| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220915021
Identifier: 220915021
GI number: 220915021
Start: 397238
End: 398068
Strand: Reverse
Name: 220915021
Synonym: Mnod_8187
Alternate gene names: NA
Gene position: 398068-397238 (Counterclockwise)
Preceding gene: 220915022
Following gene: 220915020
Centisome position: 86.9
GC content: 69.8
Gene sequence:
>831_bases GTGACCTCCCCGGGCTTCGAGCAAGGCACCGCAGAGTATGTTGCGGAAGGATGGCCGGCGCGGACGGATCGGGCCGCCAG GCTTTTCGCCAAGCAGCACTCAGGCTTCTTGACCGACCTCGACGTCTACACTCCTGCGGAAATCGAGGTAGAACCTGTCT TTCGCGATTTCCTGCGGCCCAGAGGGCTCGGCTGGGGCGTTGCCAGCGCCGTCACTGTGCCGAGTGGTGACCGCCTCATC TTCAACGTGGAGCGCGCTTTCGCTCGTGGCCCGGTGACCCGCGATGTCGTTGCGCGCCTGGATGCCTTGCGGCCCCATCT TGCGCGTGCCGCGACGATGTCGGCGCGCCTGCGCCTTCAGACCGTGCGGGCCGCCGCACAGGCTCTCGACGTGGTCGGGG TTCCGGCGGCGATCCTCGGGAGGCAGTTGCAGGTGCTCGCAGTCAATGCCGGCTGCGAGGCGCTGTTCGGCTACACGGTT CAGGAGGCGCGCCGCTTTGCCCTCACGCACCCGGAAGCCGACAACCCACGCACCGCCCGACCCATGCCCAAGACGGCGGA TGCCGAGCTGCAGACCCCGGAGCACCGGGCCTGGCGTCTGGCCGTCCTGCAGCGGGCGGGCTGGTGCTGTGAGGATTGCG GCGCTCAGGGCGGCCGCGGCGGCGTCCGCCTCTTCGCCGATCACGTGATCGAGCGCCAGGACGGCGGTGCGCTCACGGAT CCGAACAACGGCAGGTGTCTATGTGGATCCTGTCACACCAGGAAGACCGTGGCCGAGCGGGCGCGGCGGATGGCGGTGCG GAGCGCGGCGGCCGAGCCGGGCCGTGGCTGA
Upstream 100 bases:
>100_bases TCCTGCCCGAGTTCTGGCCGAACGTCCTCTCGGATCTGGCGCGCTTTGGCGAAGGCGACGCGCCCTTCTCTTCACGACGG AGGGGAACGATTTTCGTTAC
Downstream 100 bases:
>100_bases TCCCCCCGGGGGGCCGGTCGAGAGTTTGGCGGGTCAGGGGCGGTGAACCGCACAGGGTCTCATCCGGACAAAATTCCCTC CGAGCAAAACTAGGGTGAAG
Product: HNH endonuclease
Products: NA
Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein LuxR; Endonuclease
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTSPGFEQGTAEYVAEGWPARTDRAARLFAKQHSGFLTDLDVYTPAEIEVEPVFRDFLRPRGLGWGVASAVTVPSGDRLI FNVERAFARGPVTRDVVARLDALRPHLARAATMSARLRLQTVRAAAQALDVVGVPAAILGRQLQVLAVNAGCEALFGYTV QEARRFALTHPEADNPRTARPMPKTADAELQTPEHRAWRLAVLQRAGWCCEDCGAQGGRGGVRLFADHVIERQDGGALTD PNNGRCLCGSCHTRKTVAERARRMAVRSAAAEPGRG
Sequences:
>Translated_276_residues MTSPGFEQGTAEYVAEGWPARTDRAARLFAKQHSGFLTDLDVYTPAEIEVEPVFRDFLRPRGLGWGVASAVTVPSGDRLI FNVERAFARGPVTRDVVARLDALRPHLARAATMSARLRLQTVRAAAQALDVVGVPAAILGRQLQVLAVNAGCEALFGYTV QEARRFALTHPEADNPRTARPMPKTADAELQTPEHRAWRLAVLQRAGWCCEDCGAQGGRGGVRLFADHVIERQDGGALTD PNNGRCLCGSCHTRKTVAERARRMAVRSAAAEPGRG >Mature_275_residues TSPGFEQGTAEYVAEGWPARTDRAARLFAKQHSGFLTDLDVYTPAEIEVEPVFRDFLRPRGLGWGVASAVTVPSGDRLIF NVERAFARGPVTRDVVARLDALRPHLARAATMSARLRLQTVRAAAQALDVVGVPAAILGRQLQVLAVNAGCEALFGYTVQ EARRFALTHPEADNPRTARPMPKTADAELQTPEHRAWRLAVLQRAGWCCEDCGAQGGRGGVRLFADHVIERQDGGALTDP NNGRCLCGSCHTRKTVAERARRMAVRSAAAEPGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29917; Mature: 29786
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPGFEQGTAEYVAEGWPARTDRAARLFAKQHSGFLTDLDVYTPAEIEVEPVFRDFLRP CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHCC RGLGWGVASAVTVPSGDRLIFNVERAFARGPVTRDVVARLDALRPHLARAATMSARLRLQ CCCCCCHHHEEECCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVRAAAQALDVVGVPAAILGRQLQVLAVNAGCEALFGYTVQEARRFALTHPEADNPRTAR HHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PMPKTADAELQTPEHRAWRLAVLQRAGWCCEDCGAQGGRGGVRLFADHVIERQDGGALTD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC PNNGRCLCGSCHTRKTVAERARRMAVRSAAAEPGRG CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSPGFEQGTAEYVAEGWPARTDRAARLFAKQHSGFLTDLDVYTPAEIEVEPVFRDFLRP CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHHHCC RGLGWGVASAVTVPSGDRLIFNVERAFARGPVTRDVVARLDALRPHLARAATMSARLRLQ CCCCCCHHHEEECCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVRAAAQALDVVGVPAAILGRQLQVLAVNAGCEALFGYTVQEARRFALTHPEADNPRTAR HHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PMPKTADAELQTPEHRAWRLAVLQRAGWCCEDCGAQGGRGGVRLFADHVIERQDGGALTD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC PNNGRCLCGSCHTRKTVAERARRMAVRSAAAEPGRG CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA