| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914840
Identifier: 220914840
GI number: 220914840
Start: 204059
End: 204538
Strand: Reverse
Name: 220914840
Synonym: Mnod_7980
Alternate gene names: NA
Gene position: 204538-204059 (Counterclockwise)
Preceding gene: 220914841
Following gene: 220914839
Centisome position: 44.65
GC content: 71.88
Gene sequence:
>480_bases ATGATCTCTCGTCCGCCCCTCACCCGCCGGACCCTGCTGGCCGGTCTGGGCAGCCTGGTCGCCGTTGTGCCGCTGCGTGC CGCCGCGGGGAGCTTGCCGCGGGTCGCCGTGACCAAGGACCCGAACTGCGGCTGCTGCGAGGCCTGGGTGGCGCACCTGC GCACGGCCGGTTTTCCGGTCGCGGTGACCACCGGCCCGGTCGCGCCGCTCAAGGCCACACTGGGTGTGCCGCGGGCGCTG GCGTCTTGTCATACCGCCCAGGTTGGGGGCTACGTGATCGAGGGCCATGTCCCTGCCGAGGCGATCACCCGGCTGCTCAC CGAGAAACCCGCCGCCACCGGACTTGCGGTGCCCGGCATGCCGATCGGCTCGCCCGGCATGGAGGTCGAAGGCATGGACC CGGACACCTACGAGGTGGTGCTGTTCGGGCCCGCCGGAACGCGCACCTTCGCCCGTTACCGTGGCGCGACCCTGCTCTAA
Upstream 100 bases:
>100_bases GCGGGGCCTGCCCCGCGCGGCTGGGACTGCAGCGCCACCGGCGGTTGCCGCCCAGTCCTACCGCCACGCCGCTGAGTAAC GTTCTGCCTGGAGTGCTGTG
Downstream 100 bases:
>100_bases GCAGCCATCCGCAAGCCCTGGTAATGGCGGGGCGATCCAAGGCGCCCGCACGGCGTGCGCACGCATCAAGGGGGCCCATG GGCCCCCTGGTCGTTCCATT
Product: protein of unknown function DUF411
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MISRPPLTRRTLLAGLGSLVAVVPLRAAAGSLPRVAVTKDPNCGCCEAWVAHLRTAGFPVAVTTGPVAPLKATLGVPRAL ASCHTAQVGGYVIEGHVPAEAITRLLTEKPAATGLAVPGMPIGSPGMEVEGMDPDTYEVVLFGPAGTRTFARYRGATLL
Sequences:
>Translated_159_residues MISRPPLTRRTLLAGLGSLVAVVPLRAAAGSLPRVAVTKDPNCGCCEAWVAHLRTAGFPVAVTTGPVAPLKATLGVPRAL ASCHTAQVGGYVIEGHVPAEAITRLLTEKPAATGLAVPGMPIGSPGMEVEGMDPDTYEVVLFGPAGTRTFARYRGATLL >Mature_159_residues MISRPPLTRRTLLAGLGSLVAVVPLRAAAGSLPRVAVTKDPNCGCCEAWVAHLRTAGFPVAVTTGPVAPLKATLGVPRAL ASCHTAQVGGYVIEGHVPAEAITRLLTEKPAATGLAVPGMPIGSPGMEVEGMDPDTYEVVLFGPAGTRTFARYRGATLL
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16307; Mature: 16307
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRPPLTRRTLLAGLGSLVAVVPLRAAAGSLPRVAVTKDPNCGCCEAWVAHLRTAGFPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE AVTTGPVAPLKATLGVPRALASCHTAQVGGYVIEGHVPAEAITRLLTEKPAATGLAVPGM EEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCC PIGSPGMEVEGMDPDTYEVVLFGPAGTRTFARYRGATLL CCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHCCCCCC >Mature Secondary Structure MISRPPLTRRTLLAGLGSLVAVVPLRAAAGSLPRVAVTKDPNCGCCEAWVAHLRTAGFPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE AVTTGPVAPLKATLGVPRALASCHTAQVGGYVIEGHVPAEAITRLLTEKPAATGLAVPGM EEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCC PIGSPGMEVEGMDPDTYEVVLFGPAGTRTFARYRGATLL CCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA