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The map label for this gene is iolB [H]

Identifier: 220914693

GI number: 220914693

Start: 30107

End: 30922

Strand: Reverse

Name: iolB [H]

Synonym: Mnod_7801

Alternate gene names: 220914693

Gene position: 30922-30107 (Counterclockwise)

Preceding gene: 220914694

Following gene: 220914692

Centisome position: 6.75

GC content: 65.2

Gene sequence:

>816_bases
ATGATGGCAAACCTGTTACGCCGACCCTTTGGTGCGCACGGCAAGGTGCACGAGATCACGCCGCATTCGGCGGGCTGGCG
CTATGTGGGCTTCTCGCTCTACCGGCTGCGGCCGGGCGAGACGGTGGGCGAGGCGACCGGCGCCATGGAGGCGATCCTCG
TCATGGTCGAGGGCAAGGCCGCCGTCACGGCTGCCGGCAACGACTGGGGCGAGCTCGGCGACCGCATGGACGTGTTCGAG
AAGACGCCGCCGCATTGCCTCTACATCCCGAATGGCGAAAACTGGACTGCCGTCGCCATCACCGACTGCACGATCGGCGT
TTGTCTCGCGCCGGGCCAAAGCGGACATGCGGCGCGGCGGATCGGGCCCGAGGGCATCACGCTGACCCGGCGCGGCCAGG
GGTCGAACACCCGCTTCATCAACAACATCGCTATGGAGGCCGAGGATTATTGCGACAGCCTGCTGGTGACCGAGGTATTC
ACGCCGGCGGGTCACTGGTCGTCCTATCCCTCGCACCGCCATGACGAGGACGACTATCCGCGCATCACCTATCTCGAGGA
GACCTACTATCACCGCCTCAACCCGGCGCAGGGGTTCGGGATCCAGCGGGTCTATACCGACGATGGCAGCCTCGACGAGA
CCATGGCGGTGCACAATCACGACGTGGTGCTGGTGCCACGCGGTCACCACCCTTGCGCGGCCGCCCATGGATACGAGATG
TACTATCTCAATGTCATGGCGGGCCCCTTGCGCCAATGGCGCTTCGAGCCCGATCCGGCGCATCGCTGGCTTCTGGAAGG
CGAGGCCAAGACATAA

Upstream 100 bases:

>100_bases
CGACTGACGGGATCGGGGCGCCCCGACGCGTCGGGCCCATCCGGAACGAGGCCGGACGAGCGCAGGCGCACTGGTCCAAG
CCGTGGCCGACGGAGATCAT

Downstream 100 bases:

>100_bases
GGGCAGCGCAGCACGGCCCTAAGCAGGTTTCGGAACAGTGCCTTGCGGTTTTCCGAAAAAACCTGCGACACATCAAAAAT
CTAGAGCATTTTCCGACGAA

Product: Myo-inositol catabolism IolB domain protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MMANLLRRPFGAHGKVHEITPHSAGWRYVGFSLYRLRPGETVGEATGAMEAILVMVEGKAAVTAAGNDWGELGDRMDVFE
KTPPHCLYIPNGENWTAVAITDCTIGVCLAPGQSGHAARRIGPEGITLTRRGQGSNTRFINNIAMEAEDYCDSLLVTEVF
TPAGHWSSYPSHRHDEDDYPRITYLEETYYHRLNPAQGFGIQRVYTDDGSLDETMAVHNHDVVLVPRGHHPCAAAHGYEM
YYLNVMAGPLRQWRFEPDPAHRWLLEGEAKT

Sequences:

>Translated_271_residues
MMANLLRRPFGAHGKVHEITPHSAGWRYVGFSLYRLRPGETVGEATGAMEAILVMVEGKAAVTAAGNDWGELGDRMDVFE
KTPPHCLYIPNGENWTAVAITDCTIGVCLAPGQSGHAARRIGPEGITLTRRGQGSNTRFINNIAMEAEDYCDSLLVTEVF
TPAGHWSSYPSHRHDEDDYPRITYLEETYYHRLNPAQGFGIQRVYTDDGSLDETMAVHNHDVVLVPRGHHPCAAAHGYEM
YYLNVMAGPLRQWRFEPDPAHRWLLEGEAKT
>Mature_271_residues
MMANLLRRPFGAHGKVHEITPHSAGWRYVGFSLYRLRPGETVGEATGAMEAILVMVEGKAAVTAAGNDWGELGDRMDVFE
KTPPHCLYIPNGENWTAVAITDCTIGVCLAPGQSGHAARRIGPEGITLTRRGQGSNTRFINNIAMEAEDYCDSLLVTEVF
TPAGHWSSYPSHRHDEDDYPRITYLEETYYHRLNPAQGFGIQRVYTDDGSLDETMAVHNHDVVLVPRGHHPCAAAHGYEM
YYLNVMAGPLRQWRFEPDPAHRWLLEGEAKT

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30219; Mature: 30219

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMANLLRRPFGAHGKVHEITPHSAGWRYVGFSLYRLRPGETVGEATGAMEAILVMVEGKA
CCHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCEEEEEEEEECCE
AVTAAGNDWGELGDRMDVFEKTPPHCLYIPNGENWTAVAITDCTIGVCLAPGQSGHAARR
EEEECCCCHHHHCCHHHHHHCCCCCEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHH
IGPEGITLTRRGQGSNTRFINNIAMEAEDYCDSLLVTEVFTPAGHWSSYPSHRHDEDDYP
CCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RITYLEETYYHRLNPAQGFGIQRVYTDDGSLDETMAVHNHDVVLVPRGHHPCAAAHGYEM
EEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEE
YYLNVMAGPLRQWRFEPDPAHRWLLEGEAKT
EEEEEECCHHHHCCCCCCHHHEEEEECCCCC
>Mature Secondary Structure
MMANLLRRPFGAHGKVHEITPHSAGWRYVGFSLYRLRPGETVGEATGAMEAILVMVEGKA
CCHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCEEEEEEEEECCE
AVTAAGNDWGELGDRMDVFEKTPPHCLYIPNGENWTAVAITDCTIGVCLAPGQSGHAARR
EEEECCCCHHHHCCHHHHHHCCCCCEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHH
IGPEGITLTRRGQGSNTRFINNIAMEAEDYCDSLLVTEVFTPAGHWSSYPSHRHDEDDYP
CCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RITYLEETYYHRLNPAQGFGIQRVYTDDGSLDETMAVHNHDVVLVPRGHHPCAAAHGYEM
EEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEE
YYLNVMAGPLRQWRFEPDPAHRWLLEGEAKT
EEEEEECCHHHHCCCCCCHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA