:
>456_bases GTGAGCAAGGTCTCTCGCCGGCAGCTTGCGCTGCTCGCATCTTGCCCGCAGTGCGGTGCACGCCGCGGCATGGCGTGCCA GGGTGTGCGGGGAAATCGGAAGGCTCCGCATCAAGCGCGACTGAAGAACCTGCTCGCACGCGCGACGAAGGAAGCCGGCC ACCTCGGCGACGAGGTGCCTCCAGCCCGCATGAAGCGGCAGGGCTTCTACTGGTCCGACGAGTGGCGTGCCGTTCGGTAT CAGGCGCTCAAGCTGCACGGCGGGGCCTGCCAGTGCTGCGGCGCTCGCGGCACGAAGCGCGCCCCCCTGCACGTCGACCA TATCAAGCCCCGATCGCGCTATCCGCACCTCGCGCTGGAGATCTCGAACCTCCAGGTGCTCTGCGAGGACTGCAACCTCG GCAAGGGCGCGAGCGACGACACGGATTGGCGTCCGGCTCCGGCGAGGCTGCAATGA
Upstream 100 bases:
>100_bases TCGAGCCGCTCCGCGCTGCGGTCCGCACGCTCGAACTCGTCCGCGACAACGCTGACGAGTTCCGGGCCGCCATCATCGCC AAGCGGGGGAGGGATGCTGC
Downstream 100 bases:
>100_bases GCGCATATCCGAGCCTGCCACTCTTCACCGACGCCTTCATCGCCGACACGGGCCATCTCTCGGCTGCGGAGACCGGCGCA TACCTGATGCTGCTCATGGT
Product: HNH endonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSKVSRRQLALLASCPQCGARRGMACQGVRGNRKAPHQARLKNLLARATKEAGHLGDEVPPARMKRQGFYWSDEWRAVRY QALKLHGGACQCCGARGTKRAPLHVDHIKPRSRYPHLALEISNLQVLCEDCNLGKGASDDTDWRPAPARLQ
Sequences:
>Translated_151_residues MSKVSRRQLALLASCPQCGARRGMACQGVRGNRKAPHQARLKNLLARATKEAGHLGDEVPPARMKRQGFYWSDEWRAVRY QALKLHGGACQCCGARGTKRAPLHVDHIKPRSRYPHLALEISNLQVLCEDCNLGKGASDDTDWRPAPARLQ >Mature_150_residues SKVSRRQLALLASCPQCGARRGMACQGVRGNRKAPHQARLKNLLARATKEAGHLGDEVPPARMKRQGFYWSDEWRAVRYQ ALKLHGGACQCCGARGTKRAPLHVDHIKPRSRYPHLALEISNLQVLCEDCNLGKGASDDTDWRPAPARLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16792; Mature: 16660
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSRRQLALLASCPQCGARRGMACQGVRGNRKAPHQARLKNLLARATKEAGHLGDEVP CCCCHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PARMKRQGFYWSDEWRAVRYQALKLHGGACQCCGARGTKRAPLHVDHIKPRSRYPHLALE HHHHHHCCCCCCCCHHHHHHHHEEECCCCEEECCCCCCCCCCEEECCCCCCCCCCEEEEE ISNLQVLCEDCNLGKGASDDTDWRPAPARLQ ECCEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKVSRRQLALLASCPQCGARRGMACQGVRGNRKAPHQARLKNLLARATKEAGHLGDEVP CCCHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PARMKRQGFYWSDEWRAVRYQALKLHGGACQCCGARGTKRAPLHVDHIKPRSRYPHLALE HHHHHHCCCCCCCCHHHHHHHHEEECCCCEEECCCCCCCCCCEEECCCCCCCCCCEEEEE ISNLQVLCEDCNLGKGASDDTDWRPAPARLQ ECCEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA