Definition Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence.
Accession NC_011887
Length 458,070

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The map label for this gene is nlpD [C]

Identifier: 220914829

GI number: 220914829

Start: 190832

End: 191848

Strand: Reverse

Name: nlpD [C]

Synonym: Mnod_7968

Alternate gene names: 220914829

Gene position: 191848-190832 (Counterclockwise)

Preceding gene: 220914830

Following gene: 220914827

Centisome position: 41.88

GC content: 63.91

Gene sequence:

>1017_bases
ATGCGATCGGTACTCCGAACGGCTCTGTCCATTCCGATACTCCTTGCGGAGGTCTCGGTAGCCCGCGCCGAGGGCATTTC
GCTGCGTCTGCCTCTCGCCTGCGAGCCAGGGCACACCTGCTTCGTGCAGCACTATGTGGACCATGACCCCTCACCCGGCA
TACGCGATTACGCCTGCGGGTCACAGACCAACGATGGCCATGATGGAACCGACTTCCGTCCCCCTACCCGCGCTGCCGAA
GCCCGGGAGGTTGGGACCGTTCTGGCGGCAGCCTCAGGTCGCGTGCTGCGGACCCGCAATGACGTGCCTGACGTCTCAGT
ACGTGAGACCGGGCGTGCTGCTGTCGCCGGTGTCGAGTGCGGCAATGGCCTCGTGATCGCTCACGCTGGGGGCTACGAGA
CGCAGTACTGCCATCTCGCCAGGGACAGCCTGAGGGTACGCTCTGGGGACGTGGTGGCTGCCGGTCAGCCTATAGGCCAA
GCTGGTCTGTCTGGCGCTACGGAGTTCCCGCACCTGCATTTCACCGTCCGCCAGCACGGTAAGGTCGTCGATCCGTTCGC
CCCTGGTGCCACTACAGGCGCCTGCGACGCGGAGGCGAAGCTCGTCAGTGCTCTATGGGACGAGGTAGCCCGAGGTCGTT
TGGTCTATCGAGCGGGCACGGTGCTGAACTCGGGCTTTGCGGGTGGCCCCGTGAGTATGGATGCTGTTGAGGCAGAAGCG
ACTGAGGCCGCAGGACCGAATGCGGATGCACTGGTGGCCTGGGTTCGAGCGATCGGCCTTGCGCCGGGGGACGTTCAGCA
ACTCAACCTTACAGGGCCGGACGGTAAGGTGATCATTGAGCGTCAGGAGCCGCCCTTGGTGAGGCCACGGGCTCAATCTC
TGCTGTACGCTGGGAAGAAGCGTCCACCTGAGGGATGGCTTCCTGGGACCTATACGGCGACGTTCAAGGTGATGCGATCA
GGTTCAGCGGCCATAGAGCACACGTTCACGGCGATGCTGCCAACTCAGGTGCCGTAG

Upstream 100 bases:

>100_bases
CGCCCGGAGCTGAAGGTGACACTCAGGGCTGCCACTGGTCCACGATGGCCGAGGCGCCCTCGCGATTGGCCATGATGCCG
CTCGCGCTATTTCGGTTCTC

Downstream 100 bases:

>100_bases
CGAGGCCGTTGGCAAAGCGTTGGTTCGGGCGGCAGTCACACCAAGAATGCTCCTTCCTGTGCTACTGCGGGCAGTAACGG
CTAAGACTGCGCGTCCTACC

Product: Peptidase M23

Products: NA

Alternate protein names: Peptidase M; Periplasmic Protein; Secreted Peptidase; M23 Family Peptidase; M23 Peptidase Domain Protein; M24/M37 Family Peptidase

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE
AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ
AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA
TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS
GSAAIEHTFTAMLPTQVP

Sequences:

>Translated_338_residues
MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE
AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ
AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA
TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS
GSAAIEHTFTAMLPTQVP
>Mature_338_residues
MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE
AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ
AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA
TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS
GSAAIEHTFTAMLPTQVP

Specific function: May Be Involved In Stationary-Phase Survival. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35504; Mature: 35504

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACG
CHHHHHHHHHHHHHEEHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
SQTNDGHDGTDFRPPTRAAEAREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVEC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEEEEEEC
GNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQAGLSGATEFPHLHFTVRQHG
CCCEEEEECCCCCCCEEEEHHHHHEEECCCEEECCCCCCHHCCCCCCCCCEEEEEEECCC
KVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCHHHHHHHH
TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKK
HHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCC
RPPEGWLPGTYTATFKVMRSGSAAIEHTFTAMLPTQVP
CCCCCCCCCCHHHEEEEECCCCHHHHHHHHEECCCCCC
>Mature Secondary Structure
MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACG
CHHHHHHHHHHHHHEEHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
SQTNDGHDGTDFRPPTRAAEAREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVEC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEEEEEEC
GNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQAGLSGATEFPHLHFTVRQHG
CCCEEEEECCCCCCCEEEEHHHHHEEECCCEEECCCCCCHHCCCCCCCCCEEEEEEECCC
KVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCHHHHHHHH
TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKK
HHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCC
RPPEGWLPGTYTATFKVMRSGSAAIEHTFTAMLPTQVP
CCCCCCCCCCHHHEEEEECCCCHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA