Definition Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence.
Accession NC_011887
Length 458,070

Click here to switch to the map view.

The map label for this gene is 220914849

Identifier: 220914849

GI number: 220914849

Start: 216223

End: 217185

Strand: Reverse

Name: 220914849

Synonym: Mnod_7991

Alternate gene names: NA

Gene position: 217185-216223 (Counterclockwise)

Preceding gene: 220914850

Following gene: 220914848

Centisome position: 47.41

GC content: 70.92

Gene sequence:

>963_bases
ATGCGCCGACAAATAGCTTCTCTTTTCGCATTGAGCCTGGTGGCGCTCGCGCCGCCCGTGCAGGCAGCTGAGACGTGGCA
GCAGGCGATCGCCACCGGCCTCGGCAAGCCCGGCACGGAGATGCCGGGCGGGGTCTACCGCGTCAGCCTGCCCCGCACCG
ATCTGGCGGTGACGCTCGACGGCGTGTCGATCAAACCCGCGCTGGCTCTCGGCTCCTGGCTGGCCTTTCGGAAGGCCGGC
GAGAACCAGGTGATGGTGATGGGCGACCTCGTGCTCACCGAGGACGAGGTGAACCCGGTCATGACGCGCTTGGTCGAGGG
CGGCGTGGAGATCACGGCCCTGCACAACCACCTGTTGCGCGCCTCGCCCAACCCCCTCTACATGCACGTCTCGGGACATG
GTGAGCCTGAGACGCTCGCCGCGACGCTGATGGGGGCGCTCGGCGCGAGCCGCACCCCGTTCGGCGCCGAGACGGCGACC
GGCACGCCGCCGGCCGGCCACCCGGGCCCGGCCTCGGCCGGGGCAAGCCCGGCGCCCGCGCGGGCCACAGCTTCGGACCA
GGCGCAGCCCCTCGACACGGCGGCCATCGAGGCGGCGCTCGGGCGCAAGGGCAAGCTCAACGGCGGGGTCTACGCCGTCA
GCGTCCCGCGCGCGGAGACCCCGAGGGACCACGGGATGGATGTGCCGGAGGCGATGGGCTCGGCCATCGCGATCAACTTC
CAGCCGACCGGCGGCGGCAAGGCGGCGATCACGGGCGACTTCGTGCTGACCGCCGACGAGGTGAACCCGGTGATCAAGAC
GCTGCGCCAGAACGGCATCGAGGTGACGGCTCTGCACAACCACATGCTCGGCGACGAGCCGCGGCTGTTCTTCATGCACT
TCTGGGCCAACGACGACACGGCCAAGCTCGCCAAGGGGCTCGGCGCAGCGCTCAAACACGTCAAGGTCGCGTCGGGCGGC
TGA

Upstream 100 bases:

>100_bases
CGGCGCGACGGCGCCCTGCCCGAGGAAGGCGTGCTGCAGGCGCCGGCCCGGCGGCCGTGATGCCGGCCTGACACGAAACC
TGGTCACGAAGGAGATGACC

Downstream 100 bases:

>100_bases
GCCAGCACGCAAGGGTCGGCTCGGCCGCCCTTGCCCTCGCAAGCAGGCACATGACGAGAGGACTGGTTGCCCTCGGCGAT
CACGCCTGCGCTCGGTCAGA

Product: protein of unknown function LppY and LpqO

Products: NA

Alternate protein names: LppY/LpqO Family Protein; Lipoprotein Lpqo; LysM Domain-Containing Protein; LOW QUALITY PROTEIN Lipoprotein Lpqo; Lipoprotein

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRRQIASLFALSLVALAPPVQAAETWQQAIATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAG
ENQVMVMGDLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALGASRTPFGAETAT
GTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNGGVYAVSVPRAETPRDHGMDVPEAMGSAIAINF
QPTGGGKAAITGDFVLTADEVNPVIKTLRQNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALKHVKVASGG

Sequences:

>Translated_320_residues
MRRQIASLFALSLVALAPPVQAAETWQQAIATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAG
ENQVMVMGDLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALGASRTPFGAETAT
GTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNGGVYAVSVPRAETPRDHGMDVPEAMGSAIAINF
QPTGGGKAAITGDFVLTADEVNPVIKTLRQNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALKHVKVASGG
>Mature_320_residues
MRRQIASLFALSLVALAPPVQAAETWQQAIATGLGKPGTEMPGGVYRVSLPRTDLAVTLDGVSIKPALALGSWLAFRKAG
ENQVMVMGDLVLTEDEVNPVMTRLVEGGVEITALHNHLLRASPNPLYMHVSGHGEPETLAATLMGALGASRTPFGAETAT
GTPPAGHPGPASAGASPAPARATASDQAQPLDTAAIEAALGRKGKLNGGVYAVSVPRAETPRDHGMDVPEAMGSAIAINF
QPTGGGKAAITGDFVLTADEVNPVIKTLRQNGIEVTALHNHMLGDEPRLFFMHFWANDDTAKLAKGLGAALKHVKVASGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33055; Mature: 33055

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQIASLFALSLVALAPPVQAAETWQQAIATGLGKPGTEMPGGVYRVSLPRTDLAVTLD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEC
GVSIKPALALGSWLAFRKAGENQVMVMGDLVLTEDEVNPVMTRLVEGGVEITALHNHLLR
CCEECHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCEEEEEEHHHHHH
ASPNPLYMHVSGHGEPETLAATLMGALGASRTPFGAETATGTPPAGHPGPASAGASPAPA
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RATASDQAQPLDTAAIEAALGRKGKLNGGVYAVSVPRAETPRDHGMDVPEAMGSAIAINF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHCCCCCHHHCCCEEEEEE
QPTGGGKAAITGDFVLTADEVNPVIKTLRQNGIEVTALHNHMLGDEPRLFFMHFWANDDT
ECCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCEEEEEEECCCCH
AKLAKGLGAALKHVKVASGG
HHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure
MRRQIASLFALSLVALAPPVQAAETWQQAIATGLGKPGTEMPGGVYRVSLPRTDLAVTLD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEC
GVSIKPALALGSWLAFRKAGENQVMVMGDLVLTEDEVNPVMTRLVEGGVEITALHNHLLR
CCEECHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCEEEEEEHHHHHH
ASPNPLYMHVSGHGEPETLAATLMGALGASRTPFGAETATGTPPAGHPGPASAGASPAPA
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RATASDQAQPLDTAAIEAALGRKGKLNGGVYAVSVPRAETPRDHGMDVPEAMGSAIAINF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHCCCCCHHHCCCEEEEEE
QPTGGGKAAITGDFVLTADEVNPVIKTLRQNGIEVTALHNHMLGDEPRLFFMHFWANDDT
ECCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCEEEEEEECCCCH
AKLAKGLGAALKHVKVASGG
HHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA