| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is asrB [H]
Identifier: 220905365
GI number: 220905365
Start: 2533809
End: 2534669
Strand: Direct
Name: asrB [H]
Synonym: Ddes_2103
Alternate gene names: 220905365
Gene position: 2533809-2534669 (Clockwise)
Preceding gene: 220905364
Following gene: 220905366
Centisome position: 88.18
GC content: 58.54
Gene sequence:
>861_bases ATGCTGCGTGAAATAACGGCCCGTCCGCAACCCACGGGCAACCCCTATCTGCCTATGACCGCCACCGTGGCTGAAGTTAT TCAGGAAACCGGCAATATCCGCACCCTGCGCGTGGTGCTGGACGATACCGAAACCATGAAGAATTTCGTTCACGAACCGG GGCAGGTGGGGCAACTTTCTGTTTTCGGCGCGGGCGAATCCACCTTTGTTATCAACTCGCCGCCGTCACAGAAAGACTAT CTGCAATTCTCGGTCATGCAGGCCGGAGAAGTGACCGCAGCCATCCACCGCCTGTCGCCCGGCGACAAGGTCGGTGTACG TGCACCGCTGGGTAACTTCTTTCCCTACAACGACTGGAAGGGCAAAGACGTCTTCTTTGTGGGTGGCGGCATCGGCATGG CCCCCATCCGCACCATCATGCTGCACGTGCTGGAAAACAGGAAAGACTACGGCAAGGTGAGCCTGCTTTACGGCGCGCGC ACCCCACGCGACATGGCCTTCAGCTACGAAGCAGAAGAATGGCTGCGCCGCGATGACCTGGACTGCACACTCTGCATCGA TGCGCCCTTTGAGGGTTGGGAACACAAAGTGGGCCTCATCCCTAACGTGCTCACCGAACTGAACCCCGACCCAAAAAACT GCGTGGCCGTGCTCTGCGGGCCGCCCATCATGATCAAGTTTACCGTGCAGGCGCTGGAAAAGCTGAACTTCGCCCCGGAA AACATCGTGACCACACTGGAAAAGCGCATGAAATGCGGCATCGGCATCTGCGGACGCTGCAATATCGGCGGGCGCTACGT CTGTGTGGACGGCCCGGTGTTTACCTGGAAAGAACTTCAGGAACTGCCGCCGGAACTGTAG
Upstream 100 bases:
>100_bases CCCCGCAGCCGCAGCCAAGGCCGCTGAAGTCCGGACCGAACAAAACGCTCCGGCTGCAGCCGCTGCCAAAACCGCACCCA AGGCTCCGGCCAAGGGCGGC
Downstream 100 bases:
>100_bases TTTCCTGCCAGTAATCCTTTTTTAATAATTCATTGCGAGAGAGGCCCCTTTTTGAAAAAAGGGGTCTCTCTCGCGCTCTC TCCACCAAAAACTTTTATAG
Product: oxidoreductase FAD/NAD(P)-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MLREITARPQPTGNPYLPMTATVAEVIQETGNIRTLRVVLDDTETMKNFVHEPGQVGQLSVFGAGESTFVINSPPSQKDY LQFSVMQAGEVTAAIHRLSPGDKVGVRAPLGNFFPYNDWKGKDVFFVGGGIGMAPIRTIMLHVLENRKDYGKVSLLYGAR TPRDMAFSYEAEEWLRRDDLDCTLCIDAPFEGWEHKVGLIPNVLTELNPDPKNCVAVLCGPPIMIKFTVQALEKLNFAPE NIVTTLEKRMKCGIGICGRCNIGGRYVCVDGPVFTWKELQELPPEL
Sequences:
>Translated_286_residues MLREITARPQPTGNPYLPMTATVAEVIQETGNIRTLRVVLDDTETMKNFVHEPGQVGQLSVFGAGESTFVINSPPSQKDY LQFSVMQAGEVTAAIHRLSPGDKVGVRAPLGNFFPYNDWKGKDVFFVGGGIGMAPIRTIMLHVLENRKDYGKVSLLYGAR TPRDMAFSYEAEEWLRRDDLDCTLCIDAPFEGWEHKVGLIPNVLTELNPDPKNCVAVLCGPPIMIKFTVQALEKLNFAPE NIVTTLEKRMKCGIGICGRCNIGGRYVCVDGPVFTWKELQELPPEL >Mature_286_residues MLREITARPQPTGNPYLPMTATVAEVIQETGNIRTLRVVLDDTETMKNFVHEPGQVGQLSVFGAGESTFVINSPPSQKDY LQFSVMQAGEVTAAIHRLSPGDKVGVRAPLGNFFPYNDWKGKDVFFVGGGIGMAPIRTIMLHVLENRKDYGKVSLLYGAR TPRDMAFSYEAEEWLRRDDLDCTLCIDAPFEGWEHKVGLIPNVLTELNPDPKNCVAVLCGPPIMIKFTVQALEKLNFAPE NIVTTLEKRMKCGIGICGRCNIGGRYVCVDGPVFTWKELQELPPEL
Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI84875541, Length=174, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24662938, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI281366101, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24662934, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012165 - InterPro: IPR019480 - InterPro: IPR017927 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 - InterPro: IPR014260 [H]
Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: NA
Molecular weight: Translated: 31732; Mature: 31732
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREITARPQPTGNPYLPMTATVAEVIQETGNIRTLRVVLDDTETMKNFVHEPGQVGQLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCCEEE VFGAGESTFVINSPPSQKDYLQFSVMQAGEVTAAIHRLSPGDKVGVRAPLGNFFPYNDWK EEECCCEEEEEECCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCC GKDVFFVGGGIGMAPIRTIMLHVLENRKDYGKVSLLYGARTPRDMAFSYEAEEWLRRDDL CCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHEEEECHHHHHHHCCC DCTLCIDAPFEGWEHKVGLIPNVLTELNPDPKNCVAVLCGPPIMIKFTVQALEKLNFAPE CEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHEEEEEECCCEEEEEEHHHHHHCCCCHH NIVTTLEKRMKCGIGICGRCNIGGRYVCVDGPVFTWKELQELPPEL HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCC >Mature Secondary Structure MLREITARPQPTGNPYLPMTATVAEVIQETGNIRTLRVVLDDTETMKNFVHEPGQVGQLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCCEEE VFGAGESTFVINSPPSQKDYLQFSVMQAGEVTAAIHRLSPGDKVGVRAPLGNFFPYNDWK EEECCCEEEEEECCCCCCHHEEEEECCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCC GKDVFFVGGGIGMAPIRTIMLHVLENRKDYGKVSLLYGARTPRDMAFSYEAEEWLRRDDL CCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHEEEECHHHHHHHCCC DCTLCIDAPFEGWEHKVGLIPNVLTELNPDPKNCVAVLCGPPIMIKFTVQALEKLNFAPE CEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHEEEEEECCCEEEEEEHHHHHHCCCCHH NIVTTLEKRMKCGIGICGRCNIGGRYVCVDGPVFTWKELQELPPEL HHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]