| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220915025
Identifier: 220915025
GI number: 220915025
Start: 399408
End: 400046
Strand: Reverse
Name: 220915025
Synonym: Mnod_8191
Alternate gene names: NA
Gene position: 400046-399408 (Counterclockwise)
Preceding gene: 220915026
Following gene: 220915024
Centisome position: 87.33
GC content: 67.92
Gene sequence:
>639_bases TTGAGCACCCTGGAGAGCATCGTAGGCACCGCCCCCGCTTACGACCCGTCCCTGACCTACTACGCCGCATCCGTGGCCGG TCACGGCGAGTATCGGGCCTGCGAGTGGCTGCAGAAGGCCGGCTTCGTCACCCTGGTTCCGAGCCGCACGGCTGTCGTGC GGCAAGCTTCTAGAGCGGGGTCCGAGCGGGTTGAAACCGTGGTGATGGCAACGCGTTGGCCGGTCCCCGGGGGGGCGGCT CAACGGAGGTGGCCCATGCCCTCAGCTTTGTCTGTCGACCTGCGCCAGCGCGTCGTCTCGGCCGTTGCAGAAGGCGCCTC CTGCCATCAGGCCGCCGCGCGCTTCGGGGTCAGCGTGGCCAGCGTCAGCCGCTGGTCCAGGCAGCAGGAGGGCCAGGGAG ATGTCACGCCCAAGCCCATGGGCGGCGACCAGCGCTCGCAGCGCATCGAGGCTCATGCCGAGCTCATCCTGCAGACCTAC CAAGCCCACCCGCAGAGCTTCCTGCATGAGCTCTGCGAGACGCTCCAGGAGCAAGGCGTTCCGGTCAGCCGCAGTAGCCT GTCGCGCTTCTTCGCCCGGCACCGCATCACGCGGAAAAAAGGGCGACGTACGCAGCTGAGCAGGAGCGGGAGGATGTAA
Upstream 100 bases:
>100_bases GGCGAAGCTGCACGGCCTCGGCCGGAGAGCTGCGGCGAAGACCGCCGCCTGACGGTGCCGGGGCGGCCGGAATGCGCCCA GCCGCCTCATCTCCCCCACG
Downstream 100 bases:
>100_bases AGGCGGCTCGTGAGGCGTGGTTTGCCGGCCAGCTTGAGCTGGATCCGGAGCGACTGGTGTTCCTGGATGAGACCGCCGCC ACCACCAGCATGGTCCGCCG
Product: Transposase and inactivated derivatives-like protein
Products: NA
Alternate protein names: ISSpo6 Transposase Orf A; Transposase And Inactivated Derivatives-Like Protein; Transposase Of Insertion Sequence; Insertion Sequence Transposase Protein; NusG Antitermination Factor
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSTLESIVGTAPAYDPSLTYYAASVAGHGEYRACEWLQKAGFVTLVPSRTAVVRQASRAGSERVETVVMATRWPVPGGAA QRRWPMPSALSVDLRQRVVSAVAEGASCHQAAARFGVSVASVSRWSRQQEGQGDVTPKPMGGDQRSQRIEAHAELILQTY QAHPQSFLHELCETLQEQGVPVSRSSLSRFFARHRITRKKGRRTQLSRSGRM
Sequences:
>Translated_212_residues MSTLESIVGTAPAYDPSLTYYAASVAGHGEYRACEWLQKAGFVTLVPSRTAVVRQASRAGSERVETVVMATRWPVPGGAA QRRWPMPSALSVDLRQRVVSAVAEGASCHQAAARFGVSVASVSRWSRQQEGQGDVTPKPMGGDQRSQRIEAHAELILQTY QAHPQSFLHELCETLQEQGVPVSRSSLSRFFARHRITRKKGRRTQLSRSGRM >Mature_211_residues STLESIVGTAPAYDPSLTYYAASVAGHGEYRACEWLQKAGFVTLVPSRTAVVRQASRAGSERVETVVMATRWPVPGGAAQ RRWPMPSALSVDLRQRVVSAVAEGASCHQAAARFGVSVASVSRWSRQQEGQGDVTPKPMGGDQRSQRIEAHAELILQTYQ AHPQSFLHELCETLQEQGVPVSRSSLSRFFARHRITRKKGRRTQLSRSGRM
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23305; Mature: 23173
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLESIVGTAPAYDPSLTYYAASVAGHGEYRACEWLQKAGFVTLVPSRTAVVRQASRAG CCHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHCC SERVETVVMATRWPVPGGAAQRRWPMPSALSVDLRQRVVSAVAEGASCHQAAARFGVSVA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH SVSRWSRQQEGQGDVTPKPMGGDQRSQRIEAHAELILQTYQAHPQSFLHELCETLQEQGV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PVSRSSLSRFFARHRITRKKGRRTQLSRSGRM CCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCC >Mature Secondary Structure STLESIVGTAPAYDPSLTYYAASVAGHGEYRACEWLQKAGFVTLVPSRTAVVRQASRAG CHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHCC SERVETVVMATRWPVPGGAAQRRWPMPSALSVDLRQRVVSAVAEGASCHQAAARFGVSVA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH SVSRWSRQQEGQGDVTPKPMGGDQRSQRIEAHAELILQTYQAHPQSFLHELCETLQEQGV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PVSRSSLSRFFARHRITRKKGRRTQLSRSGRM CCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA