| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914821
Identifier: 220914821
GI number: 220914821
Start: 182143
End: 183393
Strand: Reverse
Name: 220914821
Synonym: Mnod_7959
Alternate gene names: NA
Gene position: 183393-182143 (Counterclockwise)
Preceding gene: 220914823
Following gene: 220914820
Centisome position: 40.04
GC content: 61.79
Gene sequence:
>1251_bases ATGCCGGAGGCTGGAATTTGGAGAAAGCGCCTCCCGCGCTTGAACCCCGGACTAAGCTGCGTCGTTGCCGTATATCCAGC GTTAAGGGTGCCGCGCGTGGCAGGTGCGAGTGAATGCGCAGCGTGGGATGAGGAGAAGCGGCTGGCGGCTTTGCGCGCCT ACCAAGTTCTCGATACTCCCAATGAGGACGGATTCGACGAGATCGTCCAGTTAGCCGCCCAGATCTGCCAGACGCCAATG GCGGCCATCAGCCTCGTCGAAGACCGCCGACAATGGTTCAAGGCTGAGGTGGGCCTGGGCATCAGAGAAACACCGATCGA TGCATCGGTTTGCGCCACAACGGTTCTCGCGCCTGGGCTCACCATAGTGCCGGATATGATCTTGGACGCGAGGTTCGCAA CCAACCCTCTGATCGCGAGCTGCCCCTACCTCCGCTTTTACGCGGGAGCACGGTTGGAGACGCCGGACGGGCTGCCACTC GGTAGTCTCTGTGTGCTCGACCGGAATCCGCGACCGGGTCTGAGCAGTGAGCAGGCATCGGCGTTGATGACTCTATCCCG GCAGGTAACAAACCAGCTTGAGCTACGCCGGACAGTGATCGAGCGCGACGAGGCGCTGTCCAGGGTGCGCCAAACCGAGA CGCGGCAGCACCTGCTCGTGCGCGAGCTTCATCATCGCACGCGCAACAACCTCGCCGTCTTGCAAGCACTGTTCGGCGTC ACCACGCGAGCGAGCGGCAGCGTCGATGAGCTATACCGCTCCTTCGCCGACCGGATCGCCTCTCTCGCCAGGACACAGGC CCTTCTGTCCGACGACTATTGGCAAACTGCACGCCTGCATGACATGCTCGCGCACGAGTTCGAGTGGCACATCAAACATA GGAATGGCCGCGTGGTGCTGGACGGCCCTGAGCTTGACCTCGCCGCGGACCTCGCCGTGCCGTTCGGGATGGCTCTTCAT GAACTCAGGTCGAATGCCGAACGCCATGGCGCGCTCTCTTCGGCGGATGGCAAGGTCGAAGTGAAGTGGAGCCTCATCAG GCAGGATGGCAAACGCCTGCTGCATCTCAACTGGTCTGAGCAGGGCGGGCCTCGTGCACGGAAACCGTTCCGGGCTGGCG TGGGCATGAAGATCCAACGAATGCTGGAGGTGCAGTGCGGGGCAGAGGTGAAAACTGAGTTCCTGACCGAGGGGCTTCAC GTCAGTATCACGGCCCCGTTAATTGAAGCGCGGCTGGTTCCGGAGTATTAA
Upstream 100 bases:
>100_bases CTTCGGTCACCGACACCTCTTCCGCGAACTCCCGGACCGCCCATCCGTCACTCCTGGTCCGCTTGATCGTGCAGGCGATC GTCCGGCGCGAGTGTCGGTC
Downstream 100 bases:
>100_bases GTGGCTCCGAAGTCCACGATTCGGACGAACTGGCCCGTGGCGGTGGGCCGAGCTATGGTGAGCTATGTTTGGAAATAATC CGCCACCTGCGGTTTGTGGC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPEAGIWRKRLPRLNPGLSCVVAVYPALRVPRVAGASECAAWDEEKRLAALRAYQVLDTPNEDGFDEIVQLAAQICQTPM AAISLVEDRRQWFKAEVGLGIRETPIDASVCATTVLAPGLTIVPDMILDARFATNPLIASCPYLRFYAGARLETPDGLPL GSLCVLDRNPRPGLSSEQASALMTLSRQVTNQLELRRTVIERDEALSRVRQTETRQHLLVRELHHRTRNNLAVLQALFGV TTRASGSVDELYRSFADRIASLARTQALLSDDYWQTARLHDMLAHEFEWHIKHRNGRVVLDGPELDLAADLAVPFGMALH ELRSNAERHGALSSADGKVEVKWSLIRQDGKRLLHLNWSEQGGPRARKPFRAGVGMKIQRMLEVQCGAEVKTEFLTEGLH VSITAPLIEARLVPEY
Sequences:
>Translated_416_residues MPEAGIWRKRLPRLNPGLSCVVAVYPALRVPRVAGASECAAWDEEKRLAALRAYQVLDTPNEDGFDEIVQLAAQICQTPM AAISLVEDRRQWFKAEVGLGIRETPIDASVCATTVLAPGLTIVPDMILDARFATNPLIASCPYLRFYAGARLETPDGLPL GSLCVLDRNPRPGLSSEQASALMTLSRQVTNQLELRRTVIERDEALSRVRQTETRQHLLVRELHHRTRNNLAVLQALFGV TTRASGSVDELYRSFADRIASLARTQALLSDDYWQTARLHDMLAHEFEWHIKHRNGRVVLDGPELDLAADLAVPFGMALH ELRSNAERHGALSSADGKVEVKWSLIRQDGKRLLHLNWSEQGGPRARKPFRAGVGMKIQRMLEVQCGAEVKTEFLTEGLH VSITAPLIEARLVPEY >Mature_415_residues PEAGIWRKRLPRLNPGLSCVVAVYPALRVPRVAGASECAAWDEEKRLAALRAYQVLDTPNEDGFDEIVQLAAQICQTPMA AISLVEDRRQWFKAEVGLGIRETPIDASVCATTVLAPGLTIVPDMILDARFATNPLIASCPYLRFYAGARLETPDGLPLG SLCVLDRNPRPGLSSEQASALMTLSRQVTNQLELRRTVIERDEALSRVRQTETRQHLLVRELHHRTRNNLAVLQALFGVT TRASGSVDELYRSFADRIASLARTQALLSDDYWQTARLHDMLAHEFEWHIKHRNGRVVLDGPELDLAADLAVPFGMALHE LRSNAERHGALSSADGKVEVKWSLIRQDGKRLLHLNWSEQGGPRARKPFRAGVGMKIQRMLEVQCGAEVKTEFLTEGLHV SITAPLIEARLVPEY
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46349; Mature: 46218
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAGIWRKRLPRLNPGLSCVVAVYPALRVPRVAGASECAAWDEEKRLAALRAYQVLDTP CCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC NEDGFDEIVQLAAQICQTPMAAISLVEDRRQWFKAEVGLGIRETPIDASVCATTVLAPGL CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC TIVPDMILDARFATNPLIASCPYLRFYAGARLETPDGLPLGSLCVLDRNPRPGLSSEQAS HHHHHHHHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH ALMTLSRQVTNQLELRRTVIERDEALSRVRQTETRQHLLVRELHHRTRNNLAVLQALFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH TTRASGSVDELYRSFADRIASLARTQALLSDDYWQTARLHDMLAHEFEWHIKHRNGRVVL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEE DGPELDLAADLAVPFGMALHELRSNAERHGALSSADGKVEVKWSLIRQDGKRLLHLNWSE ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCEEEEEECCC QGGPRARKPFRAGVGMKIQRMLEVQCGAEVKTEFLTEGLHVSITAPLIEARLVPEY CCCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHCCCCCCC >Mature Secondary Structure PEAGIWRKRLPRLNPGLSCVVAVYPALRVPRVAGASECAAWDEEKRLAALRAYQVLDTP CCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC NEDGFDEIVQLAAQICQTPMAAISLVEDRRQWFKAEVGLGIRETPIDASVCATTVLAPGL CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC TIVPDMILDARFATNPLIASCPYLRFYAGARLETPDGLPLGSLCVLDRNPRPGLSSEQAS HHHHHHHHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH ALMTLSRQVTNQLELRRTVIERDEALSRVRQTETRQHLLVRELHHRTRNNLAVLQALFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH TTRASGSVDELYRSFADRIASLARTQALLSDDYWQTARLHDMLAHEFEWHIKHRNGRVVL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEE DGPELDLAADLAVPFGMALHELRSNAERHGALSSADGKVEVKWSLIRQDGKRLLHLNWSE ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCEEEEEECCC QGGPRARKPFRAGVGMKIQRMLEVQCGAEVKTEFLTEGLHVSITAPLIEARLVPEY CCCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA