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The map label for this gene is sopA [C]

Identifier: 220914685

GI number: 220914685

Start: 16521

End: 17738

Strand: Reverse

Name: sopA [C]

Synonym: Mnod_7789

Alternate gene names: 220914685

Gene position: 17738-16521 (Counterclockwise)

Preceding gene: 220914687

Following gene: 220914684

Centisome position: 3.87

GC content: 63.63

Gene sequence:

>1218_bases
GTGGCAACAGCAGCAATCCGTACCAAACCGGGGCCGACATCCGACGACCGGGTCTCGGCGCACGCGCGGCTCCTTTCCTC
CCAGCTTCAAGGGTTACGCGAGCGGCTCTTCCCGCCCGAGTCACAAAAGGTCCTTCGTAAGTTCACTTCGGGTGAGGCTG
CGCGCCTGATCGGGGTTTCAGACAGTTACCTGCGGCAGCTCTCACTCGATGGCCAGGGGCCAGTCCCAGAGATGCTTCCG
AACGGCCGGCGTCTTTACACGCTGCGTCAGATCAATGAGCTGCGCCGTTTCATAGCGGAGACGAGGCCCAAGGAGGCGCG
TGCGGTTCTGCCTTTGCGGCGAGAGGGCGAGCGGCTCCAGACCCTCGCCTGCGTCAACTTCAAGGGCGGCTCCGCCAAGA
CCACTACAACGCTCTATCTTGCCCAATGGCTTGCCCTGCAGGGTTATCGCGTGCTCGCGCTCGACCTCGATCCGCAAGCC
TCACTGAGCGCAATGTTCGGCGTTCAGCCCGAGTTCGACCTCCGCTGGGGCGACACGCTCTATGGCGCGATCCGCTACGA
CGACAAGCGCCGGTCGCTGCGTGAAATCATCCGCCCAACCAATTTCGATGGGCTCGATCTCGTTCCAGGCAACCTCGAAC
TGATGGAGTTCGAACACGAGACGCCGCGGGAGCTCTCCGCCGGCCGCGTCTCATCGGGCGGTCTTTTTTTCCAGCGCGTC
GGGGCGGCACTCGCGGAGGTGCAGGACGCCTACGATCTCGTCGTCATCGATTGCCCCCCGCAGCTCGGCTACCTAACCCT
CGGCGCCGTGTGCGCGGCGACCTCGCTTCTCATCACGATCCATCCGCAAATGGTGGATGTCGCATCGATGTCGCAGTTCC
TTCTGATGACCTCGGACCTGATGAGTGTGGTGCGTAAGGCCGGGGGCGACCTCTCGCACGATTTCATTCGATACGTGGTG
ACGCGGCATGAGCCGCACGACGGGCCTCAGAGCCAGATCGTGGCGCTGTTGCGCAATCTCTTCGGCGACGAGGTGCTGGC
TGCGTCGGTCTGGAAGTCGACCGCGATCGCGGATGCTGGTCTGACCAAGCAGAGCCTCTACGAGCTTGAGCGCAACAGCG
TTGGCCGCGCGACATACGATCGCGCCATCGAGAGCCTCGAGGCGGTGCATCGCGAGATCCTGGGGTTGGTCCACCAAGCA
TGGGGGAGGGCGGCGTGA

Upstream 100 bases:

>100_bases
GATCTGTTAACCTTTAAGTTCTTGCCCGAATCGGGAAAGCATGGCTGTTTGAGACGGTTTCTGGCCGGTTTTGGCCGGAA
AACCGTTTCGGGGGCTACGC

Downstream 100 bases:

>100_bases
AGCGACGCGACGCGATCAAGAACCTCTACACTGCACCCCCTGAGCCGGAGAAGTTGGCCGTGGCCAACACGCGTGCTGTC
GTGGAGAATCCGCCGGAGCG

Product: plasmid partitioning protein RepA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MATAAIRTKPGPTSDDRVSAHARLLSSQLQGLRERLFPPESQKVLRKFTSGEAARLIGVSDSYLRQLSLDGQGPVPEMLP
NGRRLYTLRQINELRRFIAETRPKEARAVLPLRREGERLQTLACVNFKGGSAKTTTTLYLAQWLALQGYRVLALDLDPQA
SLSAMFGVQPEFDLRWGDTLYGAIRYDDKRRSLREIIRPTNFDGLDLVPGNLELMEFEHETPRELSAGRVSSGGLFFQRV
GAALAEVQDAYDLVVIDCPPQLGYLTLGAVCAATSLLITIHPQMVDVASMSQFLLMTSDLMSVVRKAGGDLSHDFIRYVV
TRHEPHDGPQSQIVALLRNLFGDEVLAASVWKSTAIADAGLTKQSLYELERNSVGRATYDRAIESLEAVHREILGLVHQA
WGRAA

Sequences:

>Translated_405_residues
MATAAIRTKPGPTSDDRVSAHARLLSSQLQGLRERLFPPESQKVLRKFTSGEAARLIGVSDSYLRQLSLDGQGPVPEMLP
NGRRLYTLRQINELRRFIAETRPKEARAVLPLRREGERLQTLACVNFKGGSAKTTTTLYLAQWLALQGYRVLALDLDPQA
SLSAMFGVQPEFDLRWGDTLYGAIRYDDKRRSLREIIRPTNFDGLDLVPGNLELMEFEHETPRELSAGRVSSGGLFFQRV
GAALAEVQDAYDLVVIDCPPQLGYLTLGAVCAATSLLITIHPQMVDVASMSQFLLMTSDLMSVVRKAGGDLSHDFIRYVV
TRHEPHDGPQSQIVALLRNLFGDEVLAASVWKSTAIADAGLTKQSLYELERNSVGRATYDRAIESLEAVHREILGLVHQA
WGRAA
>Mature_404_residues
ATAAIRTKPGPTSDDRVSAHARLLSSQLQGLRERLFPPESQKVLRKFTSGEAARLIGVSDSYLRQLSLDGQGPVPEMLPN
GRRLYTLRQINELRRFIAETRPKEARAVLPLRREGERLQTLACVNFKGGSAKTTTTLYLAQWLALQGYRVLALDLDPQAS
LSAMFGVQPEFDLRWGDTLYGAIRYDDKRRSLREIIRPTNFDGLDLVPGNLELMEFEHETPRELSAGRVSSGGLFFQRVG
AALAEVQDAYDLVVIDCPPQLGYLTLGAVCAATSLLITIHPQMVDVASMSQFLLMTSDLMSVVRKAGGDLSHDFIRYVVT
RHEPHDGPQSQIVALLRNLFGDEVLAASVWKSTAIADAGLTKQSLYELERNSVGRATYDRAIESLEAVHREILGLVHQAW
GRAA

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR017818 [H]

Pfam domain/function: PF01656 CbiA; PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 44869; Mature: 44738

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAAIRTKPGPTSDDRVSAHARLLSSQLQGLRERLFPPESQKVLRKFTSGEAARLIGVS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECC
DSYLRQLSLDGQGPVPEMLPNGRRLYTLRQINELRRFIAETRPKEARAVLPLRREGERLQ
HHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHEECCHHHCCCCEE
TLACVNFKGGSAKTTTTLYLAQWLALQGYRVLALDLDPQASLSAMFGVQPEFDLRWGDTL
EEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCE
YGAIRYDDKRRSLREIIRPTNFDGLDLVPGNLELMEFEHETPRELSAGRVSSGGLFFQRV
EEEEEECHHHHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHH
GAALAEVQDAYDLVVIDCPPQLGYLTLGAVCAATSLLITIHPQMVDVASMSQFLLMTSDL
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
MSVVRKAGGDLSHDFIRYVVTRHEPHDGPQSQIVALLRNLFGDEVLAASVWKSTAIADAG
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
LTKQSLYELERNSVGRATYDRAIESLEAVHREILGLVHQAWGRAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATAAIRTKPGPTSDDRVSAHARLLSSQLQGLRERLFPPESQKVLRKFTSGEAARLIGVS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECC
DSYLRQLSLDGQGPVPEMLPNGRRLYTLRQINELRRFIAETRPKEARAVLPLRREGERLQ
HHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHEECCHHHCCCCEE
TLACVNFKGGSAKTTTTLYLAQWLALQGYRVLALDLDPQASLSAMFGVQPEFDLRWGDTL
EEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCE
YGAIRYDDKRRSLREIIRPTNFDGLDLVPGNLELMEFEHETPRELSAGRVSSGGLFFQRV
EEEEEECHHHHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCCHHCCCCCCCCCHHHHHH
GAALAEVQDAYDLVVIDCPPQLGYLTLGAVCAATSLLITIHPQMVDVASMSQFLLMTSDL
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
MSVVRKAGGDLSHDFIRYVVTRHEPHDGPQSQIVALLRNLFGDEVLAASVWKSTAIADAG
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
LTKQSLYELERNSVGRATYDRAIESLEAVHREILGLVHQAWGRAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]