| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is nlpD [C]
Identifier: 220914829
GI number: 220914829
Start: 190832
End: 191848
Strand: Reverse
Name: nlpD [C]
Synonym: Mnod_7968
Alternate gene names: 220914829
Gene position: 191848-190832 (Counterclockwise)
Preceding gene: 220914830
Following gene: 220914827
Centisome position: 41.88
GC content: 63.91
Gene sequence:
>1017_bases ATGCGATCGGTACTCCGAACGGCTCTGTCCATTCCGATACTCCTTGCGGAGGTCTCGGTAGCCCGCGCCGAGGGCATTTC GCTGCGTCTGCCTCTCGCCTGCGAGCCAGGGCACACCTGCTTCGTGCAGCACTATGTGGACCATGACCCCTCACCCGGCA TACGCGATTACGCCTGCGGGTCACAGACCAACGATGGCCATGATGGAACCGACTTCCGTCCCCCTACCCGCGCTGCCGAA GCCCGGGAGGTTGGGACCGTTCTGGCGGCAGCCTCAGGTCGCGTGCTGCGGACCCGCAATGACGTGCCTGACGTCTCAGT ACGTGAGACCGGGCGTGCTGCTGTCGCCGGTGTCGAGTGCGGCAATGGCCTCGTGATCGCTCACGCTGGGGGCTACGAGA CGCAGTACTGCCATCTCGCCAGGGACAGCCTGAGGGTACGCTCTGGGGACGTGGTGGCTGCCGGTCAGCCTATAGGCCAA GCTGGTCTGTCTGGCGCTACGGAGTTCCCGCACCTGCATTTCACCGTCCGCCAGCACGGTAAGGTCGTCGATCCGTTCGC CCCTGGTGCCACTACAGGCGCCTGCGACGCGGAGGCGAAGCTCGTCAGTGCTCTATGGGACGAGGTAGCCCGAGGTCGTT TGGTCTATCGAGCGGGCACGGTGCTGAACTCGGGCTTTGCGGGTGGCCCCGTGAGTATGGATGCTGTTGAGGCAGAAGCG ACTGAGGCCGCAGGACCGAATGCGGATGCACTGGTGGCCTGGGTTCGAGCGATCGGCCTTGCGCCGGGGGACGTTCAGCA ACTCAACCTTACAGGGCCGGACGGTAAGGTGATCATTGAGCGTCAGGAGCCGCCCTTGGTGAGGCCACGGGCTCAATCTC TGCTGTACGCTGGGAAGAAGCGTCCACCTGAGGGATGGCTTCCTGGGACCTATACGGCGACGTTCAAGGTGATGCGATCA GGTTCAGCGGCCATAGAGCACACGTTCACGGCGATGCTGCCAACTCAGGTGCCGTAG
Upstream 100 bases:
>100_bases CGCCCGGAGCTGAAGGTGACACTCAGGGCTGCCACTGGTCCACGATGGCCGAGGCGCCCTCGCGATTGGCCATGATGCCG CTCGCGCTATTTCGGTTCTC
Downstream 100 bases:
>100_bases CGAGGCCGTTGGCAAAGCGTTGGTTCGGGCGGCAGTCACACCAAGAATGCTCCTTCCTGTGCTACTGCGGGCAGTAACGG CTAAGACTGCGCGTCCTACC
Product: Peptidase M23
Products: NA
Alternate protein names: Peptidase M; Periplasmic Protein; Secreted Peptidase; M23 Family Peptidase; M23 Peptidase Domain Protein; M24/M37 Family Peptidase
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS GSAAIEHTFTAMLPTQVP
Sequences:
>Translated_338_residues MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS GSAAIEHTFTAMLPTQVP >Mature_338_residues MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACGSQTNDGHDGTDFRPPTRAAE AREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVECGNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQ AGLSGATEFPHLHFTVRQHGKVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKKRPPEGWLPGTYTATFKVMRS GSAAIEHTFTAMLPTQVP
Specific function: May Be Involved In Stationary-Phase Survival. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35504; Mature: 35504
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACG CHHHHHHHHHHHHHEEHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC SQTNDGHDGTDFRPPTRAAEAREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVEC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEEEEEEC GNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQAGLSGATEFPHLHFTVRQHG CCCEEEEECCCCCCCEEEEHHHHHEEECCCEEECCCCCCHHCCCCCCCCCEEEEEEECCC KVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCHHHHHHHH TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKK HHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCC RPPEGWLPGTYTATFKVMRSGSAAIEHTFTAMLPTQVP CCCCCCCCCCHHHEEEEECCCCHHHHHHHHEECCCCCC >Mature Secondary Structure MRSVLRTALSIPILLAEVSVARAEGISLRLPLACEPGHTCFVQHYVDHDPSPGIRDYACG CHHHHHHHHHHHHHEEHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC SQTNDGHDGTDFRPPTRAAEAREVGTVLAAASGRVLRTRNDVPDVSVRETGRAAVAGVEC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHCCCCEEEEEEEC GNGLVIAHAGGYETQYCHLARDSLRVRSGDVVAAGQPIGQAGLSGATEFPHLHFTVRQHG CCCEEEEECCCCCCCEEEEHHHHHEEECCCEEECCCCCCHHCCCCCCCCCEEEEEEECCC KVVDPFAPGATTGACDAEAKLVSALWDEVARGRLVYRAGTVLNSGFAGGPVSMDAVEAEA CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCHHHHHHHH TEAAGPNADALVAWVRAIGLAPGDVQQLNLTGPDGKVIIERQEPPLVRPRAQSLLYAGKK HHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCC RPPEGWLPGTYTATFKVMRSGSAAIEHTFTAMLPTQVP CCCCCCCCCCHHHEEEEECCCCHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA