Click here to switch to the map view.

The map label for this gene is yyaM [H]

Identifier: 220914975

GI number: 220914975

Start: 352340

End: 353284

Strand: Reverse

Name: yyaM [H]

Synonym: Mnod_8133

Alternate gene names: 220914975

Gene position: 353284-352340 (Counterclockwise)

Preceding gene: 220914981

Following gene: 220914962

Centisome position: 77.12

GC content: 63.39

Gene sequence:

>945_bases
ATGGCTCGCATCACGCCCGCTCCAAGCGCCCCCACCCAGATCCACGCTCACCACGCCGCCAAGGCCTATATGCTTCTGAC
GTTTACGGCGCTGATCTGGGCCGGCAATGTCATCGCCAGCAAGTGGGCCGTCGGTCAGGTCTCGCCCCTGGCTCTAACGA
GCGTGCGCTGGCTCGTCGCCTGTGCAGCCCTCGTTCCGCTCGCTGCACGGCAAGTCGCATGCGAATGGCGCCTCCTTCGG
CCAGCTTGGTTCCGCATTCTCCTCATGGGCGGCTGCGGCTTCACGGCCTTTAATGCCCTGTTCTACATCGCCGGTACCTA
CACGAGCGCCACTAACATCGCGCTGTTCCAGGGCGCGATCCCAGTTGTGGTGCTGGCCTGCAGCTTCCTCGTATACCGCA
CTCGTGTGAGCTTGATCCAGGTTACCGGCGTGTTGGTCACCCTGCTCGGCGTGGCCGTTGCAGCGACACACGGTGACTGG
GAGGTGCTTCGCACATTCGCCTTCAACCGAGGCGATCTCCTCATGCTCGTCGCCTGTGTTCTATACGCCGGCTATACCGT
AGGCCTGCGAGCGCGACCGGCAATATCAGGGCTGACCTTCTTCGCTGCGATGGCGCTGGCCGCACTCCTCACCTCTCTGC
CGCTCCTGATGGTGGAGTGGGCAACAGGACGCCTGATTTGGCCGACCGGGAAGGGGTGGGCGATCATTGCGTTCGTGGGG
CTTGGTCCCTCTCTGATCTCGCAACTCTCCTTCATGCGTGGCGTCGAGCTGATCGGGCCGAATCGCGCAGGCGTGTTCGT
GAACTTGGTTCCAGTGTTCGGTGCGGGTCTCGCCGTTAGCTTGGCCGGGGAGCCGTTTCGGCTGGACAACGCCGTTGCGC
TGACGCTCGTTCTGAGCGGCATCTTCATCGCTGAGCGGCTTGGAAGGCGCAGCCGGAGTTCCTGA

Upstream 100 bases:

>100_bases
GTCCGATCTCGACCCTCCGCGGACGCTGAGCCCACGGCTGCATTCGCTGGGCAACAAGCGGTCAGCTGACGCGGTCCGGC
TGTGCGTGCTAGGGGCCGCC

Downstream 100 bases:

>100_bases
AGCAAGGTTCGGAACGGGTCACGAGCTTGCGTTCGGCGTGTTCGGCTCCGCGCCATCCGCGCCATAAGCCGACCTTCGAT
CGGAGCCTTCGGAATGGCCG

Product: protein of unknown function DUF6 transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVACAALVPLAARQVACEWRLLR
PAWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQGAIPVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDW
EVLRTFAFNRGDLLMLVACVLYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIAFVG
LGPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLVLSGIFIAERLGRRSRSS

Sequences:

>Translated_314_residues
MARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVACAALVPLAARQVACEWRLLR
PAWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQGAIPVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDW
EVLRTFAFNRGDLLMLVACVLYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIAFVG
LGPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLVLSGIFIAERLGRRSRSS
>Mature_313_residues
ARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVACAALVPLAARQVACEWRLLRP
AWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQGAIPVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDWE
VLRTFAFNRGDLLMLVACVLYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIAFVGL
GPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLVLSGIFIAERLGRRSRSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33441; Mature: 33310

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVA
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH
CAALVPLAARQVACEWRLLRPAWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEECCHH
PVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDWEVLRTFAFNRGDLLMLVACV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHH
LYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIAFVG
HHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCEEEEECCCCEEEEEEEC
LGPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLVLSG
CCHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHCCCEEEEECCCCEECCHHHHHHHHHHH
IFIAERLGRRSRSS
HHHHHHHHHCCCCC
>Mature Secondary Structure 
ARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH
CAALVPLAARQVACEWRLLRPAWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEECCHH
PVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDWEVLRTFAFNRGDLLMLVACV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHH
LYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIAFVG
HHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCEEEEECCCCEEEEEEEC
LGPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLVLSG
CCHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHCCCEEEEECCCCEECCHHHHHHHHHHH
IFIAERLGRRSRSS
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]