| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914929
Identifier: 220914929
GI number: 220914929
Start: 308093
End: 308584
Strand: Reverse
Name: 220914929
Synonym: Mnod_8082
Alternate gene names: NA
Gene position: 308584-308093 (Counterclockwise)
Preceding gene: 220914930
Following gene: 220914925
Centisome position: 67.37
GC content: 59.35
Gene sequence:
>492_bases GTGAGTGATCCCGTTGCTCTTTTCCGGGTTCTCGTTCTCCTCGCGGTGGCGAACTTCGCTCCGATCATCGCGACGAAGCT GCTCGGCAGCCGTTTCAGTACCCCTCTCGACTTCCACCAGAAGCTGCGAGATGGAAATCCCGTGTTTGGAGCCGGAAAAA CCATTCGCGGTCTTGTCGTCTCGCTTGCAGCCACAGCGCTTGTGGCTCCCCTTCTCGGGTTTCCACCCTCTGCGGGAATC TCTCTCGCGTCCCTATCGATGGCCGGGGATCTCACAGCCAGCTTCATCAAGCGCCGGCTCGGGTTGAAAGCTCACGCGCA GGCCTTCGGCTTGGACCAAATCCCGGAGGCACTCCTGCCGCTCGTGTTTCTGAGAGACCGACTGGGGCTCGATGGCATCG ACATCGTCACAGTCGTCGCAGCCTTCATCATCGGGGAGGTCATTCTGTCGCGGATATTGTTCCGCTTGGGACTCCGTGAG ACACCTTATTGA
Upstream 100 bases:
>100_bases GCAGTCCGGCGTCAAGGGTCTTCTGCTCGGCTACCGGATATGGTCCACCGCGCCGATCGTGGTAAGCGGTATCATCCCGT CGGAGTTGGCATGAACAGGC
Downstream 100 bases:
>100_bases CCTGACCGTAGTTCAGGCGTTCTCGGCGCGCACATCTACCTTTTTGCGCAAGCGGTGCAGTGTCACCTCGGGCGGACAGT TGACCCGCACGTCGACGATA
Product: protein of unknown function DUF46
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDPVALFRVLVLLAVANFAPIIATKLLGSRFSTPLDFHQKLRDGNPVFGAGKTIRGLVVSLAATALVAPLLGFPPSAGI SLASLSMAGDLTASFIKRRLGLKAHAQAFGLDQIPEALLPLVFLRDRLGLDGIDIVTVVAAFIIGEVILSRILFRLGLRE TPY
Sequences:
>Translated_163_residues MSDPVALFRVLVLLAVANFAPIIATKLLGSRFSTPLDFHQKLRDGNPVFGAGKTIRGLVVSLAATALVAPLLGFPPSAGI SLASLSMAGDLTASFIKRRLGLKAHAQAFGLDQIPEALLPLVFLRDRLGLDGIDIVTVVAAFIIGEVILSRILFRLGLRE TPY >Mature_162_residues SDPVALFRVLVLLAVANFAPIIATKLLGSRFSTPLDFHQKLRDGNPVFGAGKTIRGLVVSLAATALVAPLLGFPPSAGIS LASLSMAGDLTASFIKRRLGLKAHAQAFGLDQIPEALLPLVFLRDRLGLDGIDIVTVVAAFIIGEVILSRILFRLGLRET PY
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002726 [H]
Pfam domain/function: PF01864 DUF46 [H]
EC number: NA
Molecular weight: Translated: 17315; Mature: 17184
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVALFRVLVLLAVANFAPIIATKLLGSRFSTPLDFHQKLRDGNPVFGAGKTIRGLVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHH SLAATALVAPLLGFPPSAGISLASLSMAGDLTASFIKRRLGLKAHAQAFGLDQIPEALLP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHH LVFLRDRLGLDGIDIVTVVAAFIIGEVILSRILFRLGLRETPY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDPVALFRVLVLLAVANFAPIIATKLLGSRFSTPLDFHQKLRDGNPVFGAGKTIRGLVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHH SLAATALVAPLLGFPPSAGISLASLSMAGDLTASFIKRRLGLKAHAQAFGLDQIPEALLP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHH LVFLRDRLGLDGIDIVTVVAAFIIGEVILSRILFRLGLRETPY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]