| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914773
Identifier: 220914773
GI number: 220914773
Start: 130527
End: 131762
Strand: Reverse
Name: 220914773
Synonym: Mnod_7901
Alternate gene names: NA
Gene position: 131762-130527 (Counterclockwise)
Preceding gene: 220914778
Following gene: 220914768
Centisome position: 28.76
GC content: 75.0
Gene sequence:
>1236_bases GTGAGAAGCCCTTACGCCATAGACGAGCTCTTCACCGGTTCGACTTGGCGCCGGCTCGCCGGTCCGGCCGAGCGCGCGGC CGAGGCGCTCCTGCGCCTGGACGAGCGCCTCGCCCGCACGGAGCCGGCGCTCGCCGACGGCGTGAGGGCGCGCGCGCACT TCGTCGACGCTCAGGCCGCGCTCGGGCTCGAAGGTCGGCTCGTGCTCATGGAGGACCTCGTCCTGCACGACGCCGCCATG CCCGTGCGCCAGCCAACCCCGGAGCTCGCCCGGGCCATGCACGTCCTCGCGATCCGCCGCCGGATCGCCGCGGCGCGCCC GGACTGGCCCTTCGCGCGCGAGGGCTGGTCCGCCCTGTTCGGAGCCGTGGGACGCGATCCCGACGGAACGGAAGCACCGC TCGAGAGCCCACGGGTGGAGGCGCCGCGCCGCGGTGACGCCACCGAGCCGCAACCCTGGGCCATGCCGCGCTTCGGGCAG GATTCGTTCGACGACGAGGACGACGGGGCCACCAGCTCAGGTGATGAGGATGAGCTCTGGACAGCGGACGAAGCCAGCGA TCCGGCCTTCGCCGGCATCGACCGCCTGCTCGCCCGCAGCCGGCGCACCCTCGCCGACTACAACGACCTGACCACGGATG AGGGCCGGGCCGCGCTTCGGGTGCGCGATCCGCAGTACGGGGAAGCCGAACGGCTGGCGGCCTGGCGGCGGATCGCCCTC AAGGACGTGCGGGAGCTGCCGGCGGTTCTCGCCGCCGCGGTCGTGCTCGACGCCTGGTTCGTCCTGGACCCGTCCGAGCG CCAGCCCTTCCTCGGTCCCCTCCTCGCGGCCGCCCTCCTCCATCAGCGCGGGACGGCGCGCCATCACCTCCCTGCCCTCG CGCTCGGCCTGCGCGAGAGCCGGACGCGGTGGCTGACGGTGCACCCCGCGCCCGAGCGCCTCGGCGCGATCCTGCGCGCC GCCGAGGCGGCGGCACACGCCGCCTCGCGCGATCTCGACCGGCTGAGCCTCGCCCGCGCGCTGATGCTGCGCCGGGTGCA GGCCAAGCGCCGCACCTCGCGGCTGCCGCAACTCGTGGAGGTGTTCCTGGCGAGCCCGCTGGTCACGGTCCAGAGCGCGG CCCAGCGGCTGGGAACCTCAGCCCAGGTGGTCGAGGCCATGCTGACCGGTCTCGGGCCGGCCTGCCCGCGCGAGCTGACC GGGCGCAGGCGCTACCGGGCCTGGGGCATCGTGTGA
Upstream 100 bases:
>100_bases TGAGGGTGTTTGGCGGGGTGTTTCGGTGCGGCCACGGACCATTCCTGAGTGAACCAAGTGATAGTGCGATTCGCTTGGTT CACGTATCATCAACCACATC
Downstream 100 bases:
>100_bases GGCGCGCGCCGCGAGGCTCAACGTGAGCGTGAGGCTCCGGTGCACCGCCGAACACCGCGACCGCGACCTTGAAGTGGGCC CCTTCAGGTGGACAGGTTCG
Product: protein of unknown function DUF1612
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRSPYAIDELFTGSTWRRLAGPAERAAEALLRLDERLARTEPALADGVRARAHFVDAQAALGLEGRLVLMEDLVLHDAAM PVRQPTPELARAMHVLAIRRRIAAARPDWPFAREGWSALFGAVGRDPDGTEAPLESPRVEAPRRGDATEPQPWAMPRFGQ DSFDDEDDGATSSGDEDELWTADEASDPAFAGIDRLLARSRRTLADYNDLTTDEGRAALRVRDPQYGEAERLAAWRRIAL KDVRELPAVLAAAVVLDAWFVLDPSERQPFLGPLLAAALLHQRGTARHHLPALALGLRESRTRWLTVHPAPERLGAILRA AEAAAHAASRDLDRLSLARALMLRRVQAKRRTSRLPQLVEVFLASPLVTVQSAAQRLGTSAQVVEAMLTGLGPACPRELT GRRRYRAWGIV
Sequences:
>Translated_411_residues MRSPYAIDELFTGSTWRRLAGPAERAAEALLRLDERLARTEPALADGVRARAHFVDAQAALGLEGRLVLMEDLVLHDAAM PVRQPTPELARAMHVLAIRRRIAAARPDWPFAREGWSALFGAVGRDPDGTEAPLESPRVEAPRRGDATEPQPWAMPRFGQ DSFDDEDDGATSSGDEDELWTADEASDPAFAGIDRLLARSRRTLADYNDLTTDEGRAALRVRDPQYGEAERLAAWRRIAL KDVRELPAVLAAAVVLDAWFVLDPSERQPFLGPLLAAALLHQRGTARHHLPALALGLRESRTRWLTVHPAPERLGAILRA AEAAAHAASRDLDRLSLARALMLRRVQAKRRTSRLPQLVEVFLASPLVTVQSAAQRLGTSAQVVEAMLTGLGPACPRELT GRRRYRAWGIV >Mature_411_residues MRSPYAIDELFTGSTWRRLAGPAERAAEALLRLDERLARTEPALADGVRARAHFVDAQAALGLEGRLVLMEDLVLHDAAM PVRQPTPELARAMHVLAIRRRIAAARPDWPFAREGWSALFGAVGRDPDGTEAPLESPRVEAPRRGDATEPQPWAMPRFGQ DSFDDEDDGATSSGDEDELWTADEASDPAFAGIDRLLARSRRTLADYNDLTTDEGRAALRVRDPQYGEAERLAAWRRIAL KDVRELPAVLAAAVVLDAWFVLDPSERQPFLGPLLAAALLHQRGTARHHLPALALGLRESRTRWLTVHPAPERLGAILRA AEAAAHAASRDLDRLSLARALMLRRVQAKRRTSRLPQLVEVFLASPLVTVQSAAQRLGTSAQVVEAMLTGLGPACPRELT GRRRYRAWGIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011670 - InterPro: IPR021068 [H]
Pfam domain/function: PF07756 DUF1612; PF11972 HTH_13 [H]
EC number: NA
Molecular weight: Translated: 45236; Mature: 45236
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPYAIDELFTGSTWRRLAGPAERAAEALLRLDERLARTEPALADGVRARAHFVDAQAA CCCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGLEGRLVLMEDLVLHDAAMPVRQPTPELARAMHVLAIRRRIAAARPDWPFAREGWSALF CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GAVGRDPDGTEAPLESPRVEAPRRGDATEPQPWAMPRFGQDSFDDEDDGATSSGDEDELW HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TADEASDPAFAGIDRLLARSRRTLADYNDLTTDEGRAALRVRDPQYGEAERLAAWRRIAL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH KDVRELPAVLAAAVVLDAWFVLDPSERQPFLGPLLAAALLHQRGTARHHLPALALGLRES HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC RTRWLTVHPAPERLGAILRAAEAAAHAASRDLDRLSLARALMLRRVQAKRRTSRLPQLVE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLASPLVTVQSAAQRLGTSAQVVEAMLTGLGPACPRELTGRRRYRAWGIV HHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCCC >Mature Secondary Structure MRSPYAIDELFTGSTWRRLAGPAERAAEALLRLDERLARTEPALADGVRARAHFVDAQAA CCCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGLEGRLVLMEDLVLHDAAMPVRQPTPELARAMHVLAIRRRIAAARPDWPFAREGWSALF CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GAVGRDPDGTEAPLESPRVEAPRRGDATEPQPWAMPRFGQDSFDDEDDGATSSGDEDELW HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TADEASDPAFAGIDRLLARSRRTLADYNDLTTDEGRAALRVRDPQYGEAERLAAWRRIAL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH KDVRELPAVLAAAVVLDAWFVLDPSERQPFLGPLLAAALLHQRGTARHHLPALALGLRES HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC RTRWLTVHPAPERLGAILRAAEAAAHAASRDLDRLSLARALMLRRVQAKRRTSRLPQLVE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLASPLVTVQSAAQRLGTSAQVVEAMLTGLGPACPRELTGRRRYRAWGIV HHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]