| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is ydeG [H]
Identifier: 220914748
GI number: 220914748
Start: 96123
End: 97355
Strand: Reverse
Name: ydeG [H]
Synonym: Mnod_7862
Alternate gene names: 220914748
Gene position: 97355-96123 (Counterclockwise)
Preceding gene: 220914749
Following gene: 220914747
Centisome position: 21.25
GC content: 71.21
Gene sequence:
>1233_bases ATGTCCCAAGCTGCCATCGAACCGGCGCCTAAGCTCGCGCCCGCTCTCCCTGCGCGGTCCGGAACGGGCAACGTGGCCCG GCTGGCGATCGCCCAGGCGCTCGCCGGCGCGAACTCGACGGTCGTCTACGCGACCGGCGCCATCGTCGGCAACATGCTGG CGCCGAGCCCGGTCCTGGCGACGCTGCCGATCTCGATCTTCGTGGTGGGCATGGCCGCCTGCACCCTGCCGGCCGGCGCC ATCGCCCGCCGCCACGGTCGCCGCGCCGCGTTCCTGGCCGGGACGGGATGCGGCGTGCTCGTCGGCCTGCTGTCCGCCCT CGCCATTGTGTCGGGCTCGTTCTGGCTGTTCTGCGCGGCAACGTTCTTCGGCGGTGCCTACGCCGCCGTCGTCCTCTCCT TCCGCTTCGCCGCAGCGGATTGCGTGTCGCCAGAGCAGCGCCCGCGGGCCCTGTCCGCCGTCATGGCGGGCGGCGTGTTC GCCGGGGTGATCGGCCCGCAGCTCGTCACCCACACCATGGACCTATGGCCGCCCTACCTGTTCGCCGCGACCTTCCTGGC CCAAGCCGTGGTGGCGGCCGTGTCGGCTCTCGTCCTGCTCGGCGTCCGGCTCCCGATGCCGAGCGCGGCGGAGACGTCCA GGGGGCGCCCGCTCGGCGCAATAGCGCGCCAGCCCCGCTTCATCACCGCCGTGATCTGCGGGGTGGTCTCCTACCTGCTC ATGAACTTTCTCATGACGGCCGCCCCGTTGGCGATGCACCTGTGCGGCCTGTCGCAGGAGGACGCGAACCTCGGCCTGCA ATGGCACGTGATCGCGATGTACGCCCCGAGCTTCGTCACCGGGCGGCTGATCGCGCGCTTCGGTGCGCCGCGGGTGGTGG CGGCCGGGCTCGCCCTGACCGCCGCCTCGGCCGCCGTCGGGCTCGCCGGCGTGGACGTGGCACATTTCTGGCTGACCCTG GTCCTGCTCGGCGTCGGCTGGAACTTCGGCTTCGTCGGCGCCTCGGCCCTGGTGCTGGAGTGCCACCGTCCCGAGGAGCG GACGCGGGTGCAGTCGCTCAACGACTTCATCGTGTTCGGAACGATGGCCTTGGGCTCGTTCTCCTCCGGAGGCCTGCTGG CGAGCTACGGCTGGGACGTAGTGCTCTGGATCTCATTTCTGCCCATCCTACTCGCGGTCGGCGCGCTCGTCTGGACAGCG GCTGTGCGCACCACGAACACCCGGCTGGGATAA
Upstream 100 bases:
>100_bases AGGCCGCCAAGGCCCGCGCCCTGCTCGACCGGCGCCTGCACCGCCGCCCGTCGCCGCGCGACACGCGCTGGCACACCCTT CTCATGGCCTGAGAGAGTCC
Downstream 100 bases:
>100_bases TAATTAAAAGAACGCTAAAGCGTGACAGTGACGGTTACGTGAAAGCCTAGTTATATGATCAGCCCGTCTGCACTCCTGCC GTTTTGTGCTGCCGTGCTCG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSQAAIEPAPKLAPALPARSGTGNVARLAIAQALAGANSTVVYATGAIVGNMLAPSPVLATLPISIFVVGMAACTLPAGA IARRHGRRAAFLAGTGCGVLVGLLSALAIVSGSFWLFCAATFFGGAYAAVVLSFRFAAADCVSPEQRPRALSAVMAGGVF AGVIGPQLVTHTMDLWPPYLFAATFLAQAVVAAVSALVLLGVRLPMPSAAETSRGRPLGAIARQPRFITAVICGVVSYLL MNFLMTAAPLAMHLCGLSQEDANLGLQWHVIAMYAPSFVTGRLIARFGAPRVVAAGLALTAASAAVGLAGVDVAHFWLTL VLLGVGWNFGFVGASALVLECHRPEERTRVQSLNDFIVFGTMALGSFSSGGLLASYGWDVVLWISFLPILLAVGALVWTA AVRTTNTRLG
Sequences:
>Translated_410_residues MSQAAIEPAPKLAPALPARSGTGNVARLAIAQALAGANSTVVYATGAIVGNMLAPSPVLATLPISIFVVGMAACTLPAGA IARRHGRRAAFLAGTGCGVLVGLLSALAIVSGSFWLFCAATFFGGAYAAVVLSFRFAAADCVSPEQRPRALSAVMAGGVF AGVIGPQLVTHTMDLWPPYLFAATFLAQAVVAAVSALVLLGVRLPMPSAAETSRGRPLGAIARQPRFITAVICGVVSYLL MNFLMTAAPLAMHLCGLSQEDANLGLQWHVIAMYAPSFVTGRLIARFGAPRVVAAGLALTAASAAVGLAGVDVAHFWLTL VLLGVGWNFGFVGASALVLECHRPEERTRVQSLNDFIVFGTMALGSFSSGGLLASYGWDVVLWISFLPILLAVGALVWTA AVRTTNTRLG >Mature_409_residues SQAAIEPAPKLAPALPARSGTGNVARLAIAQALAGANSTVVYATGAIVGNMLAPSPVLATLPISIFVVGMAACTLPAGAI ARRHGRRAAFLAGTGCGVLVGLLSALAIVSGSFWLFCAATFFGGAYAAVVLSFRFAAADCVSPEQRPRALSAVMAGGVFA GVIGPQLVTHTMDLWPPYLFAATFLAQAVVAAVSALVLLGVRLPMPSAAETSRGRPLGAIARQPRFITAVICGVVSYLLM NFLMTAAPLAMHLCGLSQEDANLGLQWHVIAMYAPSFVTGRLIARFGAPRVVAAGLALTAASAAVGLAGVDVAHFWLTLV LLGVGWNFGFVGASALVLECHRPEERTRVQSLNDFIVFGTMALGSFSSGGLLASYGWDVVLWISFLPILLAVGALVWTAA VRTTNTRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42216; Mature: 42085
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAAIEPAPKLAPALPARSGTGNVARLAIAQALAGANSTVVYATGAIVGNMLAPSPVLA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCHHH TLPISIFVVGMAACTLPAGAIARRHGRRAAFLAGTGCGVLVGLLSALAIVSGSFWLFCAA HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH TFFGGAYAAVVLSFRFAAADCVSPEQRPRALSAVMAGGVFAGVIGPQLVTHTMDLWPPYL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FAATFLAQAVVAAVSALVLLGVRLPMPSAAETSRGRPLGAIARQPRFITAVICGVVSYLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH MNFLMTAAPLAMHLCGLSQEDANLGLQWHVIAMYAPSFVTGRLIARFGAPRVVAAGLALT HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHH AASAAVGLAGVDVAHFWLTLVLLGVGWNFGFVGASALVLECHRPEERTRVQSLNDFIVFG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHEEH TMALGSFSSGGLLASYGWDVVLWISFLPILLAVGALVWTAAVRTTNTRLG HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQAAIEPAPKLAPALPARSGTGNVARLAIAQALAGANSTVVYATGAIVGNMLAPSPVLA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCHHH TLPISIFVVGMAACTLPAGAIARRHGRRAAFLAGTGCGVLVGLLSALAIVSGSFWLFCAA HHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH TFFGGAYAAVVLSFRFAAADCVSPEQRPRALSAVMAGGVFAGVIGPQLVTHTMDLWPPYL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FAATFLAQAVVAAVSALVLLGVRLPMPSAAETSRGRPLGAIARQPRFITAVICGVVSYLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH MNFLMTAAPLAMHLCGLSQEDANLGLQWHVIAMYAPSFVTGRLIARFGAPRVVAAGLALT HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHH AASAAVGLAGVDVAHFWLTLVLLGVGWNFGFVGASALVLECHRPEERTRVQSLNDFIVFG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHEEH TMALGSFSSGGLLASYGWDVVLWISFLPILLAVGALVWTAAVRTTNTRLG HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]