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The map label for this gene is ybjZ [C]

Identifier: 220905367

GI number: 220905367

Start: 2536149

End: 2537537

Strand: Direct

Name: ybjZ [C]

Synonym: Ddes_2105

Alternate gene names: 220905367

Gene position: 2536149-2537537 (Clockwise)

Preceding gene: 220905366

Following gene: 220905368

Centisome position: 88.26

GC content: 62.56

Gene sequence:

>1389_bases
ATGAACATCGTCACCATCCCCCTGCGCTGCCTGCGGCAGAAATGGGGGCGCTCCGCCGCCCTGCTCTCGGTTTTTCTTCT
TGGCGTGGCTGCCATTACGGCACTCAACAATGTTTCTTCTTCCGTAGCCGAAGGCTTTGAAAAAAAGCTCAGCGCCTACG
GGGCCAATATCGCCATCACGCCCAAGCGTGAAAGCCTGCAGATATCCTATGGCGGCATCCCGCTGGGCAACGCGCTGGTA
GACAGCGGACACATCCCCCTGGCCGGAACACTGCGCGCCATCGCGGACATCCCTCTCAAGGACAGGATATCCGTTGTGGC
CCCAAAGCTCGCCGGGCTGACCTCGTTTGCCGCACGGGCCGATGCCCCCGCCGCCCTTGTACCGCTTGTGGGCGTGGACT
TTTCCAGCGAGCTTGATCTCAAGCAGTTCTGGCGCGTACAGGGGGCCATCCCCGGTATCGGGAACATGCATGCCCCGGAT
CCGCTCATGCGCAGCATGGAGCAAGAACACGCCCGCCACACAGCCACAACGGGCGCCGACGCAAAGCCTGCGGGCGTCAT
GACCGCAATGGCGGGCACCCCGCCTGAAGGGCATGGCATGTCCAGCCACGAAGAACACGCCGCAGACAGCCAGCCTCCCG
CAGGAGCAGGCGGAACATTTTCTGCTGAACACCGCTTGCTGGCCGGGGCGTCTCTTGCACGGCGCCTGAACCTTGCCCCG
GGGCAGACCGTTCTGCTCAGCGGCGAGCCTTTTCTGGTTGAGGGGGTGCTTCAGCCCACAGGCAGCGATGATGACAGCGT
GCTTTTTGCGCCCATCGGCATGGCACAGCAGCTTTTCAATGCGCCCGATGCCGCCAGCTTTATCGAGGTGGCCGCGCTCT
GCTCCGGTTGCCCCATTGAAGACATCGTGAGCGAACTGGAAGCCGCCCTGCCGGGGCAGGACATCCGCGCTCTGCGGCAG
GTGGTGGCGCAGCGCATGTATTCCATATCCTTTGCCCAGAACATGGCCCTTGTGGTCACAGTGGTCATTCTTTTTTCCGC
CTGTGTGATGGTGGTCATGTCCATGCTTGTTTCCGTCAACGAGCGGCGCAAAGAAATCGGCCTGCTCCGCGCTGTGGGTT
TTTCTCGCCAGGCGGTCTTTTTTATTTTCGCGGCTGAAGCCCTCGTCATCGGTTTTCTGGCAGGCGCCTTCGGCTATACA
GCCGGATATCTGGCAGGGGGCAAGGTTCTGGCCGCCATGCAGATTGAAGCCGCCGCCTATCCGGCCTTTTCCCTGACCGC
CATGTTCGGCTACGGCCTGCTTGCCGGAAGCCTGGCGGTGCTTGCCGCCGCCTTTCCCGCCTGCAAGGCCGCCCGCGCCA
ATCCGGCGGCAGCGCTTACTTCGCTGTAG

Upstream 100 bases:

>100_bases
CAATCCTCACCCTGTAAGTTTTACGGTTTCGGGAGATGCCGTTGTTATCCCGGCAGCGGAGCTGCGGGACGGCGTCAGAT
TTTTCAGGAGCCTGTAGCCT

Downstream 100 bases:

>100_bases
CCGCACAAGAGGATGAGTACATGCTTGAAGCAATTGACATAGTCAAATCATATAGCGCAGGCGGCGTGTCTGCCCCGGTG
CTGCGCGGCGTGAACCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNIVTIPLRCLRQKWGRSAALLSVFLLGVAAITALNNVSSSVAEGFEKKLSAYGANIAITPKRESLQISYGGIPLGNALV
DSGHIPLAGTLRAIADIPLKDRISVVAPKLAGLTSFAARADAPAALVPLVGVDFSSELDLKQFWRVQGAIPGIGNMHAPD
PLMRSMEQEHARHTATTGADAKPAGVMTAMAGTPPEGHGMSSHEEHAADSQPPAGAGGTFSAEHRLLAGASLARRLNLAP
GQTVLLSGEPFLVEGVLQPTGSDDDSVLFAPIGMAQQLFNAPDAASFIEVAALCSGCPIEDIVSELEAALPGQDIRALRQ
VVAQRMYSISFAQNMALVVTVVILFSACVMVVMSMLVSVNERRKEIGLLRAVGFSRQAVFFIFAAEALVIGFLAGAFGYT
AGYLAGGKVLAAMQIEAAAYPAFSLTAMFGYGLLAGSLAVLAAAFPACKAARANPAAALTSL

Sequences:

>Translated_462_residues
MNIVTIPLRCLRQKWGRSAALLSVFLLGVAAITALNNVSSSVAEGFEKKLSAYGANIAITPKRESLQISYGGIPLGNALV
DSGHIPLAGTLRAIADIPLKDRISVVAPKLAGLTSFAARADAPAALVPLVGVDFSSELDLKQFWRVQGAIPGIGNMHAPD
PLMRSMEQEHARHTATTGADAKPAGVMTAMAGTPPEGHGMSSHEEHAADSQPPAGAGGTFSAEHRLLAGASLARRLNLAP
GQTVLLSGEPFLVEGVLQPTGSDDDSVLFAPIGMAQQLFNAPDAASFIEVAALCSGCPIEDIVSELEAALPGQDIRALRQ
VVAQRMYSISFAQNMALVVTVVILFSACVMVVMSMLVSVNERRKEIGLLRAVGFSRQAVFFIFAAEALVIGFLAGAFGYT
AGYLAGGKVLAAMQIEAAAYPAFSLTAMFGYGLLAGSLAVLAAAFPACKAARANPAAALTSL
>Mature_462_residues
MNIVTIPLRCLRQKWGRSAALLSVFLLGVAAITALNNVSSSVAEGFEKKLSAYGANIAITPKRESLQISYGGIPLGNALV
DSGHIPLAGTLRAIADIPLKDRISVVAPKLAGLTSFAARADAPAALVPLVGVDFSSELDLKQFWRVQGAIPGIGNMHAPD
PLMRSMEQEHARHTATTGADAKPAGVMTAMAGTPPEGHGMSSHEEHAADSQPPAGAGGTFSAEHRLLAGASLARRLNLAP
GQTVLLSGEPFLVEGVLQPTGSDDDSVLFAPIGMAQQLFNAPDAASFIEVAALCSGCPIEDIVSELEAALPGQDIRALRQ
VVAQRMYSISFAQNMALVVTVVILFSACVMVVMSMLVSVNERRKEIGLLRAVGFSRQAVFFIFAAEALVIGFLAGAFGYT
AGYLAGGKVLAAMQIEAAAYPAFSLTAMFGYGLLAGSLAVLAAAFPACKAARANPAAALTSL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47879; Mature: 47879

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVTIPLRCLRQKWGRSAALLSVFLLGVAAITALNNVSSSVAEGFEKKLSAYGANIAIT
CCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PKRESLQISYGGIPLGNALVDSGHIPLAGTLRAIADIPLKDRISVVAPKLAGLTSFAARA
CCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DAPAALVPLVGVDFSSELDLKQFWRVQGAIPGIGNMHAPDPLMRSMEQEHARHTATTGAD
CCCCHHHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AKPAGVMTAMAGTPPEGHGMSSHEEHAADSQPPAGAGGTFSAEHRLLAGASLARRLNLAP
CCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GQTVLLSGEPFLVEGVLQPTGSDDDSVLFAPIGMAQQLFNAPDAASFIEVAALCSGCPIE
CCEEEECCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCHH
DIVSELEAALPGQDIRALRQVVAQRMYSISFAQNMALVVTVVILFSACVMVVMSMLVSVN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERRKEIGLLRAVGFSRQAVFFIFAAEALVIGFLAGAFGYTAGYLAGGKVLAAMQIEAAAY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHC
PAFSLTAMFGYGLLAGSLAVLAAAFPACKAARANPAAALTSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MNIVTIPLRCLRQKWGRSAALLSVFLLGVAAITALNNVSSSVAEGFEKKLSAYGANIAIT
CCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PKRESLQISYGGIPLGNALVDSGHIPLAGTLRAIADIPLKDRISVVAPKLAGLTSFAARA
CCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DAPAALVPLVGVDFSSELDLKQFWRVQGAIPGIGNMHAPDPLMRSMEQEHARHTATTGAD
CCCCHHHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AKPAGVMTAMAGTPPEGHGMSSHEEHAADSQPPAGAGGTFSAEHRLLAGASLARRLNLAP
CCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GQTVLLSGEPFLVEGVLQPTGSDDDSVLFAPIGMAQQLFNAPDAASFIEVAALCSGCPIE
CCEEEECCCCEEEEEEECCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCHH
DIVSELEAALPGQDIRALRQVVAQRMYSISFAQNMALVVTVVILFSACVMVVMSMLVSVN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERRKEIGLLRAVGFSRQAVFFIFAAEALVIGFLAGAFGYTAGYLAGGKVLAAMQIEAAAY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHC
PAFSLTAMFGYGLLAGSLAVLAAAFPACKAARANPAAALTSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]